MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-053D02
Chromosome	18 (Build37)
Map Location	6,581,261 - 6,704,162
singlet/doublet	doublet
Overlap gene	4921524L21Rik, LOC100039583
Upstream gene	LOC100039442, Zeb1, EG664925, Arhgap12, Kif5b, LOC100039469, EG621100, LOC665028, EG622152, Epc1, LOC665047
Downstream gene	EG665053, Rab18, LOC620787, LOC100039635, Mkx, LOC664778, Armc4, Mpp7, EG622384, LOC100039562
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039442 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039442
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Zeb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21417 MGI:1344313
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG664925 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664925 MGI:3647250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Arhgap12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75415 MGI:1922665
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Kif5b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16573 MGI:1098268
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039469 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039469
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs

name	EG621100 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621100 MGI:3646174
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 766 ESTs, 6 Proteins

name	LOC665028 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665028
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG622152 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622152 MGI:3648803
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Epc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13831 MGI:1278322
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC665047 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665047
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 ESTs, 6 Proteins pseudo : _no_value

name	4921524L21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70901 MGI:1918151
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 1 Protein

name	LOC100039583 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039583
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 43 ESTs

name	EG665053 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665053 MGI:3648356
definition	note : predicted gene, EG665053 pseudo : _no_value

name	Rab18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19330 MGI:102790
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC620787 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620787
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100039635 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039635
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Mkx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210719 MGI:2687286
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC664778 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664778
definition	note : 2410129H14Rik-like pseudo : _no_value

name	Armc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74934 MGI:1922184
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mpp7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75739 MGI:1922989
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622384 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622384 MGI:3644282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 71 ESTs, 14 Proteins

name	LOC100039562 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039562
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins

name	LOC100039442 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269608 GeneID:100039442
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100039442 transcript_id : XM_001472928.1

name	Zeb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130126 GeneID:21417 MGI:1344313
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger E-box binding homeobox 1 transcript_id : NM_011546.2

name	EG664925 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94404241 GeneID:664925 MGI:3647250
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG664925 transcript_id : XM_974871.1

name	Arhgap12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89242138 GeneID:75415 MGI:1922665
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 12 transcript_id : NM_029277.2

name	Arhgap12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89242142 GeneID:75415 MGI:1922665
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 12 transcript_id : NM_001039692.1

name	Kif5b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61657920 GeneID:16573 MGI:1098268
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member 5B transcript_id : NM_008448.2

name	LOC100039469 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269610 GeneID:100039469
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs product : hypothetical protein LOC100039469 transcript_id : XM_001472943.1

name	EG621100 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94404260 GeneID:621100 MGI:3646174
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 765 ESTs, 6 Proteins product : predicted gene, EG621100, transcript variant 1 transcript_id : XM_885496.2

name	Epc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679654 GeneID:13831 MGI:1278322
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : enhancer of polycomb homolog 1 (Drosophila) transcript_id : NM_007935.1

name	Epc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350580 GeneID:13831 MGI:1278322
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : enhancer of polycomb homolog 1 (Drosophila) transcript_id : NM_027497.2

name	4921524L21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149269616 GeneID:70901 MGI:1918151
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein product : RIKEN cDNA 4921524L21 gene, transcript variant 2 transcript_id : XM_896291.3

name	LOC100039583 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269617 GeneID:100039583
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 43 ESTs product : similar to gag protein transcript_id : XM_001473270.1

name	Rab18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802172 GeneID:19330 MGI:102790
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB18, member RAS oncogene family transcript_id : NM_181070.3

name	Rab18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755257 GeneID:19330 MGI:102790
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB18, member RAS oncogene family transcript_id : NM_011225.1

name	LOC620787 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269612 GeneID:620787
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical LOC620787 transcript_id : XM_896027.3

name	LOC100039635 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269619 GeneID:100039635
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039635 transcript_id : XM_001473343.1

name	Mkx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142364700 GeneID:210719 MGI:2687286
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mohawk transcript_id : NM_177595.3

name	Armc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487092 GeneID:74934 MGI:1922184
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : armadillo repeat containing 4 transcript_id : NM_001081393.1

name	Mpp7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486852 GeneID:75739 MGI:1922989
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7) transcript_id : NM_001081287.1

name	EG622384 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94404264 GeneID:622384 MGI:3644282
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 71 ESTs, 14 Proteins product : predicted gene, EG622384 transcript_id : XM_886827.2

name	LOC100039562 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149269614 GeneID:100039562
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins product : similar to ZK84.1 transcript_id : XM_001473116.1

name	LOC100039442 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269609 GeneID:100039442
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472978.1

name	Zeb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6756073 CCDS:CCDS29039.1 GeneID:21417 MGI:1344313
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007417 - central nervous system development [Evidence IGI]; GO:0048598 - embryonic morphogenesis [Evidence IGI]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : transcription factor 8 product : zinc finger homeobox 1a protein_id : NP_035676.1

name	EG664925 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94404242 GeneID:664925 MGI:3647250
definition	codon_start : 1 product : similar to pORF1 protein_id : XP_979965.1

name	Arhgap12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89242139 GeneID:75415 MGI:1922665
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : Rho GTPase activating protein 12 isoform 2 protein_id : NP_083553.2

name	Arhgap12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:89242143 GeneID:75415 MGI:1922665
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : Rho GTPase activating protein 12 isoform 1 protein_id : NP_001034781.1

name	Kif5b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61657921 GeneID:16573 MGI:1098268
definition	GO_component : GO:0035253 - ciliary rootlet [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005871 - kinesin complex [Evidence TAS]; GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence IEA]; GO:0043005 - neuron projection [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence TAS] [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007028 - cytoplasm organization and biogenesis [Evidence IMP]; GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0007017 - microtubule-based process [Evidence TAS]; GO:0006839 - mitochondrial transport [Evidence TAS] codon_start : 1 note : kinesin heavy chain member 5B, ubiquitous product : kinesin family member 5B protein_id : NP_032474.2

name	LOC100039469 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269611 GeneID:100039469
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472993.1

name	EG621100 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82995668 GeneID:621100 MGI:3646174
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_890589.1

name	Epc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679655 GeneID:13831 MGI:1278322
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0001558 - regulation of cell growth [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : enhancer of polycomb homolog 1 isoform 1 protein_id : NP_031961.1

name	Epc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27532963 CCDS:CCDS29041.1 GeneID:13831 MGI:1278322
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0001558 - regulation of cell growth [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : enhancer of polycomb homolog 1 isoform 2 protein_id : NP_081773.1

name	4921524L21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82995673 GeneID:70901 MGI:1918151
definition	codon_start : 1 product : hypothetical protein LOC70901 isoform 2 protein_id : XP_901384.1

name	LOC100039583 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269618 GeneID:100039583
definition	codon_start : 1 product : similar to gag protein protein_id : XP_001473320.1

name	Rab18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755258 CCDS:CCDS29044.1 GeneID:19330 MGI:102790
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : RAB18, member RAS oncogene family protein_id : NP_035355.1

name	Rab18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30841008 CCDS:CCDS29044.1 GeneID:19330 MGI:102790
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : RAB18, member RAS oncogene family protein_id : NP_851415.1

name	LOC620787 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82997675 GeneID:620787
definition	codon_start : 1 product : hypothetical protein protein_id : XP_901120.1

name	LOC100039635 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269620 GeneID:100039635
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473393.1

name	Mkx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243954 GeneID:210719 MGI:2687286
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007517 - muscle development [Evidence IEP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : iroquois homeobox protein-like 1 product : mohawk protein_id : NP_808263.1

name	Armc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487093 GeneID:74934 MGI:1922184
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : armadillo repeat containing 4 protein_id : NP_001074862.1

name	Mpp7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486853 GeneID:75739 MGI:1922989
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 product : membrane protein, palmitoylated 7 protein_id : NP_001074756.1

name	EG622384 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82995797 GeneID:622384 MGI:3644282
definition	codon_start : 1 product : similar to keratinocyate lipid-binding protein protein_id : XP_891920.1

name	LOC100039562 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149269615 GeneID:100039562
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473166.1

name	LOC665028 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665028
definition	number : 1 pseudo : _no_value

name	EG622152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622152
definition	number : 2 pseudo : _no_value

name	EG622152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622152
definition	number : 1 pseudo : _no_value

name	LOC665047 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149269613 GeneID:665047
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 ESTs, 6 Proteins product : similar to neuroendocrine differentiation factor pseudo : _no_value transcript_id : XR_031091.1

clone name	MSMg01-356A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-165F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526P13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-095C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-209E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512F23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-312C13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-486E16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-263E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067I11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-498D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120H04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-538M21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-045H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157G19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197C01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-547O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-163F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-187L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072M21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-155C09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-505N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-192B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128J10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-053D02.b	B6Ng01-053D02.g
ACC	DH876314	DH876315
length	1,103	708
definition	DH876314\|Mus musculus domesticus DNA, BAC clone: B6Ng01-053D02, 5' end.	DH876315\|Mus musculus domesticus DNA, BAC clone: B6Ng01-053D02, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(6,581,261 - 6,582,260)	(6,703,456 - 6,704,162)
sequence	gaattcctgatttggttcaaataattgtaggaagaaagtttgaagagatg gtctaagttgttttgctagaaagatgttataaagttagaatcaagaatag aatgttcctgttcctcataatagtaagcaaaggctgcataataaagtaca atgagcttttataattatactaaaaagaaaaacagacttggatctaattt gtgttcagggaaaaacctttaggaccaaggaagaagctacaggtgtgcac tatgataaggcaaggccatgtgagaactgctttgaaattatagtgagcat atagaatgaaactctgctttgaacttaatatcaacatccttctgtaattc ccatttataatgttttatctctgatgtaattttctaagagcatttgtcta agaaggtgtaaaaaggccaaagaaaagaaataaggttggtggcttggggg tttctgctccatccatccatccatccatccatccaaatgtatatgcctgt ttgtttacatgtacatgtgaagttatataggtatgtatgtaagtatgcat gaacacttgtggagttgatgagacagatgactgggtctggacagagtgtg tgtgtatgaatctatgtgtgtctgtgcatatttgcaaattaaaggatttt aattcttttttttctttgtaacattttatatataaggtaattcttttttt acacagagaaccttcttgtctaaaagctataaaaacctgaaagcaataaa taaaaggtggtgtagccattttctgtttcatctggtgtgtgtgttttctg tgtgactcctttcttttctggtttacaaagagttaccacccaagtcagta aggggctcctggcttcctgtccagagaagggagcattagtataaatactt acctattccctccccaactcccttttagccacaatgtccagaggcctgca gctttggcttcagtaactaaagccaagataggtaaatgttattgtagaaa ccacttcttatctctcataagaccgagtcttacaccctgctgatgctttc cccttagctaccttcaggatgaccagagctctgagctgggcctctggctg aac	gaattctgggattactgggttttcctgttaagggactggtgggtttgttt tgtcttgttttgtttttattggctttgtctttttgttgttgttgtttttt tatgaccaggaatctgttgggaatctgtagcaagtttagggatccctccc accccgccccgccccctgcctggttttgccttggtgccaagtcagggtta tgctgagtcattagtaaggggtgctacttgacacagatcaggaggtgtgg ccttgttggaggaagtgtgtcactggaggtaggctccttgacaccccaat tttcaaagcatgcccactccaccccattttaacttggagagtatgcttta ttccaaacctgagtacttgctggaggtggtaattagtcttctcaaagact agaatttcttcagtcatttgctggccaggaagaaagagctttgaagtcct tgaagatctaaagagtgcttgaacacaaacccaaggcagtgggggaagga caggaggtacacagggaaagatcatcaagccataatggtatcaagcccag agccctactctgccagataccaggatacatgtggacttttgcagctgagt gaaaaaacaaaacaaaacaaaacaaaaccgaaaacaatcttcagccctag tcatttgagcagatttttctaatgcttgtaaattaacacggggggtggga gggtgggg
quality values	Open. Hide. 42 15 30 24 61 61 61 34 61 43 38 61 61 61 47 61 61 37 27 61 61 61 61 61 61 61 20 12 16 14 15 15 14 10 20 25 33 47 49 55 61 61 61 61 61 61 61 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 33 36 31 36 24 30 21 30 44 29 36 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 55 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 55 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 55 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 61 47 61 61 61 61 61 61 61 47 61 61 61 55 61 61 43 47 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 39 61 61 61 61 61 61 61 61 47 61 61 49 61 61 61 47 53 61 61 61 61 61 50 45 53 61 61 61 61 61 61 53 61 45 61 61 53 61 37 61 37 53 61 43 33 50 61 61 61 43 61 61 61 61 61 53 24 23 13 19 21 24 61 53 52 50 33 50 47 39 50 32 35 35 38 53 40 22 61 61 40 61 61 30 42 61 32 61 61 61 61 61 61 40 61 23 61 47 61 39 45 42 61 39 42 42 53 57 39 40 50 50 53 53 45 53 50 53 30 40 53 45 57 42 27 57 57 53 57 50 53 43 37 17 47 36 33 57 39 47 24 34 50 53 32 45 52 53 35 23 23 14 12 17 53 52 23 50 45 29 50 13 50 42 47 38 35 41 45 53 38 57 53 30 37 28 45 39 22 44 43 52 22 47 46 57 50 35 27 52 37 22 53 25 42 20 41 32 18 50 57 57 24 52 38 53 30 53 36 38 27 35 50 40 53 32 29 57 42 53 25 52 25 53 31 25 57 17 37 28 31 33 36 42 38 24 12 37 38 37 27 52 10 27 42 25 30 11 17 20 31 30 24 52 52 40 40 29 52 25 10 36 23 35 8 19 24 30 29 48 42 23 13 29 22 34 30 29 17 24 19 21 32 37 26 10 12 32 22 11 8 37 37 10 7 5 8 12 12 23 9 23 30 19 10 26 14 33 26 30 45 17 43 12 18 23 48 11 16 8 24 44 13 22 45 30 13 5 9 17 8 21 29 26 24 12 24 33 23 51 28 29 23 48 48 32 19 14 29 29 21 23 18 23 29 35 32 21 12 22 6 29 26 21 12 11 7 7 8 16 14 6 31 18 30 21 20 14 22 29 20 13 26 20 5 5 9 14 23 27 15 25 12 18 29 29 20 29 20 12 32 20 17 28 16 18 15 13 27 26 20 16 27 29 24 46 32 5 44 17 23 9 14 18 7 5 13 9 38 51 15 46 10 9 17 8 6 8 7 29 15 19 12 14 9 14 17 9 8 19 9 9 31 20 26 8 15 6 14 28 26 14 14 8 7 13 36 26 6 11 26 18 29 23 9 35 27 15 7 17 7 33 35 15 17 5 5 4 16 30 19 31 22 19 13 19 21 5 4 13 25 12 23 4 20 8 8 8 6 15 11 12 4 8 4 4 5 9 10 34 10 11 9 16 13 11 12 17 11 5 14 10 17 6	Open. Hide. 61 61 49 59 61 61 17 20 20 13 8 24 36 23 34 30 44 50 59 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 49 61 61 61 59 61 61 61 55 59 61 61 52 45 41 28 30 28 28 35 35 49 55 55 59 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 59 55 59 61 59 59 59 59 44 59 59 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 59 61 59 59 52 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 59 61 61 61 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 59 61 59 59 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 59 61 61 61 61 59 59 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 49 43 52 43 27 43 59 61 61 59 59 59 59 59 61 59 61 61 61 61 43 61 61 61 61 61 61 55 55 55 52 49 55 61 61 61 61 61 61 61 61 61 61 61 47 61 61 52 55 55 52 61 55 61 55 61 55 61 61 61 52 52 52 52 43 52 61 61 61 61 61 61 61 55 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 47 55 55 61 61 61 50 55 55 61 55 61 43 55 61 55 61 50 53 61 50 50 61 61 50 61 53 61 61 52 61 53 43 53 50 52 33 31 61 50 61 61 61 61 61 61 61 52 61 61 53 53 50 53 61 52 53 39 43 52 53 47 45 50 61 61 43 61 46 53 61 61 61 39 61 50 50 61 47 53 45 43 50 50 52 47 53 61 52 50 42 24 45 50 39 39 30 38 47 34 53 53 52 47 53 53 53 53 47 45 53 46 47 47 57 50 52 52 53 53 53 53 45 53 53 57 53 53 53 53 52 53 40 42 46 47 52 50 42 47 50 52 45 45 53 53 47 37 47 53 35 30 57 53 57 53 52 53 53 45 53 57 50 57 53 38 37 28 50 47 52 52 53 38 37 50 45 53 53 47 45 53 26 45 53 30 52 19 50 52 53 34 53 33 38 43 50 53 24 45 52 53 45 41 10 8 8 7 8 17 41 30 37 24 38 37 35 23 21 16 37 30 34 25 11 38 46 38 37 46 21 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr18_6581261_6582260
seq2: B6Ng01-053D02.b_159_1148

seq1  CTCATAATAGTAAGCAAAGGCTGCATAATAAAGTACAATGAGCTTTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAATAGTAAGCAAAGGCTGCATAATAAAGTACAATGAGCTTTTATA  50

seq1  ATTATACTAAAAAGAAAAACAGACTTGGATCTAATTTGTGTTCAGGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACTAAAAAGAAAAACAGACTTGGATCTAATTTGTGTTCAGGGAAA  100

seq1  AACCTTTAGGACCAAGGAAGAAGCTACAGGTGTGCACTATGATAAGGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTAGGACCAAGGAAGAAGCTACAGGTGTGCACTATGATAAGGCAA  150

seq1  GGCCATGTGAGAACTGCTTTGAAATTATAGTGAGCATATAGAATGAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGTGAGAACTGCTTTGAAATTATAGTGAGCATATAGAATGAAACT  200

seq1  CTGCTTTGAACTTAATATCAACATCCTTCTGTAATTCCCATTTATAATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTGAACTTAATATCAACATCCTTCTGTAATTCCCATTTATAATGT  250

seq1  TTTATCTCTGATGTAATTTTCTAAGAGCATTTGTCTAAGAAGGTGTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTCTGATGTAATTTTCTAAGAGCATTTGTCTAAGAAGGTGTAAAA  300

seq1  AGGCCAAAGAAAAGAAATAAGGTTGGTGGCTTGGGGGTTTCTGCTCCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAAAGAAAAGAAATAAGGTTGGTGGCTTGGGGGTTTCTGCTCCATC  350

seq1  CATCCATCCATCCATCCATCCAAATGTATATGCCTGTTTGTTTACATGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATCCATCCATCCATCCAAATGTATATGCCTGTTTGTTTACATGTA  400

seq1  CATGTGAAGTTATATAGGTATGTATGTAAGTATGCATGAACACTTGTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAAGTTATATAGGTATGTATGTAAGTATGCATGAACACTTGTGGA  450

seq1  GTTGATGAGACAGATGACTGGGTCTGGACAGAGTGTGTGTGTATGAATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATGAGACAGATGACTGGGTCTGGACAGAGTGTGTGTGTATGAATCT  500

seq1  ATGTGTGTCTGTGCATATTTGCAAATTAAAGGATTTTAATTCTTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTCTGTGCATATTTGCAAATTAAAGGATTTTAATTCTTTTTTTT  550

seq1  CTTTGTAACATTTTATATATAAGGTAATTCTTTTTTTACACAGAGAACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAACATTTTATATATAAGGTAATTCTTTTTTTACACAGAGAACCT  600

seq1  TCTTGTCTAAAAGCTATAAAAACCTGAAAGCAATAAATAAAAGGTGGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCTAAAAGCTATAAAAACCTGAAAGCAATAAATAAAAGGTGGTGT  650

seq1  AGCCATTTTCTGTTTCATCTGGTGTGTGTGTTTTCTGTGTGACTCCTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTTTCTGTTTCATCTGGTGTGTGTGTTTTCTGTGTGACTCCTTTC  700

seq1  TTTTCTGGTTTACAAAGAGTTAACCACCCAAGTCAGTAAGGGGCTCCTGG  750
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTTTCTGGTTTACAAAGAGTT-ACCACCCAAGTCAGTAAGGGGCTCCTGG  749

seq1  CTCCCTGTCCAGAGAAGGGAGCATTAGTAATAAATACTTTACCTATTTCC  800
      || ||||||||||||||||||||||||| |||||||| ||||||| ||||
seq2  CTTCCTGTCCAGAGAAGGGAGCATTAGT-ATAAATAC-TTACCTA-TTCC  796

seq1  CTCCCCAACTCCCTTTTAGCAACAAGTGTCCAGAGGCCTGCAGCTTCTGG  850
      |||||||||||||||||||| |||| |||||||||||||||||||| |||
seq2  CTCCCCAACTCCCTTTTAGCCACAA-TGTCCAGAGGCCTGCAGCTT-TGG  844

seq1  CTTCAGTAACTTAAAGCCAAGATAGGTAAAGGTTATTGTAGAAACCCACT  900
      |||||||||| ||||||||||||||||||| |||||||||||||||   |
seq2  CTTCAGTAAC-TAAAGCCAAGATAGGTAAATGTTATTGTAGAAACCACTT  893

seq1  CTTATCTCTCATAAGACCGAGTCTTACA-CCTGCTGATGCTTTTCCCCTT  949
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  CTTATCTCTCATAAGACCGAGTCTTACACCCTGCTGATGC-TTTCCCCTT  942

seq1  CAGCTACCTTCAAGATAGAACCAGAGCTCTGAGCT-GGCCTCTGGCATGA  998
       ||||||||||| |||   |||||||||||||||| |||||||||| |||
seq2  -AGCTACCTTCAGGAT--GACCAGAGCTCTGAGCTGGGCCTCTGGC-TGA  988

seq1  AC  1000
      ||
seq2  AC  990

seq1: chr18_6703456_6704162
seq2: B6Ng01-053D02.g_69_776 (reverse)

seq1  CCCCACCCTCCCACCCCCCGTGTTAATTTACAAGCATTAG-AAAATCTGC  49
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCCCACCCTCCCACCCCCCGTGTTAATTTACAAGCATTAGAAAAATCTGC  50

seq1  TCAAATGACTAGGGCTGAAGATTGTTTTCGGTTTTGTTTTGTTTTGTTTT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGACTAGGGCTGAAGATTGTTTTCGGTTTTGTTTTGTTTTGTTTT  100

seq1  GTTTTTTCACTCAGCTGCAAAAGTCCACATGTATCCTGGTATCTGGCAGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTCACTCAGCTGCAAAAGTCCACATGTATCCTGGTATCTGGCAGA  150

seq1  GTAGGGCTCTGGGCTTGATACCATTATGGCTTGATGATCTTTCCCTGTGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGCTCTGGGCTTGATACCATTATGGCTTGATGATCTTTCCCTGTGT  200

seq1  ACCTCCTGTCCTTCCCCCACTGCCTTGGGTTTGTGTTCAAGCACTCTTTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTGTCCTTCCCCCACTGCCTTGGGTTTGTGTTCAAGCACTCTTTA  250

seq1  GATCTTCAAGGACTTCAAAGCTCTTTCTTCCTGGCCAGCAAATGACTGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCAAGGACTTCAAAGCTCTTTCTTCCTGGCCAGCAAATGACTGAA  300

seq1  GAAATTCTAGTCTTTGAGAAGACTAATTACCACCTCCAGCAAGTACTCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCTAGTCTTTGAGAAGACTAATTACCACCTCCAGCAAGTACTCAG  350

seq1  GTTTGGAATAAAGCATACTCTCCAAGTTAAAATGGGGTGGAGTGGGCATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGAATAAAGCATACTCTCCAAGTTAAAATGGGGTGGAGTGGGCATG  400

seq1  CTTTGAAAATTGGGGTGTCAAGGAGCCTACCTCCAGTGACACACTTCCTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAAAATTGGGGTGTCAAGGAGCCTACCTCCAGTGACACACTTCCTC  450

seq1  CAACAAGGCCACACCTCCTGATCTGTGTCAAGTAGCACCCCTTACTAATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGGCCACACCTCCTGATCTGTGTCAAGTAGCACCCCTTACTAATG  500

seq1  ACTCAGCATAACCCTGACTTGGCACCAAGGCAAAACCAGGCAGGGGGCGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGCATAACCCTGACTTGGCACCAAGGCAAAACCAGGCAGGGGGCGG  550

seq1  GGCGGGGTGGGAGGGATCCCTAAACTTGCTACAGATTCCCAACAGATTCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGGGTGGGAGGGATCCCTAAACTTGCTACAGATTCCCAACAGATTCC  600

seq1  TGGTCATAAAAAAACAACAACAACAAAAAGACAAAGCCAATAAAAACAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATAAAAAAACAACAACAACAAAAAGACAAAGCCAATAAAAACAAA  650

seq1  ACAAGACAAAACAAACCCACCAGTCCCTTAACAGGAAAACCCAGTAATCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGACAAAACAAACCCACCAGTCCCTTAACAGGAAAACCCAGTAATCC  700

seq1  CAGAATTC  707
      ||||||||
seq2  CAGAATTC  708

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BAC

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Alignment Information