BAC Information

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BAC

Clone NameB6Ng01-051I05
Chromosome18 (Build37)
Map Location 76,056,703 - 76,178,283
singlet/doubletdoublet
Overlap geneZbtb7c
Upstream geneLOC672799, Lipg, Rpl17, BC031181, Dym, LOC628356, EG667777, Smad7, Gm672
Downstream gene4833419G08Rik, LOC668184, Smad2, LOC668188, EG639576, EG664805, LOC620139, Ier3ip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051I05.bB6Ng01-051I05.g
ACCDH875129DH875130
length1,0241,132
definitionDH875129|Mus musculus domesticus DNA, BAC clone: B6Ng01-051I05, 5' end.DH875130|Mus musculus domesticus DNA, BAC clone: B6Ng01-051I05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,177,255 - 76,178,283)(76,056,703 - 76,057,867)
sequence
gaattctcttggaggcctttagattggtccttgggtcaggcacatcctga
taaggcctctgggtatagtgtcttccttggcctgtcattttggggcaggt
gtgctgggctattttccttttttcctccgatcttacttgtcacctccctc
tagtagacactttgcccccaaagctataacagccatgggcttcctgtttg
gcaatgaggaagaaaagagtggggaccagagggatgatgggtagaggtca
ggatgtttaagtcttgtctccctttcctcagactggctgtgcccttagat
cagacaccacagcccaggaaaggaggcccctcctcataccctccctgact
ctcatggcagtagccctctccctgctcacctcttctgtcccaggagagac
agcatcccatgttaacagtcttggtgtctacagtgggtctcccacacctt
gccctggcctctgacctcacctcctgtcacagggctgacgctaagcatgc
cactggcttcctgatgccccaacataggcagataccagtggatgtgcggc
ccttcctcaggagtgtgtgggtatctgtgcagcagcctaggggaggggat
ccacctggaaagcaggtgtgtgctacccaacagttgccaggactgccacc
ccaggcctccctcggaggagtgttgcctttcaacttcatctttttgtgac
ttgcatgttcactgagaagcaatacaaggaaggaattaaagagggcgaag
ttggtagagggatacctttcttctgggctaaaccctttgctgggaatgct
tttggagcctgagtcaaaggggggggggcaggtggctgagcatgttcttc
aaattgttctgagagatactttgggcttcttttattcattccattaaatc
agatattagctaatgcctgtcgtgtccttagaacggacctggcaactctc
tgatgcattgtctgcttgaaagtgaaggagaatggctttgatgtgaatcc
ccctgtcaggtcccttctgctctc
gaattctaactcttggtccaccctctgcccactttctgcatcccttcccc
aggtacccagggcatgcccttgtctcagagggactttctgactctcagtg
ggaaagagcatgtcctgtctttccatcccctttctgtttcgacctcccta
atctgtggaataagaccgaggttgcctacaccaagcctgtcccttctcct
ttctgtgcagggccgggtccacagtgtctctgattacattggtgcaatgt
ggccaggggagcagtcaccctcccccccccacccccgttccaactcttcc
taggcttcctgcacagtcgtcccgcagagccttctgcttttgatgtcagc
acatggtgctggctgactttgttgcacccagcatactttacccagtagca
ctcttaggtgatggacaccatgcctcagccccatgaaagctctctctctt
ttcagctcgttcctttgggggaggcatgctggttccctgcctctgctgtt
taatgagcaccagcagggcaggccctgcatctgctcggtcgtggccttga
gacctgagaggtgcaactatgggagatgggacaggaggctttctgctctg
gagatacagcacagcaccctgcccctctgcagctctgccctaggactaca
gggacgcgttctccaaatgcttgttggagaagaggttgtatttccatagt
cctatatcctgaaggctcaaggagttgactgccctctcctctcatcgtag
gcaagacctctgagaatgatcagggaaactggggagacatttttctatgt
atctcctccagccagccacatggtaaatgtgccccgggctgaataagtga
ggagggaacaaaggggagcttagctttgtcaaacgaatcccaaactgaga
cgaggcaatgttagaaggcactctgtggggtcaggcgtccttggggacca
gccccagctctccatttatagaagtttgaggtcagagagtgggggaggtg
ctcaatcatcacagacctcaagcagagatggtgagatctgagcccagcac
aggctgccctagtctctcgtctgaaaatgcctttcattggttgggggtga
acattgccaatttcttgaggttaatgtttggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_76177255_76178283
seq2: B6Ng01-051I05.b_45_1068 (reverse)

seq1  GAGA-CAGAAGGGACTTGACAGAGGGA-TCACATCAAAGGCCTTCTCCTT  48
      |||| |||||||||| |||||| |||| ||||||||||| | ||||||||
seq2  GAGAGCAGAAGGGACCTGACAGGGGGATTCACATCAAAGCCATTCTCCTT  50

seq1  CACTTTCAAGCAGACAAATGCATCAGAGGAGTTGCCAGGTCCGCTCTAAG  98
      ||||||||||||||| ||||||||||| ||||||||||||||| ||||||
seq2  CACTTTCAAGCAGAC-AATGCATCAGA-GAGTTGCCAGGTCCGTTCTAAG  98

seq1  GACACGACAGGCATTAGCTAATATCCTGATTTTAATGGAATGAATAATAA  148
      |||||||||||||||||||||||| |||| ||||||||||||||||| ||
seq2  GACACGACAGGCATTAGCTAATAT-CTGA-TTTAATGGAATGAATAA-AA  145

seq1  GAAGCCCAAAGTATCTCTCAGAACCAATTTTGAAGAACATGCTCAGCCAC  198
      ||||||||||||||||||||||||  | ||||||||||||||||||||||
seq2  GAAGCCCAAAGTATCTCTCAGAAC--AATTTGAAGAACATGCTCAGCCAC  193

seq1  CTGCCCCCCCCCCTTTGACTCAGGCTCCAAAAGCATTCCCAGCAAAGGGT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCCCCCCCCTTTGACTCAGGCTCCAAAAGCATTCCCAGCAAAGGGT  243

seq1  TTAGCCCAGAAGAAAGGTATCCCTCTACCAACTTCGCCCTCTTTAATTCC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCCAGAAGAAAGGTATCCCTCTACCAACTTCGCCCTCTTTAATTCC  293

seq1  TTCCTTGTATTGCTTCTCAGTGAACATGCAAGTCACAAAAAGATGAAGTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGTATTGCTTCTCAGTGAACATGCAAGTCACAAAAAGATGAAGTT  343

seq1  GAAAGGCAACACTCCTCCGAGGGAGGCCTGGGGTGGCAGTCCTGGCAACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCAACACTCCTCCGAGGGAGGCCTGGGGTGGCAGTCCTGGCAACT  393

seq1  GTTGGGTAGCACACACCTGCTTTCCAGGTGGATCCCCTCCCCTAGGCTGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGTAGCACACACCTGCTTTCCAGGTGGATCCCCTCCCCTAGGCTGC  443

seq1  TGCACAGATACCCACACACTCCTGAGGAAGGGCCGCACATCCACTGGTAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGATACCCACACACTCCTGAGGAAGGGCCGCACATCCACTGGTAT  493

seq1  CTGCCTATGTTGGGGCATCAGGAAGCCAGTGGCATGCTTAGCGTCAGCCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTATGTTGGGGCATCAGGAAGCCAGTGGCATGCTTAGCGTCAGCCC  543

seq1  TGTGACAGGAGGTGAGGTCAGAGGCCAGGGCAAGGTGTGGGAGACCCACT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACAGGAGGTGAGGTCAGAGGCCAGGGCAAGGTGTGGGAGACCCACT  593

seq1  GTAGACACCAAGACTGTTAACATGGGATGCTGTCTCTCCTGGGACAGAAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACACCAAGACTGTTAACATGGGATGCTGTCTCTCCTGGGACAGAAG  643

seq1  AGGTGAGCAGGGAGAGGGCTACTGCCATGAGAGTCAGGGAGGGTATGAGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGCAGGGAGAGGGCTACTGCCATGAGAGTCAGGGAGGGTATGAGG  693

seq1  AGGGGCCTCCTTTCCTGGGCTGTGGTGTCTGATCTAAGGGCACAGCCAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCCTCCTTTCCTGGGCTGTGGTGTCTGATCTAAGGGCACAGCCAGT  743

seq1  CTGAGGAAAGGGAGACAAGACTTAAACATCCTGACCTCTACCCATCATCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAAAGGGAGACAAGACTTAAACATCCTGACCTCTACCCATCATCC  793

seq1  CTCTGGTCCCCACTCTTTTCTTCCTCATTGCCAAACAGGAAGCCCATGGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTCCCCACTCTTTTCTTCCTCATTGCCAAACAGGAAGCCCATGGC  843

seq1  TGTTATAGCTTTGGGGGCAAAGTGTCTACTAGAGGGAGGTGACAAGTAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAGCTTTGGGGGCAAAGTGTCTACTAGAGGGAGGTGACAAGTAAG  893

seq1  ATCGGAGGAAAAAAGGAAAATAGCCCAGCACACCTGCCCCAAAATGACAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGAGGAAAAAAGGAAAATAGCCCAGCACACCTGCCCCAAAATGACAG  943

seq1  GCCAAGGAAGACACTATACCCAGAGGCCTTATCAGGATGTGCCTGACCCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAGGAAGACACTATACCCAGAGGCCTTATCAGGATGTGCCTGACCCA  993

seq1  AGGACCAATCTAAAGGCCTCCAAGAGAATTC  1029
      |||||||||||||||||||||||||||||||
seq2  AGGACCAATCTAAAGGCCTCCAAGAGAATTC  1024

seq1: chr18_76056703_76057867
seq2: B6Ng01-051I05.g_69_1200

seq1  GAATTCTAACTCTTGGTCCACCCTCTGCCCACTTTCTGCATCCCTTCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAACTCTTGGTCCACCCTCTGCCCACTTTCTGCATCCCTTCCCC  50

seq1  AGGTACCCAGGGCATGCCCTTGTCTCAGAGGGACTTTCTGACTCTCAGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACCCAGGGCATGCCCTTGTCTCAGAGGGACTTTCTGACTCTCAGTG  100

seq1  GGAAAGAGCATGTCCTGTCTTTCCATCCCCTTTCTGTTTCGACCTCCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAGCATGTCCTGTCTTTCCATCCCCTTTCTGTTTCGACCTCCCTA  150

seq1  ATCTGTGGAATAAGACCGAGGTTGCCTACACCAAGCCTGTCCCTTCTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGGAATAAGACCGAGGTTGCCTACACCAAGCCTGTCCCTTCTCCT  200

seq1  TTCTGTGCAGGGCCGGGTCCACAGTGTCTCTGATTACATTGGTGCAATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGCAGGGCCGGGTCCACAGTGTCTCTGATTACATTGGTGCAATGT  250

seq1  GGCCAGGGGAGCAGTCACCCTCCCCCCCCCACCCCCGTTCCAACTCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGGGAGCAGTCACCCTCCCCCCCCCACCCCCGTTCCAACTCTTCC  300

seq1  TAGGCTTCCTGCACAGTCGTCCCGCAGAGCCTTCTGCTTTTGATGTCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTCCTGCACAGTCGTCCCGCAGAGCCTTCTGCTTTTGATGTCAGC  350

seq1  ACATGGTGCTGGCTGACTTTGTTGCACCCAGCATACTTTACCCAGTAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTGCTGGCTGACTTTGTTGCACCCAGCATACTTTACCCAGTAGCA  400

seq1  CTCTTAGGTGATGGACACCATGCCTCAGCCCCATGAAAGCTCTCTCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGGTGATGGACACCATGCCTCAGCCCCATGAAAGCTCTCTCTCTT  450

seq1  TTCAGCTCGTTCCTTTGGGGGAGGCATGCTGGTTCCCTGCCTCTGCTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTCGTTCCTTTGGGGGAGGCATGCTGGTTCCCTGCCTCTGCTGTT  500

seq1  TAATGAGCACCAGCAGGGCAGGCCCTGCATCTGCTCGGTCGTGGCCTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGCACCAGCAGGGCAGGCCCTGCATCTGCTCGGTCGTGGCCTTGA  550

seq1  GACCTGAGAGGTGCAACTATGGGAGATGGGACAGGAGGCTTTCTGCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGAGAGGTGCAACTATGGGAGATGGGACAGGAGGCTTTCTGCTCTG  600

seq1  GAGATACAGCACAGCACCCTGCCCCTCTGCAGCTCTGCCCTAGGACTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATACAGCACAGCACCCTGCCCCTCTGCAGCTCTGCCCTAGGACTACA  650

seq1  GGGACGCGTTCTCCAAATGCTTGTTGGAGAAGAGGTTGTATTTCCATAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACGCGTTCTCCAAATGCTTGTTGGAGAAGAGGTTGTATTTCCATAGT  700

seq1  CCTATATCCTGAAGGCTCAAGGAGTTGACTGCCCTCTCCTCTCATCGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATATCCTGAAGGCTCAAGGAGTTGACTGCCCTCTCCTCTCATCGTAG  750

seq1  GCAAGACCTCTGAGAATGATCAGGGAAACTGGGGAGACA-TTTTCTATGT  799
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCAAGACCTCTGAGAATGATCAGGGAAACTGGGGAGACATTTTTCTATGT  800

seq1  ATCTCCTCCAGCCAGCCACATGGTAAATGTGCCCCGGGCTGAATAAGTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTCCAGCCAGCCACATGGTAAATGTGCCCCGGGCTGAATAAGTGA  850

seq1  GGAGGGAACAAAGGGGAGCTTAGCTTTGTCAAACGAATCCCAAACTGAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAACAAAGGGGAGCTTAGCTTTGTCAAACGAATCCCAAACTGAGA  900

seq1  CGAGGCAATGTAAGAAGGCAACTCTGTGGGGTTCAGGGCGTCCTTGGGGA  949
      ||||||||||| ||||||| ||||||||||| ||| ||||||||||||||
seq2  CGAGGCAATGTTAGAAGGC-ACTCTGTGGGG-TCA-GGCGTCCTTGGGGA  947

seq1  CCAGCCCCAGCTCCTCCATTTATAAGAAAGTTTTGAGGGTCAGAGGAAGT  999
      |||||||||||| |||||||||| ||||   ||||| ||||||||  |||
seq2  CCAGCCCCAGCT-CTCCATTTAT-AGAA--GTTTGA-GGTCAGAG--AGT  990

seq1  GGGGAGGGTGCCTCAAATCCATCAACAGACCTCCAAGGCCAGAGGATGGT  1049
      ||||  |||| |||||   |||| |||||||| ||||  |||| ||||||
seq2  GGGGGAGGTG-CTCAA--TCATC-ACAGACCT-CAAG--CAGA-GATGGT  1032

seq1  GAGATCTGGAGCCGAGCACAAGGCTGCCCTAGGTATCTCTCGCCCTTGGG  1099
      ||||||| ||||| ||||| ||||||||||||   ||||||| |      
seq2  GAGATCT-GAGCCCAGCAC-AGGCTGCCCTAG---TCTCTCGTC-----T  1072

seq1  GAAATTGCCTTTTCATATGGTTGGGGGTGGACATTGCAATTTTTCTTTGA  1149
      |||| |||| |||||| |||||||||||| ||||||| | |||   ||||
seq2  GAAAATGCC-TTTCAT-TGGTTGGGGGTGAACATTGCCAATTT--CTTGA  1118

seq1  GGGTTAATTGTTTGGC  1165
       |||||| ||||||||
seq2  -GGTTAA-TGTTTGGC  1132