BAC Information

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BAC

Clone NameB6Ng01-051A07
Chromosome18 (Build37)
Map Location 87,352,701 - 87,353,822
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665402, Neto1, Cbln2, LOC100039872, LOC100039881, LOC665437, LOC435580, LOC546719
Downstream geneLOC383318, Ppia-ps18_1039.1, LOC329008, LOC100039961
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051A07.bB6Ng01-051A07.g
ACCDH874786DH874787
length1,2611,105
definitionDH874786|Mus musculus domesticus DNA, BAC clone: B6Ng01-051A07, 5' end.DH874787|Mus musculus domesticus DNA, BAC clone: B6Ng01-051A07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttttaatggggttatttgat
tttctgaagtccaccttcttcagttctttatatatgttggatattagtcc
cctatctgatttaggataggtaaagatcctttcccaatctgttggtggtc
tttttgtcttattgacagtgtcttttgtcttgcagaaactttggagtttc
attaggtcccatttgtcaattctcgatcttccagcacaagccattgctgt
tctgttcaggaatttttcccctgtgcccatatcttcaaggcttttcccca
agaagaaatgggagagagcacatactagcagcttgacaacacatctaaaa
gctctagaaaaaatggaagcaaattcacccaagaggagtagacggcagga
aattatcaaactcaggggtgaaatcaaccaagtggaaacaagaaaaacta
ttccaagaattaaccaaacgaggagttggttctttgagaaaatcaacaag
atagataaaccattagctagactcactagagggcacagggacaaaatcct
aattaacaaaatcagaactgaaaagggagacataacaacagatcctgaag
aaatccaaaacaccatcagatccttctacaaaaggctatactcaacaaaa
ctggaaaacctggacgaaatggacaaatttctggacagataccaggtacc
aaagttgaatcaggatcaagttgaccttctaaacagtcccatatccccta
aagaaatagaagcagttataaatagtctcccagccaaaaaaagcccagga
ccagacgggtttagtgcagagttctatcagaccttcaaagaagatctaat
tccagttctgcacaaactttttcacaagatagaagtagaaggtactctac
ccaactcattttatgaagccactattactctgatacctaaaccacagaaa
gatccaacaaagatagagaacttcagaccaatttctcttatgaatatcga
tgcaaaatcctcaataaaattcttgctaaccgaatccaagaacaaattaa
agcaatcatccatcctgaccaggtaggttttatccaggcatggcagggaa
ggtttatatacggaaatcctcatgtatccatttataacacttaaggacaa
aacccattgattcctctcgtgaagccgaaaagcattgtacaggattcacc
atcgtaaaggtcgggagatcggaatcaggcccgtacctaaacatgtaaaa
agagtctctac
gaattccatgagcctagtctagagttgagatgtgattgctgactataatt
tcactttgatatgcacagaataccctgggcaacaggagtataaaacaaac
aagagattagcttactggtgatttaatgtgcctaggatcacatattgaaa
gtaatgttttccttccaggtatttgtgattcctatcatcatcctcattga
tagtaggtgttgacaaagcctcttccgtgaatggcttctgagtgttatgc
agacgtctttccttacgagaccttaggatctgggtcccgacatggcaagg
accatgagaatgcttggttgacttttgccatgcatttgcatttttggttt
tgtatttgaaagactttaatttcactttgtgtgtaacagatgtttctcca
gaatcagaaaaagaaagctcagtctatgatacattcttcttttctctgag
gactgtgggagtagaatagaccactactcctctgttaatagtgatgatga
ggatgaatcaacacaagaccctggtctgggtacatcagcaaacatctgga
tgttctctttcattgggaactttgttctgacaaaaatttgcccaccaacc
tgtttcaaacaatagctagataatgttcaaaatgttagaatagttttgct
gaattgttggatccaagatataataggaacattcagaggtgaactaagca
aggttgaggaaataactcaggttactgatttgccagagccctgggaatta
gaagaattagatttccttattaggatggggcagagggagacactaggtgt
taataatttaattagaattcccttggtatgtagtatatcaactttctatt
ctggaagcacagtttctgccaactgtagtcacttggttttgtgccaatgt
gctcggttagatattagctgcattttgaaactatttactctttcttgacc
tagcaagaaccatggggattgaggatgagacgggaaagtacatgtgtact
attgtagtatctattatattaaaagaagtggtatgtgagaacatgagaaa
tgatttaaccttccaacttgtaagaaatagaatataataggtggcctgag
tgtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_87352701_87353822
seq2: B6Ng01-051A07.g_67_1171 (reverse)

seq1  GGACAACTCAGGCCACCCTTATTATATTTCTATTTTCTTAC-AGTTGGAA  49
      |||| ||||||||||||  ||||||| ||||| |||||||| |||||| |
seq2  GGAC-ACTCAGGCCACC--TATTATA-TTCTA-TTTCTTACAAGTTGG-A  44

seq1  AGGTTTTACATTCATTTTCTCATGTTCTCACATA-CACTATCTTTTAATA  98
      |||||    | ||| ||||||||||||||||||| |||| ||||||||||
seq2  AGGTT---AAATCA-TTTCTCATGTTCTCACATACCACT-TCTTTTAATA  89

seq1  TATATAGATACTTAACAATAGTACACATTGTACTTTTCCCCGTCCTCATC  148
      || |||||||||  ||||||||||||| ||||||||  ||||| ||||||
seq2  TA-ATAGATACT--ACAATAGTACACA-TGTACTTT--CCCGT-CTCATC  132

seq1  CTCAATCCCCATGGTTTCTTGCTAGGTCAAGAAAGAGTAAATAGTTTCAA  198
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTCAATCCCCATGG-TTCTTGCTAGGTCAAGAAAGAGTAAATAGTTTCAA  181

seq1  AATGCAGCTAATATCTAACCGAGCACATTGGCACAAAACCAAGTGACTAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGCTAATATCTAACCGAGCACATTGGCACAAAACCAAGTGACTAC  231

seq1  AGTTGGCAGAAACTGTGCTTCCAGAATAGAAAGTTGATATACTACATACC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCAGAAACTGTGCTTCCAGAATAGAAAGTTGATATACTACATACC  281

seq1  AAGGGAATTCTAATTAAATTATTAACACCTAGTGTCTCCCTCTGCCCCAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAATTCTAATTAAATTATTAACACCTAGTGTCTCCCTCTGCCCCAT  331

seq1  CCTAATAAGGAAATCTAATTCTTCTAATTCCCAGGGCTCTGGCAAATCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATAAGGAAATCTAATTCTTCTAATTCCCAGGGCTCTGGCAAATCAG  381

seq1  TAACCTGAGTTATTTCCTCAACCTTGCTTAGTTCACCTCTGAATGTTCCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGAGTTATTTCCTCAACCTTGCTTAGTTCACCTCTGAATGTTCCT  431

seq1  ATTATATCTTGGATCCAACAATTCAGCAAAACTATTCTAACATTTTGAAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATCTTGGATCCAACAATTCAGCAAAACTATTCTAACATTTTGAAC  481

seq1  ATTATCTAGCTATTGTTTGAAACAGGTTGGTGGGCAAATTTTTGTCAGAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTAGCTATTGTTTGAAACAGGTTGGTGGGCAAATTTTTGTCAGAA  531

seq1  CAAAGTTCCCAATGAAAGAGAACATCCAGATGTTTGCTGATGTACCCAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTCCCAATGAAAGAGAACATCCAGATGTTTGCTGATGTACCCAGA  581

seq1  CCAGGGTCTTGTGTTGATTCATCCTCATCATCACTATTAACAGAGGAGTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTCTTGTGTTGATTCATCCTCATCATCACTATTAACAGAGGAGTA  631

seq1  GTGGTCTATTCTACTCCCACAGTCCTCAGAGAAAAGAAGAATGTATCATA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTATTCTACTCCCACAGTCCTCAGAGAAAAGAAGAATGTATCATA  681

seq1  GACTGAGCTTTCTTTTTCTGATTCTGGAGAAACATCTGTTACACACAAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGCTTTCTTTTTCTGATTCTGGAGAAACATCTGTTACACACAAAG  731

seq1  TGAAATTAAAGTCTTTCAAATACAAAACCAAAAATGCAAATGCATGGCAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTAAAGTCTTTCAAATACAAAACCAAAAATGCAAATGCATGGCAA  781

seq1  AAGTCAACCAAGCATTCTCATGGTCCTTGCCATGTCGGGACCCAGATCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAACCAAGCATTCTCATGGTCCTTGCCATGTCGGGACCCAGATCCT  831

seq1  AAGGTCTCGTAAGGAAAGACGTCTGCATAACACTCAGAAGCCATTCACGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTCGTAAGGAAAGACGTCTGCATAACACTCAGAAGCCATTCACGG  881

seq1  AAGAGGCTTTGTCAACACCTACTATCAATGAGGATGATGATAGGAATCAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCTTTGTCAACACCTACTATCAATGAGGATGATGATAGGAATCAC  931

seq1  AAATACCTGGAAGGAAAACATTACTTTCAATATGTGATCCTAGGCACATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCTGGAAGGAAAACATTACTTTCAATATGTGATCCTAGGCACATT  981

seq1  AAATCACCAGTAAGCTAATCTCTTGTTTGTTTTATACTCCTGTTGCCCAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACCAGTAAGCTAATCTCTTGTTTGTTTTATACTCCTGTTGCCCAG  1031

seq1  GGTATTCTGTGCATATCAAAGTGAAATTATAGTCAGCAATCACATCTCAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTCTGTGCATATCAAAGTGAAATTATAGTCAGCAATCACATCTCAA  1081

seq1  CTCTAGACTAGGCTCATGGAATTC  1122
      ||||||||||||||||||||||||
seq2  CTCTAGACTAGGCTCATGGAATTC  1105