BAC Information

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BAC

Clone NameB6Ng01-047D21
Chromosome18 (Build37)
Map Location 21,860,683 - 22,017,672
singlet/doubletdoublet
Overlap gene4921528I01Rik
Upstream geneB4galt6, D030074E01Rik, Rnf125, Rnf138, Mep1b, EG622978, Gm944, LOC665722, LOC225264, Klhl14
Downstream geneLOC546708, LOC100040547, Asxl3, Nol4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047D21.bB6Ng01-047D21.g
ACCDH872160DH872161
length990907
definitionDH872160|Mus musculus domesticus DNA, BAC clone: B6Ng01-047D21, 5' end.DH872161|Mus musculus domesticus DNA, BAC clone: B6Ng01-047D21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,016,656 - 22,017,672)(21,860,683 - 21,861,596)
sequence
gaattctcttgtttacatttttctaaatctccaaatcaatgtagtaaatt
attcagggaaaaaaacttctcaaatgaaaccgtgacaagatgctgtggtt
cttaatattgctgaaggcaatgctaaaattgaaactaccttccagtgttg
gactgagtcccacacaccaatgaaaatcacccagagcaccttctccatgc
ttaagtcatgacagaggattgccctcttcacttcacttcaaaaagtcaag
ctcttagtcacttatattttgaaagcattcccaggcctttcctattacat
cactgaatcttcacttttctggactaagctaatgggtcagagggctaaca
catctctcacttcctattgctattctagaggttagtatttggatcctaag
tattcattaaataaaagtaataagtacttttatgttctaaacttcattct
taagtaagtccacatggaacctttcaaataatggtagacatcacagtaaa
agaaagaatgaaggattcaattttttaaaaaaagatacttaaatgataat
attaacagaactagttgccgggtccaacacagcccatagctctgctgggc
tgcccatctgtgcttgttttaggggccatacccctcccatgtttctatgt
aggatagtttttcatcccagctgacctcacagcaatggccatagctgcaa
ggacagggggtgggagggagttgaaatcctggctttcttgaattccagct
tgaggaacatggtaatatagaatctcataaataacagaaaaaataggaag
gaagtgggctgaatgaaatggttctggaaaccagtggtttgtagtttacc
tctggttcccctggacatggatattcagtaacatctagctactatgttaa
agacattctgctgatattgtctatgtgtagatagatggaagaactgtgca
gctagtatttagttagcatccatgaatccctgtgtgacta
gaattcattttcttgaataagaagggggattctttagatttagtagtttt
cgaaaaacaatcaccttcctcttgttttttaaaaaggcgttagggactct
cagcacttttgattcttgctggttcttgacatgagacaacccttctacgg
tagggttgtttctgccttgattagttttgagttgttaagttgtggaaatg
tgccacagaggaatgcctttatgaaaacaattgagtaagtcatttagaaa
gacctttatcctagtctatagccatacctgtatgcacccatcttatgtta
gaagctaagaagggtcaggcctggttaatacttggatgggagacaggact
gacgctaacttgagttttgccattgtggataagaatagctgcctggccac
attggaagggggttggttgttctgattagtttttgttaactagacacaat
cgtagacatccctggaaagaagaatctcaatggataaattgcctccatca
ggttggcctatagtcaagtctatggaggtgatttctgcctttcttttttt
tttttattagatatattttatttacatttcaaatgttatctcctttccta
gtttcccctctgataatcctctatcccctccccattcccctggtccccaa
cccacccactcccacttcctggccctggcattccccctatactgaggcat
agaagacccttcacaggacccaggacctctcctcccactgatggctgaca
aggccatcctctgctagatccgtgagtccctccatgtgttttctttgatt
ggtggtttagtctcaggtgagatctgggggttctggatagttcatactgt
tgttcctctaatgggctgcaaacccttcactctgggtacttaactcttct
tggggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22016656_22017672
seq2: B6Ng01-047D21.b_46_1035 (reverse)

seq1  TAGTCTACACAGGGGATTTCATGTGATGCTACAACTTAAATTACTAGCTG  50
      ||||| ||||||||   |||||| ||||||  ||||  || |||||||||
seq2  TAGTC-ACACAGGG--ATTCATG-GATGCT--AACT--AAATACTAGCTG  42

seq1  CACCAAGGTTTCTTCCAATCTTTATCTACAACATAGACATATTCAAGCCA  100
      |||  ||  ||||||||   | ||||||| |||||||||   |||   ||
seq2  CAC--AG--TTCTTCCA---TCTATCTAC-ACATAGACAATATCA--GCA  82

seq1  GAATGTCTTTTACCATTAGTAGCTAGATGTTACTGGAATATCCCATGTTC  150
      |||||||||| ||   |||||||||||||||||| |||||| ||||||  
seq2  GAATGTCTTTAAC--ATAGTAGCTAGATGTTACT-GAATAT-CCATGT--  126

seq1  CCAGGGGGAACCAGAGGTAAACTACAAACCCACTGGTTTCCAGAACCATT  200
      ||| |||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCA-GGGGAACCAGAGGTAAACTACAAA-CCACTGGTTTCCAGAACCATT  174

seq1  TCATTCAGCCCACTTCCTTTCCTATTTTTTCTGTTATTTATGAGATTCTA  250
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCATTCAGCCCACTTCC-TTCCTATTTTTTCTGTTATTTATGAGATTCTA  223

seq1  TTATTACCATGTTCCTCAAGCTGGAATTC-AGGAAGCCAGGATTTCAACT  299
       |||||||||||||||||||||||||||| || |||||||||||||||||
seq2  -TATTACCATGTTCCTCAAGCTGGAATTCAAGAAAGCCAGGATTTCAACT  272

seq1  CCCTCCCACCCCCTGTCCTTGCAGCTATGGCCATTGCTGTGAGGTCAGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCACCCCCTGTCCTTGCAGCTATGGCCATTGCTGTGAGGTCAGCT  322

seq1  GGGATGAAAAACTATCCTACATAGAAACATGGGAGGGGTATGGCCCCTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGAAAAACTATCCTACATAGAAACATGGGAGGGGTATGGCCCCTAA  372

seq1  AACAAGCACAGATGGGCAGCCCAGCAGAGCTATGGGCTGTGTTGGACCCG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCACAGATGGGCAGCCCAGCAGAGCTATGGGCTGTGTTGGACCCG  422

seq1  GCAACTAGTTCTGTTAATATTATCATTTAAGTATCTTTTTTTAAAAAATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTAGTTCTGTTAATATTATCATTTAAGTATCTTTTTTTAAAAAATT  472

seq1  GAATCCTTCATTCTTTCTTTTACTGTGATGTCTACCATTATTTGAAAGGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTTCATTCTTTCTTTTACTGTGATGTCTACCATTATTTGAAAGGT  522

seq1  TCCATGTGGACTTACTTAAGAATGAAGTTTAGAACATAAAAGTACTTATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGTGGACTTACTTAAGAATGAAGTTTAGAACATAAAAGTACTTATT  572

seq1  ACTTTTATTTAATGAATACTTAGGATCCAAATACTAACCTCTAGAATAGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTATTTAATGAATACTTAGGATCCAAATACTAACCTCTAGAATAGC  622

seq1  AATAGGAAGTGAGAGATGTGTTAGCCCTCTGACCCATTAGCTTAGTCCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAAGTGAGAGATGTGTTAGCCCTCTGACCCATTAGCTTAGTCCAG  672

seq1  AAAAGTGAAGATTCAGTGATGTAATAGGAAAGGCCTGGGAATGCTTTCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGAAGATTCAGTGATGTAATAGGAAAGGCCTGGGAATGCTTTCAA  722

seq1  AATATAAGTGACTAAGAGCTTGACTTTTTGAAGTGAAGTGAAGAGGGCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAGTGACTAAGAGCTTGACTTTTTGAAGTGAAGTGAAGAGGGCAA  772

seq1  TCCTCTGTCATGACTTAAGCATGGAGAAGGTGCTCTGGGTGATTTTCATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGTCATGACTTAAGCATGGAGAAGGTGCTCTGGGTGATTTTCATT  822

seq1  GGTGTGTGGGACTCAGTCCAACACTGGAAGGTAGTTTCAATTTTAGCATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTGGGACTCAGTCCAACACTGGAAGGTAGTTTCAATTTTAGCATT  872

seq1  GCCTTCAGCAATATTAAGAACCACAGCATCTTGTCACGGTTTCATTTGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCAGCAATATTAAGAACCACAGCATCTTGTCACGGTTTCATTTGAG  922

seq1  AAGTTTTTTTCCCTGAATAATTTACTACATTGATTTGGAGATTTAGAAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTTTTCCCTGAATAATTTACTACATTGATTTGGAGATTTAGAAAA  972

seq1  ATGTAAACAAGAGAATTC  1017
      ||||||||||||||||||
seq2  ATGTAAACAAGAGAATTC  990

seq1: chr18_21860683_21861596
seq2: B6Ng01-047D21.g_64_970

seq1  GAATTCATTTTCTTGAATAAGAAGGGGGATTCTTTAGATTTAGTAGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTCTTGAATAAGAAGGGGGATTCTTTAGATTTAGTAGTTTT  50

seq1  CGAAAAACAATCACCTTCCTCTTGTTTTTTAAAAAGGCGTTAGGGACTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAAAACAATCACCTTCCTCTTGTTTTTTAAAAAGGCGTTAGGGACTCT  100

seq1  CAGCACTTTTGATTCTTGCTGGTTCTTGACATGAGACAACCCTTCTACGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTTTTGATTCTTGCTGGTTCTTGACATGAGACAACCCTTCTACGG  150

seq1  TAGGGTTGTTTCTGCCTTGATTAGTTTTGAGTTGTTAAGTTGTGGAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTTGTTTCTGCCTTGATTAGTTTTGAGTTGTTAAGTTGTGGAAATG  200

seq1  TGCCACAGAGGAATGCCTTTATGAAAACAATTGAGTAAGTCATTTAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAGAGGAATGCCTTTATGAAAACAATTGAGTAAGTCATTTAGAAA  250

seq1  GACCTTTATCCTAGTCTATAGCCATACCTGTATGCACCCATCTTATGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTTATCCTAGTCTATAGCCATACCTGTATGCACCCATCTTATGTTA  300

seq1  GAAGCTAAGAAGGGTCAGGCCTGGTTAATACTTGGATGGGAGACAGGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTAAGAAGGGTCAGGCCTGGTTAATACTTGGATGGGAGACAGGACT  350

seq1  GACGCTAACTTGAGTTTTGCCATTGTGGATAAGAATAGCTGCCTGGCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGCTAACTTGAGTTTTGCCATTGTGGATAAGAATAGCTGCCTGGCCAC  400

seq1  ATTGGAAGGGGGTTGGTTGTTCTGATTAGTTTTTGTTAACTAGACACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAAGGGGGTTGGTTGTTCTGATTAGTTTTTGTTAACTAGACACAAT  450

seq1  CGTAGACATCCCTGGAAAGAAGAATCTCAATGGATAAATTGCCTCCATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGACATCCCTGGAAAGAAGAATCTCAATGGATAAATTGCCTCCATCA  500

seq1  GGTTGGCCTATAGTCAAGTCTATGGAGGTGATTTCTGCCTTTCTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGCCTATAGTCAAGTCTATGGAGGTGATTTCTGCCTTTCTTTTTTT  550

seq1  TTTTTATTAGATATATTTTATTTACATTTCAAATGTTATCTCCTTTCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATTAGATATATTTTATTTACATTTCAAATGTTATCTCCTTTCCTA  600

seq1  GTTTCCCCTCTGATAATCCTCTATCCCCTCCCCATTCCCCTGGTCCCCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCCTCTGATAATCCTCTATCCCCTCCCCATTCCCCTGGTCCCCAA  650

seq1  CCCACCCACTCCCACTTCCTGGCCCTGGCATTCCCCCTATACTGAGGCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCCACTCCCACTTCCTGGCCCTGGCATTCCCCCTATACTGAGGCAT  700

seq1  AGAAGAACCTTCACAGGACCAAGGACCTCTCCTCCCACTGATGGCTGACA  750
      |||||| ||||||||||||| |||||||||||||||||||||||||||||
seq2  AGAAGACCCTTCACAGGACCCAGGACCTCTCCTCCCACTGATGGCTGACA  750

seq1  AGGCCATCCTCTGCTAGATCCGTGAGTCCCTCCATGTGTTTTCTTTGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCATCCTCTGCTAGATCCGTGAGTCCCTCCATGTGTTTTCTTTGATT  800

seq1  GGTGGTTTAGTCTCA-GTGAGATCTGGGGGTTCTGGATAGTTCATACTGT  849
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGTGGTTTAGTCTCAGGTGAGATCTGGGGGTTCTGGATAGTTCATACTGT  850

seq1  TGTTCCTCCTATGGGGCTGCAAACCCCTTCAACTCCTTGGGTACTTTAAC  899
      ||||||| |||  |||||||||| |||||| ||||  ||||||| |||||
seq2  TGTTCCT-CTAATGGGCTGCAAA-CCCTTC-ACTC--TGGGTAC-TTAAC  894

seq1  TCCTTCCTTGGGGAC  914
      ||  | |||||||||
seq2  TC--TTCTTGGGGAC  907