BAC Information

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BAC

Clone NameB6Ng01-052K02
Chromosome18 (Build37)
Map Location 57,673,806 - 57,800,874
singlet/doubletdoublet
Overlap gene1700011I03Rik, 4930511M06Rik, 2210409D07Rik
Upstream geneLOC667458, Aldh7a1, Rnuxa, 1700065I17Rik, LOC675171, Lmnb1, March3, C330018D20Rik, Megf10, LOC672445, Prrc1
Downstream geneSlc12a2, 9330166H04Rik, Fbn2, Slc27a6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052K02.bB6Ng01-052K02.g
ACCDH875924DH875925
length1,1381,056
definitionDH875924|Mus musculus domesticus DNA, BAC clone: B6Ng01-052K02, 5' end.DH875925|Mus musculus domesticus DNA, BAC clone: B6Ng01-052K02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,799,727 - 57,800,874)(57,673,806 - 57,674,869)
sequence
gaattccatttctaactttcagctacctgtaagaggtcaaagcaaggtcc
tgcccagcttcatgcattcacccatgcaacaaatactaatcaaatgctcg
cccatccgggaactgcttttggctctgggaatgctgtagaaggaaaaaaa
aattaaagttctgatctttataggggctactttatactagaaaacctaaa
atgctaatttcaggacaaatttgtgatgcacatagatgaaagttcccttc
tcagatacagtaagacacatggaaacctttcctatggtcaatatatttat
cacccccactccaacacacacacacacacacacccctgttgactcagcat
aatttatacattgagtaaaatgggtgggtttgtttccttttattttacac
cagtgtttttgtctataccccaagctcttgctcagtcgtgaaatagtcat
cctcctcctccttatcatcatcatcatcatcacacagcttacaggagaaa
ctcacaagtgtgataaagacagttttaccttaagacacactcatcagaaa
ccacacttgttaaatgtaaatgatcagaactttggtttcaacttagtatt
cagcactagatataggatcctcagttatggatggtattaaatattcaccc
gtgatatttttagggtatgaaagggtatgaatataaaagttgaacaagtt
ttttatgtattatttgattctcaaaatactcaatactattaatatgtttg
atgtataaaatgcatctaaataataaaaatttaagaaaaaactattaaag
aagcataagaaaaaaaagaactttggtttcctgaatatccatcgggagac
aaacaactcaaatatggcctccctcactccctgctcacttgctttctcac
tacttttctccattgccttcacttcccttgacccttgaccattgaccgga
ttttacagacccacactatgcacgtcacattttaatgccctcacactcct
ggcattatgtaatctcagctgagtctcccagaatgctcacaaccctttct
gagcctctcctgcagcaagctctcaacccccaatctcccattctctacgc
atggtggcaacttcctttcctgagaaaccgcagctgaa
gaattccttcacactggggtcttgtgtttggaatctctctttttcttctg
ttaccatctacagaaatcactgcttttaaagctcatgtgattaggtaagg
tcatccaaaaactacttatatcttgttgtcattactggagattgaacctg
ggcctcctgttaggcaaacactctaccaatgaatgatagtaattccccaa
attcccttattttaaatatgaactgactagtaatcctgactacatgtata
ctcctcctttgttatgcaacatgatcatggaagtaatgtctggtaaatgt
catgagaacatttcacaatggtgtctatcatagacaggctggagaaatgc
gttggagtctattattaaatgacgcaggtggcaaaagcatgacaatttgg
ttcttatatctctgatctggaacttgaggcacttggggttatgatttgaa
acactgtcaatagtgagtgtccctgacttacctctactatgctacaggag
tggtcagagagcctctgacttatgctgcaactctagcacagagcccaatg
cctggcacattgcagatgctccaaagagaaggcataaacaaaaaaacggt
gagtgaatgattacatacaacagccgaagatttgtttcttatttaagtaa
tcaggatcccaggtgctagttgctctgcgacagtctcctagaatacggca
ggttagggtagaaaacagtgagtttccagtttccttttgattaatgatac
ctctgtatttatagaacccagaggcacaattttagggcataatttgccag
atggcttggaatatagccatttatcaatagaggcagttaaaaatttagca
caaaagatcttacagtgtatgctgctggcaattaacagattattattatg
aagcttaaaacattgtaagaggaggtaacagttttgaaaattattctaac
agtaccttatttctttctatatacgatttgatctggcttgttctagtttg
cttgtgtggtgtgataccagaacaaagcaactagaggaattttcttagtc
ttacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_57799727_57800874
seq2: B6Ng01-052K02.b_44_1181 (reverse)

seq1  TTCAGCTGCCTGTGTCTCTCAGGGAAGGAGGTTGCACAACCATGCGTAAG  50
      |||||||||    || ||||||| ||||| ||||  | ||||||||||  
seq2  TTCAGCTGC---GGTTTCTCAGGAAAGGAAGTTG--CCACCATGCGTAGA  45

seq1  GAGATGGGAGATTTGGGGGTTGAGAGCTTGCTGCAGGAGAGGCTCAG-AA  99
      || |||||||| ||||||||||||||||||||||||||||||||||| ||
seq2  GA-ATGGGAGA-TTGGGGGTTGAGAGCTTGCTGCAGGAGAGGCTCAGAAA  93

seq1  GGGTTGTTGAGCCATCTGGGAGACTCAGCTGAGATTACATAGATGCCAGG  149
      |||||| |||||  ||||||||||||||||||||||||||| ||||||||
seq2  GGGTTG-TGAGCATTCTGGGAGACTCAGCTGAGATTACATA-ATGCCAGG  141

seq1  AGTGTGGAAGGGCATTAAAATGTGACGTGCATAGTGTGGGTCTGTAAAAT  199
      ||||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTG--AGGGCATTAAAATGTGACGTGCATAGTGTGGGTCTGTAAAAT  189

seq1  CCGGTCAATGGTCAAGGGTCAAGGGAAGTGAAGGCAATGGAGAAAAGTAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTCAATGGTCAAGGGTCAAGGGAAGTGAAGGCAATGGAGAAAAGTAG  239

seq1  TGAGAAAGCAAGTGAGCAGGGAGTGAGGGAGGCCATATTTGAGTTGTTTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAGCAAGTGAGCAGGGAGTGAGGGAGGCCATATTTGAGTTGTTTG  289

seq1  TCTCCCGATGGATATTCAGGAAACCAAAGTTCTTTTTTTTCTTATGCTTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCGATGGATATTCAGGAAACCAAAGTTCTTTTTTTTCTTATGCTTC  339

seq1  TTTAATAGTTTTTTCTTAAATTTTTATTATTTAGATGCATTTTATACATC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAGTTTTTTCTTAAATTTTTATTATTTAGATGCATTTTATACATC  389

seq1  AAACATATTAATAGTATTGAGTATTTTGAGAATCAAATAATACATAAAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATATTAATAGTATTGAGTATTTTGAGAATCAAATAATACATAAAAA  439

seq1  ACTTGTTCAACTTTTATATTCATACCCTTTCATACCCTAAAAATATCACG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTCAACTTTTATATTCATACCCTTTCATACCCTAAAAATATCACG  489

seq1  GGTGAATATTTAATACCATCCATAACTGAGGATCCTATATCTAGTGCTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATATTTAATACCATCCATAACTGAGGATCCTATATCTAGTGCTGA  539

seq1  ATACTAAGTTGAAACCAAAGTTCTGATCATTTACATTTAACAAGTGTGGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAGTTGAAACCAAAGTTCTGATCATTTACATTTAACAAGTGTGGT  589

seq1  TTCTGATGAGTGTGTCTTAAGGTAAAACTGTCTTTATCACACTTGTGAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATGAGTGTGTCTTAAGGTAAAACTGTCTTTATCACACTTGTGAGT  639

seq1  TTCTCCTGTAAGCTGTGTGATGATGATGATGATGATAAGGAGGAGGAGGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTGTAAGCTGTGTGATGATGATGATGATGATAAGGAGGAGGAGGA  689

seq1  TGACTATTTCACGACTGAGCAAGAGCTTGGGGTATAGACAAAAACACTGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATTTCACGACTGAGCAAGAGCTTGGGGTATAGACAAAAACACTGG  739

seq1  TGTAAAATAAAAGGAAACAAACCCACCCATTTTACTCAATGTATAAATTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAATAAAAGGAAACAAACCCACCCATTTTACTCAATGTATAAATTA  789

seq1  TGCTGAGTCAACAGGGGTGTGTGTGTGTGTGTGTGTTGGAGTGGGGGTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGTCAACAGGGGTGTGTGTGTGTGTGTGTGTTGGAGTGGGGGTGA  839

seq1  TAAATATATTGACCATAGGAAAGGTTTCCATGTGTCTTACTGTATCTGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATATTGACCATAGGAAAGGTTTCCATGTGTCTTACTGTATCTGAG  889

seq1  AAGGGAACTTTCATCTATGTGCATCACAAATTTGTCCTGAAATTAGCATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAACTTTCATCTATGTGCATCACAAATTTGTCCTGAAATTAGCATT  939

seq1  TTAGGTTTTCTAGTATAAAGTAGCCCCTATAAAGATCAGAACTTTAATTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTTTCTAGTATAAAGTAGCCCCTATAAAGATCAGAACTTTAATTT  989

seq1  TTTTTTCCTTCTACAGCATTCCCAGAGCCAAAAGCAGTTCCCGGATGGGC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCCTTCTACAGCATTCCCAGAGCCAAAAGCAGTTCCCGGATGGGC  1039

seq1  GAGCATTTGATTAGTATTTGTTGCATGGGTGAATGCATGAAGCTGGGCAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATTTGATTAGTATTTGTTGCATGGGTGAATGCATGAAGCTGGGCAG  1089

seq1  GACCTTGCTTTGACCTCTTACAGGTAGCTGAAAGTTAGAAATGGAATTC  1148
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGCTTTGACCTCTTACAGGTAGCTGAAAGTTAGAAATGGAATTC  1138

seq1: chr18_57673806_57674869
seq2: B6Ng01-052K02.g_69_1124

seq1  GAATTCCTTCACACTGGGGTCTTGTGTTTGGAATCTCTCTTTTTCTTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCACACTGGGGTCTTGTGTTTGGAATCTCTCTTTTTCTTCTG  50

seq1  TTACCATCTACAGAAATCACTGCTTTTAAAGCTCATGTGATTAGGTAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCATCTACAGAAATCACTGCTTTTAAAGCTCATGTGATTAGGTAAGG  100

seq1  TCATCCAAAAACTACTTATATCTTGTTGTCATTACTGGAGATTGAACCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCAAAAACTACTTATATCTTGTTGTCATTACTGGAGATTGAACCTG  150

seq1  GGCCTCCTGTTAGGCAAACACTCTACCAATGAATGATAGTAATTCCCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCCTGTTAGGCAAACACTCTACCAATGAATGATAGTAATTCCCCAA  200

seq1  ATTCCCTTATTTTAAATATGAACTGACTAGTAATCCTGACTACATGTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTTATTTTAAATATGAACTGACTAGTAATCCTGACTACATGTATA  250

seq1  CTCCTCCTTTGTTATGCAACATGATCATGGAAGTAATGTCTGGTAAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTTTGTTATGCAACATGATCATGGAAGTAATGTCTGGTAAATGT  300

seq1  CATGAGAACATTTCACAATGGTGTCTATCATAGACAGGCTGGAGAAATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGAACATTTCACAATGGTGTCTATCATAGACAGGCTGGAGAAATGC  350

seq1  GTTGGAGTCTATTATTAAATGACGCAGGTGGCAAAAGCATGACAATTTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGTCTATTATTAAATGACGCAGGTGGCAAAAGCATGACAATTTGG  400

seq1  TTCTTATATCTCTGATCTGGAACTTGAGGCACTTGGGGTTATGATTTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATATCTCTGATCTGGAACTTGAGGCACTTGGGGTTATGATTTGAA  450

seq1  ACACTGTCAATAGTGAGTGTCCCTGACTTACCTCTACTATGCTACAGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTCAATAGTGAGTGTCCCTGACTTACCTCTACTATGCTACAGGAG  500

seq1  TGGTCAGAGAGCCTCTGACTTATGCTGCAACTCTAGCACAGAGCCCAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCAGAGAGCCTCTGACTTATGCTGCAACTCTAGCACAGAGCCCAATG  550

seq1  CCTGGCACATTGCAGATGCTCCAAAGAGAAGGCATAAACAAAAAAACGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCACATTGCAGATGCTCCAAAGAGAAGGCATAAACAAAAAAACGGT  600

seq1  GAGTGAATGATTACATACAACAGCCGAAGATTTGTTTCTTATTTAAGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAATGATTACATACAACAGCCGAAGATTTGTTTCTTATTTAAGTAA  650

seq1  TCAGGATCCCAGGTGCTAGTTGCTCTGCGACAGTCTCCTAGAATACGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATCCCAGGTGCTAGTTGCTCTGCGACAGTCTCCTAGAATACGGCA  700

seq1  GGTTAGGGTAGAAAACAGTGAGTTTCCAGTTTCCTTTTGATTAATGATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGGGTAGAAAACAGTGAGTTTCCAGTTTCCTTTTGATTAATGATAC  750

seq1  CTCTGTATTTATAGAACCCAGAGGCACAATTTTAGGGCATAATTTGCCAA  800
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTCTGTATTTATAGAACCCAGAGGCACAATTTTAGGGCATAATTTGCC-A  799

seq1  GATGGCTTGGAATATAGCCATTTATCAATAGAGGCAGTTAATAAATTTAG  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GATGGCTTGGAATATAGCCATTTATCAATAGAGGCAGTTAA-AAATTTAG  848

seq1  CACAAAAGATCTTACAGTGTTATGCTGCT-GCAATTAACAGATTATTATT  899
      ||||||||||||||||||| ||||||||| ||||||||||||||||||||
seq2  CACAAAAGATCTTACAGTG-TATGCTGCTGGCAATTAACAGATTATTATT  897

seq1  ATGAAGCTTAAAACATTGTAAGAGGAGGTAACAGTTTTGAAAATTATTCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCTTAAAACATTGTAAGAGGAGGTAACAGTTTTGAAAATTATTCT  947

seq1  AACAGTACCTTTATTTCTTTCTAATATACGATTTGAATCT-GCCTGTTCT  998
      ||||||||| |||||||||||| |||||||||||| |||| || ||||||
seq2  AACAGTACC-TTATTTCTTTCT-ATATACGATTTG-ATCTGGCTTGTTCT  994

seq1  AGTTTGCTTGTGTTGCTGTGATAGCCAGACCAAAAGCAACTAGAGGGAAA  1048
      |||||||||||| || ||||||| ||||| | |||||||||||| |||| 
seq2  AGTTTGCTTGTG-TGGTGTGATA-CCAGAAC-AAAGCAACTAGA-GGAAT  1040

seq1  TTTCTTTGGCTTACAG  1064
      |||||| | |||||||
seq2  TTTCTTAGTCTTACAG  1056