BAC Information

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BAC

Clone NameB6Ng01-051M02
Chromosome18 (Build37)
Map Location 74,939,163 - 75,103,563
singlet/doubletdoublet
Overlap geneAcaa2, LOC672799, Lipg
Upstream geneMe2, Mro, Mapk4, 2810433K01Rik, Cxxc1, EG435570, Mbd1, Ccdc11, LOC628298, LOC668124, LOC668126, Myo5b
Downstream geneRpl17, BC031181, Dym, LOC628356, EG667777, Smad7, Gm672, Zbtb7c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051M02.bB6Ng01-051M02.g
ACCDH875303DH875304
length1,133898
definitionDH875303|Mus musculus domesticus DNA, BAC clone: B6Ng01-051M02, 5' end.DH875304|Mus musculus domesticus DNA, BAC clone: B6Ng01-051M02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,939,163 - 74,940,321)(75,102,667 - 75,103,563)
sequence
gaattcttactcaactctgcaggaaaccaaggtcggtgccagaaacccga
agtggtctggagcagagctggtgtgcaccgaagccagaggcttggtctca
gccacacgcgagtgcggggaagaaaatattccccaagaggctctattgaa
tttccactagggtgccctggttcctccaaacaatcggtagtagtctgttt
gaaactgccttgcttccttttctcttccattcctttactttgagggactg
caggcaagtgcatgcaggctctcagtgcatcacaggaaatggaattttag
ctagaacacacgagtgtctgttgacatgaggaggaaagagcacaaaacaa
accccagagacaggaaatttccctaagaaccgttttggtgttgcagagac
caagtggacgctgtgcaggagttctcagaaactcgagggaagacggtctt
aagtatttcaaacgcacgcaccgtctgttctctactctgtcttgatttcc
tttcggccccgccgctgcctttaagataacggaacacaggcccaaacttt
gacagtaagatgtagacagactgaccgtggtgggtaaatgtaaaagaaat
gtcacatgacaagaagttcggtcttatgaaacttctttacgatgggtgat
accacttgggggccaaacgggaagaacaggtttggatggagcattaagga
gcattcgttttaggtaaggttttgatacctctatcacgtaaggggacgtg
ccagacaaggactggttaggaacgttcaggcccctgcagacaagccaccg
gggggcgctgaacttaatgtggaaacaaatggatgaattttccttgttgt
tggtaattgcttccaaaagcaggacttatgtagcaaagttctcatggaag
tcgatagtctccgtgttcacgttttctcccatggtggtgtttcctgtgtg
gtccggtccaaagtacacctgcaaaatctcagaaaacccgactccctgct
ctttggatcatgtcccttctgcataggattttgtttgttgcttgttttta
aaggagttttagcatctgatcgagaagaatagaatagtaaggtttttaga
ctttaaattatctgtaatactggcatgcttttg
gaattctctggggctggagttacaggtggttgtgagctcacctgagctgc
gtgctgaggacagaagtctgtcttctctaagcgcagcttgtgttcttaac
tgttgagtaatctctcgggtccagacctttggttttggtgtgtagttgtt
agtggatgtttcatagaactgtcctgtagggacctggagtctggtgggga
ggctgaccactcatttcaaaactgtagaacagtttcagtcctgcaggagt
gatgggtggtcctgcagcagagatgagcagttctgtgtaatggagaggca
gtgctgcacagtgataggcccacggcggtgactgatgatgggccgtcctg
aaagctctgtagtggatacaacgcccggaaagtctctttccctttctcat
atgtgaatctggaaagcactgtctaggatttttgtctaacaacagtgact
tctcttttctcttagagtgacattttgcactcaagacccaacgaagagta
gcatctcccctggccaggagctgtggtttcacaagtgtcaggatggctgg
aaaatgaaaaacaaaaccaggtgactcacactttctgtgtgctatttgcc
catggccaccaatagaaagggtctcatttataaaactcacacggtggagg
gtgagggacaaacaccaaagctaaaagccatgaggcctcagggagggcgg
ctgtccctctgcccctcgctctgtcttattctctatgtgcttactgtatg
tatacataagtccccagcactggcattcataccctttcatcgtaggtggt
actaggcttccattaggcagtagggtgagaaggtgaaatataagcccatt
taattagattttctgggacccagtttatttgatctgatgttggtgttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_74939163_74940321
seq2: B6Ng01-051M02.b_47_1179

seq1  GAATTCTTACTCAACTCTGCAGGAAACCAAGGTCGGTGCCAGAAACCCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTCAACTCTGCAGGAAACCAAGGTCGGTGCCAGAAACCCGA  50

seq1  AGTGGTCTGGAGCAGAGCTGGTGTGCACCGAAGCCAGAGGCTTGGTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCTGGAGCAGAGCTGGTGTGCACCGAAGCCAGAGGCTTGGTCTCA  100

seq1  GCCACACGCGAGTGCGGGGAAGAAAATATTCCCCAAGAGGCTCTATTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACGCGAGTGCGGGGAAGAAAATATTCCCCAAGAGGCTCTATTGAA  150

seq1  TTTCCACTAGGGTGCCCTGGTTCCTCCAAACAATCGGTAGTAGTCTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACTAGGGTGCCCTGGTTCCTCCAAACAATCGGTAGTAGTCTGTTT  200

seq1  GAAACTGCCTTGCTTCCTTTTCTCTTCCATTCCTTTACTTTGAGGGACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGCCTTGCTTCCTTTTCTCTTCCATTCCTTTACTTTGAGGGACTG  250

seq1  CAGGCAAGTGCATGCAGGCTCTCAGTGCATCACAGGAAATGGAATTTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAAGTGCATGCAGGCTCTCAGTGCATCACAGGAAATGGAATTTTAG  300

seq1  CTAGAACACACGAGTGTCTGTTGACATGAGGAGGAAAGAGCACAAAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAACACACGAGTGTCTGTTGACATGAGGAGGAAAGAGCACAAAACAA  350

seq1  ACCCCAGAGACAGGAAATTTCCCTAAGAACCGTTTTGGTGTTGCAGAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCAGAGACAGGAAATTTCCCTAAGAACCGTTTTGGTGTTGCAGAGAC  400

seq1  CAAGTGGACGCTGTGCAGGAGTTCTCAGAAACTCGAGGGAAGACGGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGACGCTGTGCAGGAGTTCTCAGAAACTCGAGGGAAGACGGTCTT  450

seq1  AAGTATTTCAAACGCACGCACCGTCTGTTCTCTACTCTGTCTTGATTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTCAAACGCACGCACCGTCTGTTCTCTACTCTGTCTTGATTTCC  500

seq1  TTTCGGCCCCGCCGCTGCCTTTAAGATAACGGAACACAGGCCCAAACTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGGCCCCGCCGCTGCCTTTAAGATAACGGAACACAGGCCCAAACTTT  550

seq1  GACAGTAAGATGTAGACAGACTGACCGTGGTGGGTAAATGTAAAAGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTAAGATGTAGACAGACTGACCGTGGTGGGTAAATGTAAAAGAAAT  600

seq1  GTCACATGACAAGAAGTTCGGTCTTATGAAACTTCTTTACGATGGGTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATGACAAGAAGTTCGGTCTTATGAAACTTCTTTACGATGGGTGAT  650

seq1  ACCACTTGGGGGCCAAACGGGAAGAACAGGTTTGGATGGAGCATTAAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTTGGGGGCCAAACGGGAAGAACAGGTTTGGATGGAGCATTAAGGA  700

seq1  GCATTCGTTTTAGGTAAGGTTTTGATACCTCTATCACGTAAGGGGACGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCGTTTTAGGTAAGGTTTTGATACCTCTATCACGTAAGGGGACGTG  750

seq1  CCAGACAAGGACTGGTTAGGAACGTTCAGGCCCCTGCAGACAAGCCACCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACAAGGACTGGTTAGGAACGTTCAGGCCCCTGCAGACAAGCCACCG  800

seq1  GGGGGCGCTGAACTTAATGTGGAAACAAATGGATGAATTTTCCTTGTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCGCTGAACTTAATGTGGAAACAAATGGATGAATTTTCCTTGTTGT  850

seq1  TGGTAATTGCTTCCAAAAAGCAGGACTTATGTAGCAAAGTTCTCATGGAA  900
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGGTAATTGCTTCC-AAAAGCAGGACTTATGTAGCAAAGTTCTCATGGAA  899

seq1  GTCGATAGTCTCCGTGTTCACGTTTTCCTCCCATGGTGGTGTTTCCTGTG  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTCGATAGTCTCCGTGTTCACGTTTT-CTCCCATGGTGGTGTTTCCTGTG  948

seq1  TGGTCCGGTCCAAAGTACAACCTGCCAAAATCTCAGAAAACCCGACTCCC  1000
      |||||||||||||||||| ||||| |||||||||||||||||||||||||
seq2  TGGTCCGGTCCAAAGTAC-ACCTG-CAAAATCTCAGAAAACCCGACTCCC  996

seq1  TGCTCTTTGGATCAATGTCCCTTTCCTGCCATAAGGGATTTTTTGTTTGT  1050
      ||||||||||||| |||||||||  ||| ||||  |||  ||||||||||
seq2  TGCTCTTTGGATC-ATGTCCCTT--CTG-CATA--GGA--TTTTGTTTGT  1038

seq1  TGCTTTTGGTTTTTTAAAAGGAGTTTTTAGCATCTGAATTCGAAGAAGAA  1100
      |||||   ||||||  ||||||| |||||||||||||  ||| |||||||
seq2  TGCTT---GTTTTT--AAAGGAG-TTTTAGCATCTGA--TCG-AGAAGAA  1079

seq1  TTTAGAATAGTAAAGGGTTTTTTTAGACCTTTAAATATCTGT-ATATCTG  1149
        ||||||||||| |    ||||||||| || || ||||||| |||   |
seq2  --TAGAATAGTAAGG----TTTTTAGACTTTAAATTATCTGTAATACTGG  1123

seq1  CATGCTGTTG  1159
      |||||| |||
seq2  CATGCTTTTG  1133

seq1: chr18_75102667_75103563
seq2: B6Ng01-051M02.g_66_963 (reverse)

seq1  GAACACCAACATCAGCTCATACTAACCTGGGTTCCAGAAAATCTAA-TAA  49
      ||||||||||||||| ||| | ||| |||||| ||||||||||||| |||
seq2  GAACACCAACATCAGATCA-AATAAACTGGGTCCCAGAAAATCTAATTAA  49

seq1  ATGGGCTTATATCTCACCTTCTCACCCTACTGCCTACT-GCAGCCTAGTA  98
      |||||||||||| ||||||||||||||||||||||| | | |||||||||
seq2  ATGGGCTTATATTTCACCTTCTCACCCTACTGCCTAATGGAAGCCTAGTA  99

seq1  CCACCCTACGATG-AAGGGTATGAATGCCAGTGCTGGGGACTTATGTATA  147
      ||| ||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCA-CCTACGATGAAAGGGTATGAATGCCAGTGCTGGGGACTTATGTATA  148

seq1  CATACAGTAAGCACATAGAGAATAAGACAGAGCGAGGGGCAGAGGGACAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAGTAAGCACATAGAGAATAAGACAGAGCGAGGGGCAGAGGGACAG  198

seq1  CCGCCCTCCCTGAGGCCTCATGGCTTTTAGCTTTGGTGTTTGTCCCTCAC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCCTCCCTGAGGCCTCATGGCTTTTAGCTTTGGTGTTTGTCCCTCAC  248

seq1  CCTCCACCGTGTGAGTTTTATAAATGAGACCCTTTCTATTGGTGGCCATG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACCGTGTGAGTTTTATAAATGAGACCCTTTCTATTGGTGGCCATG  298

seq1  GGCAAATAGCACACAGAAAGTGTGAGTCACCTGGTTTTGTTTTTCATTTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATAGCACACAGAAAGTGTGAGTCACCTGGTTTTGTTTTTCATTTT  348

seq1  CCAGCCATCCTGACACTTGTGAAACCACAGCTCCTGGCCAGGGGAGATGC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCATCCTGACACTTGTGAAACCACAGCTCCTGGCCAGGGGAGATGC  398

seq1  TACTCTTCGTTGGGTCTTGAGTGCAAAATGTCACTCTAAGAGAAAAGAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTCGTTGGGTCTTGAGTGCAAAATGTCACTCTAAGAGAAAAGAGA  448

seq1  AGTCACTGTTGTTAGACAAAAATCCTAGACAGTGCTTTCCAGATTCACAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTGTTGTTAGACAAAAATCCTAGACAGTGCTTTCCAGATTCACAT  498

seq1  ATGAGAAAGGGAAAGAGACTTTCCGGGCGTTGTATCCACTACAGAGCTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAAGGGAAAGAGACTTTCCGGGCGTTGTATCCACTACAGAGCTTT  548

seq1  CAGGACGGCCCATCATCAGTCACCGCCGTGGGCCTATCACTGTGCAGCAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACGGCCCATCATCAGTCACCGCCGTGGGCCTATCACTGTGCAGCAC  598

seq1  TGCCTCTCCATTACACAGAACTGCTCATCTCTGCTGCAGGACCACCCATC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTCCATTACACAGAACTGCTCATCTCTGCTGCAGGACCACCCATC  648

seq1  ACTCCTGCAGGACTGAAACTGTTCTACAGTTTTGAAATGAGTGGTCAGCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGCAGGACTGAAACTGTTCTACAGTTTTGAAATGAGTGGTCAGCC  698

seq1  TCCCCACCAGACTCCAGGTCCCTACAGGACAGTTCTATGAAACATCCACT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACCAGACTCCAGGTCCCTACAGGACAGTTCTATGAAACATCCACT  748

seq1  AACAACTACACACCAAAACCAAAGGTCTGGACCCGAGAGATTACTCAACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTACACACCAAAACCAAAGGTCTGGACCCGAGAGATTACTCAACA  798

seq1  GTTAAGAACACAAGCTGCGCTTAGAGAAGACAGACTTCTGTCCTCAGCAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGAACACAAGCTGCGCTTAGAGAAGACAGACTTCTGTCCTCAGCAC  848

seq1  GCAGCTCAGGTGAGCTCACAACCACCTGTAACTCCAGCCCCAGAGAATTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCAGGTGAGCTCACAACCACCTGTAACTCCAGCCCCAGAGAATTC  898