BAC Information

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BAC

Clone NameB6Ng01-053K14
Chromosome18 (Build37)
Map Location 51,757,271 - 51,946,563
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042373, LOC100042385, Prr16
Downstream geneEG240289, Ftmt, Srfbp1, Lox, Zfp474, 1700034E13Rik, Gykl1, Sncaip, A730036E13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053K14.bB6Ng01-053K14.g
ACCDH876647DH876648
length1,077965
definitionDH876647|Mus musculus domesticus DNA, BAC clone: B6Ng01-053K14, 5' end.DH876648|Mus musculus domesticus DNA, BAC clone: B6Ng01-053K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,757,271 - 51,758,357)(51,945,594 - 51,946,563)
sequence
gaattccatatttatcttcccccagtaattatagtcatcatccataaaac
taatatgaagttgagtttctctgccaattgtctaacatttagtaccttag
tgtaatgtctaagtgtacacttagagatagttttgtgcgtgaaaagatgt
tgtaccgctcttcatagaacaagagaagggcaatatgaatgattcagaga
tgaagagccaaaatttcctttctgcatccatcttccctactcactgagat
ggtcctctggggcaccctcaactgccctgagcagtgtgctgtccctgctg
aacccccatccttctgtcacgtctcagcccacctttattagacccgctga
tctggaaacatacagcctaaggttacccatcagaggcctgccacacctta
gaacccctcccaatacctactacaacaggaacatccagggactaaagcca
tcccgatgagtaacagacctcaaaagaacacaatcaagaaaaacgagagc
aatatgataccttcagagcacagataacctactacaaccagccctggata
tccttacacaacaaaggcacaagaaaatgcttgcctttaatccaatctta
caatgatgaaagaggtcttttaaagatgaaacgaataaatccactaaata
aatgcaggaaatgaactcaaacaggtagaggcctttaaagtggaaacaaa
tatatccctttaagaaaatgcagaaaaatagaattaaagagagatgaaga
gcctgaagccttaatatggacagtccctcaaggtttgcaatgatgagaag
atgtttgagttactgttgtggttatggggaagaagcaataaagcagaacc
attgaaaactgaatgctcgcttacaaagacccaagggcacagaggaacag
catgccagagatttgttctctagtgtgatgatgggatttcgatatttatg
tttatttttttttcttttaattgaccaaaatgcagatgctatcattcgtg
atcttccgaataaggaaagttccggatctactttgatgtgtgaaggctat
gcagaacatggaaacaagtcctaactt
gaattcaatggaaaaaaaaaaaaagaatcctaggattttaagggaacaaa
tcggatggaatctgtcatgaactgaagggctcaagcagcccccttaccct
ttctcagccgtatttactctctgattttgcaaatggcgagttttatttgc
tccccggcatttttctaaaacattaaacctgacattactgaacacttgta
gatcttaagtgtgaaatgcctctgtacataaagcattttcagggcttaat
attttaggccttagaactcctgaagcatgaagtttcttggaaaccataat
atttgaaattttactagtcatttaaaatgttagatgtttattccatgccc
taaatacagctggtagttcagacaggtatactgtaccagcctttatatga
tattaataaaaaaatctgattctctctataaagttttattatataggaaa
atatactctatacatttttaattaattttaacatagataatcatctatcg
ttacttgcttaatatcactttgaaagaatattttgaaatacttcctatga
tatcatatgtaggattatgtatataaaatttaaaatgttttgccttactt
tttatatcatcaaaattatccctcaggagaatataaatcttatttagatg
aacaagtctttctttgtaaaggacataaacgttggtgaaaaagggatagc
gtaggagtgtggtttcaattgacccagtacaaaggatgtgagcaatagag
agggttgaacaaatagagtttctacatggagcagtctaaagagatacttg
aaagagcatctccacatcttgtttctattatggaattttttttattgtct
aattgggtgacccatgggtggccagattttgaaaagtattctgaatgtct
taaagtgatttttgaagagataattaattggctagaatcttcctaaggag
aatggcctaaatatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_51757271_51758357
seq2: B6Ng01-053K14.b_40_1116

seq1  GAATTCCATATTTATCTTCCCCCAGTAATTATAGTCATCATCCATAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATATTTATCTTCCCCCAGTAATTATAGTCATCATCCATAAAAC  50

seq1  TAATATGAAGTTGAGTTTCTCTGCCAATTGTCTAACATTTAGTACCTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGAAGTTGAGTTTCTCTGCCAATTGTCTAACATTTAGTACCTTAG  100

seq1  TGTAATGTCTAAGTGTACACTTAGAGATAGTTTTGTGCGTGAAAAGATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGTCTAAGTGTACACTTAGAGATAGTTTTGTGCGTGAAAAGATGT  150

seq1  TGTACCGCTCTTCATAGAACAAGAGAAGGGCAATATGAATGATTCAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCGCTCTTCATAGAACAAGAGAAGGGCAATATGAATGATTCAGAGA  200

seq1  TGAAGAGCCAAAATTTCCTTTCTGCATCCATCTTCCCTACTCACTGAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGCCAAAATTTCCTTTCTGCATCCATCTTCCCTACTCACTGAGAT  250

seq1  GGTCCTCTGGGGCACCCTCAACTGCCCTGAGCAGTGTGCTGTCCCTGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTCTGGGGCACCCTCAACTGCCCTGAGCAGTGTGCTGTCCCTGCTG  300

seq1  AACCCCCATCCTTCTGTCACGTCTCAGCCCACCTTTATTAGACCCGCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCATCCTTCTGTCACGTCTCAGCCCACCTTTATTAGACCCGCTGA  350

seq1  TCTGGAAACATACAGCCTAAGGTTACCCATCAGAGGCCTGCCACACCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAACATACAGCCTAAGGTTACCCATCAGAGGCCTGCCACACCTTA  400

seq1  GAACCCCTCCCAATACCTACTACAACAGGAACATCCAGGGACTAAAGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCCTCCCAATACCTACTACAACAGGAACATCCAGGGACTAAAGCCA  450

seq1  TCCCGATGAGTAACAGACCTCAAAAGAACACAATCAAGAAAAACGAGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGATGAGTAACAGACCTCAAAAGAACACAATCAAGAAAAACGAGAGC  500

seq1  AATATGATACCTTCAGAGCACAGATAACCTACTACAACCAGCCCTGGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGATACCTTCAGAGCACAGATAACCTACTACAACCAGCCCTGGATA  550

seq1  TCCTTACACAACAAAGGCACAAGAAAATGCTTGCCTTTAATCCAATCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACACAACAAAGGCACAAGAAAATGCTTGCCTTTAATCCAATCTTA  600

seq1  CAATGATGAAAGAGGTC-TTTAAAGATGAAACGAATAAATCCACTAAATA  649
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CAATGATGAAAGAGGTCTTTTAAAGATGAAACGAATAAATCCACTAAATA  650

seq1  AATGCAGGAAATGAACTCAAACAGGTAGAGGCCTTTAAAGTGGAAACAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGGAAATGAACTCAAACAGGTAGAGGCCTTTAAAGTGGAAACAAA  700

seq1  TATATCCC-TTAAGAAAATGCAGAAAAATAGAATTAAAGAGAGATGAAGA  748
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCCTTTAAGAAAATGCAGAAAAATAGAATTAAAGAGAGATGAAGA  750

seq1  GCCTGAAGCCTTAATATGGACAGTCCCTCAAGGTTTGCAATGATGAGAAG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAGCCTTAATATGGACAGTCCCTCAAGGTTTGCAATGATGAGAAG  800

seq1  ATGTTTGAGTTACTGTTGTGGTTATGGGGAAGAAGCAATAAAGCAGAACC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGAGTTACTGTTGTGGTTATGGGGAAGAAGCAATAAAGCAGAACC  850

seq1  ATTGAAAACTGAATGCTCGCTTACAAAGACACCAGGGCACAGAGGAACAG  898
      |||||||||||||||||||||||||||||| | |||||||||||||||||
seq2  ATTGAAAACTGAATGCTCGCTTACAAAGACCCAAGGGCACAGAGGAACAG  900

seq1  CATGCCAGAGAATTGTTCTCTAGTG-GATGATGGGATTTCGATACTTATG  947
      ||||||||||| ||||||||||||| |||||||||||||||||| |||||
seq2  CATGCCAGAGATTTGTTCTCTAGTGTGATGATGGGATTTCGATATTTATG  950

seq1  TTTATTTTTTTTTACTTTTTAAATGACCAAAATGCAGATGCTAATTCATT  997
      |||||||||||||   |||||| ||||||||||||||||||||  |||||
seq2  TTTATTTTTTTTT--CTTTTAATTGACCAAAATGCAGATGCTA--TCATT  996

seq1  CTGTGATCTTCCAGATAAAGGAAAGTTTCCAGAATCTAACATTGGATGTT  1047
      | |||||||||| ||  ||||||||||  | | |||||   || |||| |
seq2  C-GTGATCTTCC-GAATAAGGAAAGTT--CCGGATCTA--CTTTGATG-T  1039

seq1  GTGAATGCCTATGCAGAACATGGAAACAATGTCCTAACTT  1087
      ||||| | ||||||||||||||||||||| ||||||||||
seq2  GTGAA-GGCTATGCAGAACATGGAAACAA-GTCCTAACTT  1077

seq1: chr18_51945594_51946563
seq2: B6Ng01-053K14.g_69_1033 (reverse)

seq1  AATATTAGGGCCATTCTTCTTTAGGTAGATTCTAGCAAATTAATTAATCT  50
      ||||||  |||||||| || ||||| |||||||||| |||||||| ||||
seq2  AATATTTAGGCCATTC-TCCTTAGGAAGATTCTAGCCAATTAATT-ATCT  48

seq1  CTTTCAAAAATCACTTTAGAGACATTCAGAATACTTTTCAAATATCTGGC  100
      | |||||||||||||||| ||||||||||||||||||||||| |||||||
seq2  C-TTCAAAAATCACTTTA-AGACATTCAGAATACTTTTCAAA-ATCTGGC  95

seq1  CA-CCATGGGTCACCCATATAGACAAT-AAAAAAATTCCATAATAGTAAA  148
      || ||||||||||||||  |||||||| |||||||||||||||||| |||
seq2  CACCCATGGGTCACCCAATTAGACAATAAAAAAAATTCCATAATAG-AAA  144

seq1  CAAGATGTGGAGATGCTCTTTCAAGTATCTCTTTAGACTGCTCCATGTAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGTGGAGATGCTCTTTCAAGTATCTCTTTAGACTGCTCCATGTAG  194

seq1  AAACTCTATTTTGTTCAACCCTCTCTATTGCTCACATCCTTTGTAGCTGG  248
      |||||||| |||||||||||||||||||||||||||||||||||| ||||
seq2  AAACTCTA-TTTGTTCAACCCTCTCTATTGCTCACATCCTTTGTA-CTGG  242

seq1  GTCAATTGAAACCACACTCCTACGCTATCCCTTTTTCACCAACGTTTATG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATTGAAACCACACTCCTACGCTATCCCTTTTTCACCAACGTTTATG  292

seq1  TCCTTTACAAAGAAAGACTTGTTCATCTAAATAAGATTTATATTCTCCTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTACAAAGAAAGACTTGTTCATCTAAATAAGATTTATATTCTCCTG  342

seq1  AGGGATAATTTTGATGATATAAAAAGTAAGGCAAAACATTTTAAATTTTA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATAATTTTGATGATATAAAAAGTAAGGCAAAACATTTTAAATTTTA  392

seq1  TATACATAATCCTACATATGATATCATAGGAAGTATTTC-AAATATTCTT  447
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TATACATAATCCTACATATGATATCATAGGAAGTATTTCAAAATATTCTT  442

seq1  TCAAAGTGATATTAAGCAAGTAACGATAGATGATTATCTATGTTAAAATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGTGATATTAAGCAAGTAACGATAGATGATTATCTATGTTAAAATT  492

seq1  AATTAAAAATGTATAGAGTATATTTTCCTATATAATAAAACTTTATAGAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAATGTATAGAGTATATTTTCCTATATAATAAAACTTTATAGAG  542

seq1  AGAATCAGATTTTTTTATTAATATCATATAAAGGCTGGTACAGTATACCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAGATTTTTTTATTAATATCATATAAAGGCTGGTACAGTATACCT  592

seq1  GTCTGAACTACCAGCTGTATTTAGGGCATGGAATAAACATCTAACATTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAACTACCAGCTGTATTTAGGGCATGGAATAAACATCTAACATTTT  642

seq1  AAATGACTAGTAAAATTTCAAATATTATGGTTTCCAAGAAACTTCATGCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACTAGTAAAATTTCAAATATTATGGTTTCCAAGAAACTTCATGCT  692

seq1  TCAGGAGTTCTAAGGCCTAAAATATTAAGCCCTGAAAATGCTTTATGTAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGTTCTAAGGCCTAAAATATTAAGCCCTGAAAATGCTTTATGTAC  742

seq1  AGAGGCATTTCACACTTAAGATCTACAAGTGTTCAGTAATGTCAGGTTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCATTTCACACTTAAGATCTACAAGTGTTCAGTAATGTCAGGTTTA  792

seq1  ATGTTTTAGAAAAATGCCGGGGAGCAAATAAAACTCGCCATTTGCAAAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTAGAAAAATGCCGGGGAGCAAATAAAACTCGCCATTTGCAAAAT  842

seq1  CAGAGAGTAAATACGGCTGAGAAAGGGTAAGGGGGCTGCTTGAGCCCTTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGTAAATACGGCTGAGAAAGGGTAAGGGGGCTGCTTGAGCCCTTC  892

seq1  AGTTCATGACAGATTCCATCCGATTTGTTCCCTTAAAATCCTAGGATTCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATGACAGATTCCATCCGATTTGTTCCCTTAAAATCCTAGGATTCT  942

seq1  TTTTTTTTTTTTCCATTGAATTC  970
      |||||||||||||||||||||||
seq2  TTTTTTTTTTTTCCATTGAATTC  965