BAC Information

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BAC

Clone NameB6Ng01-052H05
Chromosome18 (Build37)
Map Location 26,255,658 - 26,256,647
singlet/doubletsinglet
Overlap genenone
Upstream geneFhod3, 5730494M16Rik, AW554918, Brunol4, LOC100041241, LOC665916, LOC100041263, LOC100041274
Downstream geneEG665977
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052H05.bB6Ng01-052H05.g
ACCDH875805DH875806
length1,233986
definitionDH875805|Mus musculus domesticus DNA, BAC clone: B6Ng01-052H05, 5' end.DH875806|Mus musculus domesticus DNA, BAC clone: B6Ng01-052H05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttcaacaagtgtctgaatacaagattaacaacagcaacaacaa
aaatcagtagccctcccatatacaaatgacaatgggctaaaaaaagaaat
tgggaaaacaactcctttcacactagcctctaacaatataaaatatcttg
gtgtaactctaaacaagcaaatcaagtgcctttatgacaagaacttcaga
tttttgaagaaagaaattgaagaagatatcagaagatggaaatatctttc
atgctcatggatctatagaattgacatagtaaaaatggccattctactaa
aagcaatccacagattcaatgcaatccacatcaaaatcccaacattctta
cagttcttgaaagaacaattctcaacttcatatggaaaaacaagcaaaca
aacaaacaaacaaacaaacaaacaaataggatagctaaaataatgcggaa
caatataagaacttctggaggtctcaccatcgctgactgtattacagaaa
catagtaatgaaaaaccacatgatattggcataaaaactgacatgttgtt
caatggaattgaatagaaaacccagatataaatccacacacctatagata
tctgatttttgataaagaatctagaaatacacaatggagaaagaaagcat
ggtcaatgtattgtctgatcaaactggatggctgtatgtagaacctatgg
agatccatgtctattagacttcacaaaacttaagtccaagcagatcaaat
gcctcaaccagataccctgaactcagtcaaaaagaaaccggagaatagct
ttcagtgcattatctctggggatgactttctaagcagagtacagagaaca
aaggcactgagagcaacaattaattggacctcatgaaaggtttctgtaag
caaaggatactatcaataggacaaaacagcagcctatagaatgggaaaac
ttttaccaaccccacatccatagaaactaatatccaaagtatattaagaa
ctcagaactagatattaaataataaaaatttaaatggggtaagatctaac
agagaactcaagagaagaatctcaaaaggctgaatcactaaggaatatca
acatctagctacaagaaatgtaatcaactactttgaagatcgtctaccat
gaattctagataggtactcaagttcatcaagccgtggaattgaccaggta
cctcttcatgctgtggtaaagtcacctttataa
gaattcatgattagccctttaggattctgcaagacctacagttgttagag
gagaattttaataatatttaaaattaatttcaggacttgaattacatcgc
tgaatttcagatctgagattagaggaagaatgggaaatatgataaccaaa
taataatagtttgtgctctaggtgcaggatccagaatacagatgataact
gaagacagtctggtatagtatatgatcatttggaccatggttccagatgt
atgttgactgaaggcaattctatattcctgaggaaggaggcagatagagt
tcttgccttcatttgtgatttcctggaaatactaagcaaagctgagctag
cagtaagtaggataattgtgaggatgctgcagaatggctgacacagttcc
acctggagagaacccattatacattttaataacatgtttagtataataca
cctagaacagttgaaactgcctccgccagggtagccataatattgcttct
tcccccatctcctgtataatgaacagtaaattctcctaactcttgggtgc
cctgaaacaagccaattctatcttctcaccgctgcctttaatttttcaac
tttcctttcgcaagttcttttttctttcaaaaagcatcaatcctcatggt
gatgaatttggtaattcttgtacagttgtgagaaaataaatcactggata
caaactaaatgccaatactgagttgaggtgacatgaagagacacataagg
aaaagtctgcttttcagagggactacacacctgagaagctgagcacattc
ttaagtcagcctctttagtcagccgtagtaatcaagttttgaaaaaagta
gtaaaagcatgaataataatgagaagataatatcctaaagaatatttgta
atgtacctgggagagaccaaataggatccattgtttttgctgttttcttc
cttatatgtgaataaaacagcagtctctacttttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_26255658_26256647
seq2: B6Ng01-052H05.g_69_1054 (reverse)

seq1  AGAAAAGTAGAAGACTGCTGTTTTTTTATTTCACATATAAGGAAGAATAA  50
      |||||||||| |||||||||||||     |||||||||||||||||| ||
seq2  AGAAAAGTAG-AGACTGCTGTTTT----ATTCACATATAAGGAAGAA-AA  44

seq1  CAGGCAAAAAC-ATAGATCCTA-TTGGTCTCTCCCAAGTTACATTACAAA  98
      || |||||||| || ||||||| |||||||||||| || |||||||||||
seq2  CA-GCAAAAACAATGGATCCTATTTGGTCTCTCCC-AGGTACATTACAAA  92

seq1  TACTACTTTAGGATATTATCTTCTCATTATTATTCATGC-TTTACTACTT  147
      || | |||||||||||||||||||||||||||||||||| ||||||||||
seq2  TA-TTCTTTAGGATATTATCTTCTCATTATTATTCATGCTTTTACTACTT  141

seq1  TTTTC-AAACTTGATTACTACGGCTGACTTAAGAGGCTGACTTAAGAATG  196
      ||||| ||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTTCAAAACTTGATTACTACGGCTGACTAAAGAGGCTGACTTAAGAATG  191

seq1  TGCTCAGCTTCTCAGGTGTGTAGT-CCTCTGAAAAGCAGACTTTTCCTTA  245
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGCTCAGCTTCTCAGGTGTGTAGTCCCTCTGAAAAGCAGACTTTTCCTTA  241

seq1  TGTGTCTCTTCATGTCACCTCAACTCAGTATTGGCATTTAGTTTGTATCC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTCTTCATGTCACCTCAACTCAGTATTGGCATTTAGTTTGTATCC  291

seq1  AGTGATTTATTTTCTCACAACTGTACAAGAATTACCAAATTCATCACCAT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTTATTTTCTCACAACTGTACAAGAATTACCAAATTCATCACCAT  341

seq1  GAGGATTGATGCTTTTTGAAAGAAAAAAGAACTTGCGAAAGGAAAGTTGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATTGATGCTTTTTGAAAGAAAAAAGAACTTGCGAAAGGAAAGTTGA  391

seq1  AAAATTAAAGGCAGCGGTGAGAAGATAGAATTGGCTTGTTTCAGGGCACC  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAAGGCAGCGGTGAGAAGATAGAATTGGCTTGTTTCAGGGCACC  441

seq1  CAAGAGTTAGGAGAATTTACTGTTCATTATACAGGAGATGGGGGAAGAAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTTAGGAGAATTTACTGTTCATTATACAGGAGATGGGGGAAGAAG  491

seq1  CAATATTATGGCTACCCTGGCGGAGGCAGTTTCAACTGTTCTAGGTGTAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTATGGCTACCCTGGCGGAGGCAGTTTCAACTGTTCTAGGTGTAT  541

seq1  TATACTAAACATGTTATTAAAATGTATAATGGGTTCTCTCCAGGTGGAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTAAACATGTTATTAAAATGTATAATGGGTTCTCTCCAGGTGGAAC  591

seq1  TGTGTCAGCCATTCTGCAGCATCCTCACAATTATCCTACTTACTGCTAGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAGCCATTCTGCAGCATCCTCACAATTATCCTACTTACTGCTAGC  641

seq1  TCAGCTTTGCTTAGTATTTCCAGGAAATCACAAATGAAGGCAAGAACTCT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTTGCTTAGTATTTCCAGGAAATCACAAATGAAGGCAAGAACTCT  691

seq1  ATCTGCCTCCTTCCTCAGGAATATAGAATTGCCTTCAGTCAACATACATC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCTCCTTCCTCAGGAATATAGAATTGCCTTCAGTCAACATACATC  741

seq1  TGGAACCATGGTCCAAATGATCATATACTATACCAGACTGTCTTCAGTTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACCATGGTCCAAATGATCATATACTATACCAGACTGTCTTCAGTTA  791

seq1  TCATCTGTATTCTGGATCCTGCACCTAGAGCACAAACTATTATTATTTGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGTATTCTGGATCCTGCACCTAGAGCACAAACTATTATTATTTGG  841

seq1  TTATCATATTTCCCATTCTTCCTCTAATCTCAGATCTGAAATTCAGCGAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATATTTCCCATTCTTCCTCTAATCTCAGATCTGAAATTCAGCGAT  891

seq1  GTAATTCAAGTCCTGAAATTAATTTTAAATATTATTAAAATTCTCCTCTA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTCAAGTCCTGAAATTAATTTTAAATATTATTAAAATTCTCCTCTA  941

seq1  ACAACTGTAGGTCTTGCAGAATCCTAAAGGGCTAATCATGAATTC  990
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGTAGGTCTTGCAGAATCCTAAAGGGCTAATCATGAATTC  986