BAC Information

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BAC

Clone NameB6Ng01-047F12
Chromosome18 (Build37)
Map Location 54,730,379 - 54,731,533
singlet/doubletsinglet
Overlap genenone
Upstream genePrdm6, Ccdc100, Csnk1g3, EG433184, LOC667360
Downstream geneEG545257, LOC100042489, Zfp608, LOC100043089
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047F12.bB6Ng01-047F12.g
ACCDH872233DH872234
length1,1171,146
definitionDH872233|Mus musculus domesticus DNA, BAC clone: B6Ng01-047F12, 5' end.DH872234|Mus musculus domesticus DNA, BAC clone: B6Ng01-047F12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgattcttttattgttggaatctgattgaaatttcaggaaaa
tcactatagtggcaagacatagaccttggatagtggttagtcttattgtc
aactagacacaaagttgagtcatcttggaaaaggaagcttaattgaagag
ttatcaccatcaagttggtctgtgcccttgtatatgggggatgattctct
tgactgaggatcgatgaaggtccagtcttgtgtgaataatttcaattcta
agcaggtgggcatgggctgaataagaaagcaagcatagctatacagtaag
aacaattcttccctccatggccaatatttgaagttcctacagtcttgagt
ccctgccctgaagtcccacaaaatgatggattatgacctagaagttgtaa
actgaaataaatgctttctccctcaagttgttttagtcagtgtatcacag
cacgggagaaataatagttactcttcccaaaccgtgactttccatttcag
tgccttgagcttcacctgcatggtttccatttttgtggcacacagtaacc
attcaagtgagtcactgagtcagttcgctttgaggagctcccctctgtct
atttgcctacatgacatgtgtcgtgagctccaaggaagcacagagagtac
aaggtctctgatgctgtcaaaactcaagtcaaagaatccaaactaaatag
agacctacacctccctcctgtgacagaggcccaactattagtaacagcag
cacacgatgtttaggtttcactatctgctccctcagagctcacaggcctt
tctcacgcgcacgtgttaccagggattttgagttagaatagaaatataca
acctgggaggttgctgtttaggacagtgtagacctgattttcaggtctgg
aaatggatatctgctttctgctttcatcagcacaatagaaacccagacct
atcttatctatacagatttcacacgtgtggtgaaatggagaagtatgctg
ctagactctgtcatggacgactacagtatctcacttattaaagacgtttg
catgacctctaaatagcagctaagtttaagatctggagtgattcagtacc
tttcacccttggctaat
gaattctcacctgaagaataccgaatggccgagaagctcctgaaaaaatg
ttcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagtttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatggtactacccgaggatcctgcaatacctctcctgggc
atatatccagaagatgtcccaacaggtaataaggccacatgctccactat
gttcatagcagccttatttataatagccagaagccggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggttggacctggagggcatcgtcctgagtgaggtaacacaatcacaaa
agaactcaaatgatatgtactcactgataagtggatattagcccagaaac
ttagtatagcgagatataaggtacaatttgtaaaacacatgaaactgaag
aagaacgaagaccaaagtgtggatactttgccccttcttagaattgtaaa
caatcaccaatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggactatctggagactgccatatccagggatccatcccataatta
gcctccaaacgatgacaccattgcatacactagcatgcatttgttgcaag
gactgtgatatagctgtctcttgtgagactaggccagggcctagcaaaca
acagagtgatgctcacagtcaactattggatggatcacaaggcccccaat
ggaggagctagagaagtattccagagctaaagagatctgcaaccctgtag
tgcacattataactacagtacccgagctctgactctagctgcaatttttt
caaatactagtgcatcactgagagagtccatagaatgcaccttattgcct
agtacaggatgcagaacaaaaaatggaatgcgtggtgtagggatgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_54730379_54731533
seq2: B6Ng01-047F12.b_46_1162

seq1  GAATTCCATGATTCTTTTATTGTTGGAATCTGATTGAAATTTCAGGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGATTCTTTTATTGTTGGAATCTGATTGAAATTTCAGGAAAA  50

seq1  TCACTATAGTGGCAAGACATAGACCTTGGATAGTGGTTAGTCTTATTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATAGTGGCAAGACATAGACCTTGGATAGTGGTTAGTCTTATTGTC  100

seq1  AACTAGACACAAAGTTGAGTCATCTTGGAAAAGGAAGCTTAATTGAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGACACAAAGTTGAGTCATCTTGGAAAAGGAAGCTTAATTGAAGAG  150

seq1  TTATCACCATCAAGTTGGTCTGTGCCCTTGTATATGGGGGATGATTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCACCATCAAGTTGGTCTGTGCCCTTGTATATGGGGGATGATTCTCT  200

seq1  TGACTGAGGATCGATGAAGGTCCAGTCTTGTGTGAATAATTTCAATTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAGGATCGATGAAGGTCCAGTCTTGTGTGAATAATTTCAATTCTA  250

seq1  AGCAGGTGGGCATGGGCTGAATAAGAAAGCAAGCATAGCTATACAGTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTGGGCATGGGCTGAATAAGAAAGCAAGCATAGCTATACAGTAAG  300

seq1  AACAATTCTTCCCTCCATGGCCAATATTTGAAGTTCCTACAGTCTTGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTCTTCCCTCCATGGCCAATATTTGAAGTTCCTACAGTCTTGAGT  350

seq1  CCCTGCCCTGAAGTCCCACAAAATGATGGATTATGACCTAGAAGTTGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCCCTGAAGTCCCACAAAATGATGGATTATGACCTAGAAGTTGTAA  400

seq1  ACTGAAATAAATGCTTTCTCCCTCAAGTTGTTTTAGTCAGTGTATCACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAATAAATGCTTTCTCCCTCAAGTTGTTTTAGTCAGTGTATCACAG  450

seq1  CACGGGAGAAATAATAGTTACTCTTCCCAAACCGTGACTTTCCATTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGGAGAAATAATAGTTACTCTTCCCAAACCGTGACTTTCCATTTCAG  500

seq1  TGCCTTGAGCTTCACCTGCATGGTTTCCATTTTTGTGGCACACAGTAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGAGCTTCACCTGCATGGTTTCCATTTTTGTGGCACACAGTAACC  550

seq1  ATTCAAGTGAGTCACTGAGTCAGTTCGCTTTGAGGAGCTCCCCTCTGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGTGAGTCACTGAGTCAGTTCGCTTTGAGGAGCTCCCCTCTGTCT  600

seq1  ATTTGCCTACATGACATGTGTCGTGAGCTCCAAGGAAGCACAGAGAGTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCCTACATGACATGTGTCGTGAGCTCCAAGGAAGCACAGAGAGTAC  650

seq1  AAGGTCTCTGATGCTGTCAAAACTCAAGTCAAAGAATCCAAACTAAATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTCTGATGCTGTCAAAACTCAAGTCAAAGAATCCAAACTAAATAG  700

seq1  AGACCTACACCTCCCTCCTGTGACAGAGGCCCAACTATTAGGTAACAGCA  750
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGACCTACACCTCCCTCCTGTGACAGAGGCCCAACTATTA-GTAACAGCA  749

seq1  GCACACGATGTTTAGGTTTCACTATCTGCTCCCTCAGGAGCTCACAGGCC  800
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GCACACGATGTTTAGGTTTCACTATCTGCTCCCTCA-GAGCTCACAGGCC  798

seq1  TTTCTCACGCGCACGTGTTACCAGGGATTTTGAGTTAGAATAGAAATATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCACGCGCACGTGTTACCAGGGATTTTGAGTTAGAATAGAAATATA  848

seq1  CAACCTGGGAGGTTGCTGTTTAGGGACAGGTGTAAGACCTGATTTTCAGG  900
      |||||||||||||||||||||| ||||| |||| |||||||||||||| |
seq2  CAACCTGGGAGGTTGCTGTTTA-GGACA-GTGT-AGACCTGATTTTCA-G  894

seq1  GTCTTGGAAATGGATATCTGCTTTCCTGCTTTCATCAGCACACATAGAAA  950
      ||| |||||||||||||||||||| ||||||||||||||||| |||||||
seq2  GTC-TGGAAATGGATATCTGCTTT-CTGCTTTCATCAGCACA-ATAGAAA  941

seq1  CCCAGGACCTTATCTTATCTAATACAGAATTTCAACACGTGGTGGGTGGA  1000
      |||| |||| |||||||||| |||||| ||||| |||||||   ||||  
seq2  CCCA-GACC-TATCTTATCT-ATACAG-ATTTC-ACACGTG--TGGTG--  982

seq1  AAATGGAGAAGGTATGCTGGCTTAAGACTCTGTCATTGGACGACTACAGT  1050
      |||||||||| ||||||| |||  ||||||||||| ||||||||||||| 
seq2  AAATGGAGAA-GTATGCT-GCT--AGACTCTGTCA-TGGACGACTACAG-  1026

seq1  TATCTCACTTATAAAAGGAAGGTTTGCATTGACCTCTAAAATAAGCAGCT  1100
      |||||||||||| ||||  | ||||||| |||||||||||   |||||||
seq2  TATCTCACTTATTAAAG--ACGTTTGCA-TGACCTCTAAA--TAGCAGCT  1071

seq1  AAAAGTTTTAAGATACTGGAAGTAATTCAGTACTTTACAAAACCCTGTGG  1150
      ||    |||||||| |||| ||| ||||||||| || |   ||||| |||
seq2  AA---GTTTAAGAT-CTGG-AGTGATTCAGTACCTTTC---ACCCT-TGG  1112

seq1  CTAAT  1155
      |||||
seq2  CTAAT  1117