BAC Information

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BAC

Clone NameB6Ng01-051G20
Chromosome18 (Build37)
Map Location 79,077,511 - 79,078,547
singlet/doubletsinglet
Overlap geneSetbp1
Upstream genePstpip2, 5430411K18Rik, Cd33l3, Slc14a1, Slc14a2, EG620155
Downstream geneLOC100039242, LOC100039250, LOC383311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051G20.bB6Ng01-051G20.g
ACCDH875071DH875072
length7671,032
definitionDH875071|Mus musculus domesticus DNA, BAC clone: B6Ng01-051G20, 5' end.DH875072|Mus musculus domesticus DNA, BAC clone: B6Ng01-051G20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctttctcaggttaaggatggttccactccctcgtggtgggactc
aagttagtcatcctaagggctttagcctgggagagctggccccaccactt
atctgccatatgatggcatgggtgaggagagatgttgtcctcttgccctt
taccacctgtggcaggcaggtgagctgggcgcaaggtcataagagcagga
gagctgtccctgcccctcactagctgcagcactagagagagcttgccctg
ctggcatgggcacacgtgagcttgatttgacggcatgagagcaggagagt
tggctctgccccttgctagctgcagtagcggatgatctagacagggaagt
attggagacctcaccctggtggtgtggctgctggagacctgtcaggcggg
tggaccagctcagatatcacccgggccctgatccaggacaccgactctgt
ctattccaatatctatcatatctataaactgctagagcccctgaagctgc
agggtccaaagctgcaagatcttcatgacacaggacaacaaaaggattcc
aagaggagtcctggtgaggaaccagtatttatagtggagcagaagccaga
gtcctggaaccagaccaatgactcattgcaatgaacatttccaagatata
tgaacaaaacagtatgctgtgtgacacactgtgacacactacagctccca
agataagaattttcttttcttttggttaagaggttgaaagggtagagggt
ggatacaaggggatggg

gaattcttaccttaggatgaatgagaggggaggagcttccgaattaaaac
cccccaatacagagaaggttatttttctccataggcatttttattgggtt
tctgcaagccggtttttatataaaaagccctaggccatgagtgacatttg
attcaaggatcccacggcctgtttatcaatagaaaggacagagcaatagg
agcctggggaaccagatggacagaggtgcctagcccccttcctggtatca
tttatgaactagctgccagctgccctctagcacaacctgaaagaagtccc
aagagtctcacatatacaactggggcaatccagatgttttcctgttgtgt
ctggctgaaaccaaataaagaccaggcttcagggatttcctgaaaagcat
aaaacttggtgagagaagtaaaaaattagactgaagagtagatctctctg
gtagccatgaaacttctacagatataccccatttccttaaccctcaacaa
cccctctcctccatgctgccatcttttatttctttaaaagcatggatctc
cttgtatcttttaggttgcatggtgtcttccaggtagcgttagggtgcca
ggcagaacattctaatcactcactggatgttttgtctgtaagcataacaa
cgtttaaagttgtggctactcaaggtgaaaaactcaatcatgtccataga
ccaaaatgtatcaaggtagccatttagtgttgaatactggtcatgccaga
gtcaatgggatgtcacctggctgatgctactcagttctccccttgtatag
agtggccataacttcttgctgactcatagtctgggcattggagatagtta
tcttaaagaacaagacaagatcaggacatgcttagccaagtaaattgcca
caccaccagccctagcagcaccagcagcagcaccaacaatcaacagtatc
agagtgctgcctatggagcaggcacatacagtttggtggtggtggtgggg
gatatggaaccctaaacccttggaaatagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_79077511_79078547
seq2: B6Ng01-051G20.g_68_1099

seq1  GAATTCTTACCTTAGGATGAATGAGAGGGGAGGAGCTTCCGAATTAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACCTTAGGATGAATGAGAGGGGAGGAGCTTCCGAATTAAAAC  50

seq1  CCCCCAATACAGAGAAGGTTATTTTTCTCCATAGGCATTTTTATTGGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAATACAGAGAAGGTTATTTTTCTCCATAGGCATTTTTATTGGGTT  100

seq1  TCTGCAAGCCGGTTTTTATATAAAAAGCCCTAGGCCATGAGTGACATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAGCCGGTTTTTATATAAAAAGCCCTAGGCCATGAGTGACATTTG  150

seq1  ATTCAAGGATCCCACGGCCTGTTTATCAATAGAAAGGACAGAGCAATAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGGATCCCACGGCCTGTTTATCAATAGAAAGGACAGAGCAATAGG  200

seq1  AGCCTGGGGAACCAGATGGACAGAGGTGCCTAGCCCCCTTCCTGGTATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGGGAACCAGATGGACAGAGGTGCCTAGCCCCCTTCCTGGTATCA  250

seq1  TTTATGAACTAGCTGCCAGCTGCCCTCTAGCACAACCTGAAAGAAGTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAACTAGCTGCCAGCTGCCCTCTAGCACAACCTGAAAGAAGTCCC  300

seq1  AAGAGTCTCACATATACAACTGGGGCAATCCAGATGTTTTCCTGTTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTCTCACATATACAACTGGGGCAATCCAGATGTTTTCCTGTTGTGT  350

seq1  CTGGCTGAAACCAAATAAAGACCAGGCTTCAGGGATTTCCTGAAAAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGAAACCAAATAAAGACCAGGCTTCAGGGATTTCCTGAAAAGCAT  400

seq1  AAAACTTGGTGAGAGAAGTAAAAAATTAGACTGAAGAGTAGATCTCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTGGTGAGAGAAGTAAAAAATTAGACTGAAGAGTAGATCTCTCTG  450

seq1  GTAGCCATGAAACTTCTACAGATATACCCCATTTCCTTAACCCTCAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCATGAAACTTCTACAGATATACCCCATTTCCTTAACCCTCAACAA  500

seq1  CCCCTCTCCTCCATGCTGCCATCTTTTATTTCTTTAAAAGCATGGATCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTCCTCCATGCTGCCATCTTTTATTTCTTTAAAAGCATGGATCTC  550

seq1  CTTGTATCTTTTAGGTTGCATGGTGTCTTCCAGGTAGCGTTAGGGTGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATCTTTTAGGTTGCATGGTGTCTTCCAGGTAGCGTTAGGGTGCCA  600

seq1  GGCAGAACATTCTAATCACTCACTGGATGTTTTGTCTGTAAGCATAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAACATTCTAATCACTCACTGGATGTTTTGTCTGTAAGCATAACAA  650

seq1  CGTTTAAAGTTGTGGCTACTCAAGGTGAAAAACTCAATCATGTCCATAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTAAAGTTGTGGCTACTCAAGGTGAAAAACTCAATCATGTCCATAGA  700

seq1  CCAAAATGTATCAAGGTAGCCATTTAGTGTTGAATACTGGTCATGCCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATGTATCAAGGTAGCCATTTAGTGTTGAATACTGGTCATGCCAGA  750

seq1  GTCAATGGGATGTCACCTGGCTGATGCTACTCAGTTCTCCCCTTGTATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATGGGATGTCACCTGGCTGATGCTACTCAGTTCTCCCCTTGTATAG  800

seq1  AGTGGCCATAACTTCTTGCTGACTCATAGTCTGGGCATTGGAGATAGTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCCATAACTTCTTGCTGACTCATAGTCTGGGCATTGGAGATAGTTA  850

seq1  TCTTAAAGAACAAGACAAGATCAGGACATGCTTAGCCAAGTAAATTGCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAGAACAAGACAAGATCAGGACATGCTTAGCCAAGTAAATTGCCA  900

seq1  CACCACCAGCCCTAGCAGCACCAGCAGCAGCACCAACAATCAACAGTATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCAGCCCTAGCAGCACCAGCAGCAGCACCAACAATCAACAGTATC  950

seq1  AGGAGTGCTGCCTATGGAGCAGGGCACAATACAAGTTTGGTGGTGGTGGT  1000
      | ||||||||||||||||||| ||||| |||| |||||||||||||||||
seq2  A-GAGTGCTGCCTATGGAGCA-GGCAC-ATAC-AGTTTGGTGGTGGTGGT  996

seq1  -GGGGATATTGACACACTAAACCCTTGGACATTAGTTT  1037
       |||||||| || || ||||||||||||| | ||||||
seq2  GGGGGATATGGA-ACCCTAAACCCTTGGA-AATAGTTT  1032


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