BAC Information

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BAC

Clone NameB6Ng01-053O14
Chromosome18 (Build37)
Map Location 81,084,663 - 81,127,491
singlet/doubletdoublet
Overlap geneAtp9b
Upstream geneLOC433204, LOC545267, LOC100040632, LOC620963, LOC100040604, LOC620692, LOC100040593, LOC639825, Pard6g, Zfp508, LOC665009, LOC100039311, 1110032A13Rik, Txnl4, 1810005K13Rik, Pqlc1, Kcng2, D330025C20Rik, Ctdp1, LOC669389, LOC100039336, A430076E10Rik, LOC100039348, Nfatc1
Downstream geneSall3, LOC665124, LOC100039458, LOC100040871
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-053O14.bB6Ng01-053O14.g
ACCDH876818DH876819
length966538
definitionDH876818|Mus musculus domesticus DNA, BAC clone: B6Ng01-053O14, 5' end.DH876819|Mus musculus domesticus DNA, BAC clone: B6Ng01-053O14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,126,948 - 81,127,491)(81,084,663 - 81,085,206)
sequence
gaattcttttgtgattgggctacctcactaaggatgataatcctccagat
acatccatttgcctaagaatttcataaattctgtatccattcctctgttg
agggacatctgggttctttccagcttctggctattataaataaggctact
atgaacatagtggagcatgtgtccttattaccagttggaacatcttctgg
gtatatgcccaggagaggtattgctggatcttctagtaatactatgtcca
attttctgaagaactgccagactgactgagtggttgtacaagcttgcaat
cccaccagcaatgtatgagtgttcttctttctccacatcctcgccagcat
ctgctgtcacttgaatttttgatctcagccattctgactggtgtgaggtg
gaatctcagggttgttttgatttgcatttccctgatgattaagtatgttg
aacattttttcaggtgcttctcagccattccgtattcctcagttgaaaat
tctttgtttagctctgtaccccattttttaatgtggttatttgaatttct
ggagtccagcttcttgagttctttgtatatagaacaatttttttaaaaag
atagtttcactttgtagctcaggctagccaggaactcaatacatagccca
gactagtctttagcactcacagtcctatttttgactcatgtatagtggtt
ttcagtgcatttctatgtatagctattacttaggatagctctgggcattg
ttatagtgtatatatgtataatgcatcccagtatactgttacagtgtata
tatgtatatatgttatagtgtatatatgtataatgcatcccagtatactg
tggatattttaagggtaagatttgcttctttatgttcttttatccatttt
cggtaatagacttgtaatgttatatgtaagtttcacatttaaaaggaata
taatggttcatttatg
caatttgataattacaaactacacacagctggccaatctcatttacccta
accaatccttggtgtcttttatttctctgattgtgggatgatatattatt
cttggtgacctgattataactagataagaaatcattagttccggaagtcc
agaattcttcccactagctttactagaggcagcacttctgacatatgggc
taggtcactaacagctgcccaggttaatttctggagcctcaagactgttt
ttttgttaaaccatttgactttgagctacagagatctctgatgaatgccc
ttttaatatagaggacccaaaacaacaccgtagaccacactaataccact
taaagtgtactttaagtacccttctttatttcataaataccatttaattc
aattctctgagaggcttccccttgcatgcttcatcaccttaagtaaacta
taatttgaagaagcagggtggaagaaagagagaggaggaaggaaggaagg
aggggacgggaaggaagacagggagagagggtggaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_81126948_81127491
seq2: B6Ng01-053O14.b_471_1012 (reverse)

seq1  CATAAATGAAACATTTATATACTTTTAAAATGTGAAACTTACATATAACA  50
      |||||||||| || |||||| | ||| |||||||||||||||||||||||
seq2  CATAAATGAACCA-TTATATTCCTTTTAAATGTGAAACTTACATATAACA  49

seq1  TTACAAGTCTATTACCCGAAAATGGATAAAAGAACATAAAGAGGCAAATC  100
      |||||||||||||| ||||||||||||||||||||||||||| |||||||
seq2  TTACAAGTCTATTA-CCGAAAATGGATAAAAGAACATAAAGAAGCAAATC  98

seq1  TTACCCTTAAAATATCAACAGTATACTGGGATGCATTATACATATATACA  150
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTACCCTTAAAATATCCACAGTATACTGGGATGCATTATACATATATACA  148

seq1  CTATAACATATATACATATATACACTGTAACAGTATACTGGGATGCATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAACATATATACATATATACACTGTAACAGTATACTGGGATGCATTA  198

seq1  TACATATATACACTATAACAATGCCCAGAGCTATCCTAAGTAATAGCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATATACACTATAACAATGCCCAGAGCTATCCTAAGTAATAGCTAT  248

seq1  ACATAGAAATGCACTGAAAACCACTATACATGAGTCAAAAATAGGACTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAAATGCACTGAAAACCACTATACATGAGTCAAAAATAGGACTGT  298

seq1  GAGTGCTAAAGACTAGTCTGGGCTATGTATTGAGTTCCTGGCTAGCCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTAAAGACTAGTCTGGGCTATGTATTGAGTTCCTGGCTAGCCTGA  348

seq1  GCTACAAAGTGAAACTATCTTTTTAAAAAAATTGTTCTATATACAAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAAAGTGAAACTATCTTTTTAAAAAAATTGTTCTATATACAAAGAA  398

seq1  CTCAAGAAGCTGGACTCCAGAAATTCAAATAACCACATTAAAAAATGGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAAGCTGGACTCCAGAAATTCAAATAACCACATTAAAAAATGGGG  448

seq1  TACAGAGCTAAACAAAGAATTTTCAACTGAGGAATACGGAATGGCTGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGCTAAACAAAGAATTTTCAACTGAGGAATACGGAATGGCTGAGA  498

seq1  AGCACCTGAAAAAATGTTCAACATACTTAATCATCAGGGAAATG  544
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTGAAAAAATGTTCAACATACTTAATCATCAGGGAAATG  542

seq1: chr18_81084663_81085206
seq2: B6Ng01-053O14.g_71_614

seq1  GAATTCCAATTTGATAATTACAAACTACACACAGCTGGCCAATCTCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATTTGATAATTACAAACTACACACAGCTGGCCAATCTCATTT  50

seq1  ACCCTAACCAATCCTTGGTGTCTTTTATTTCTCTGATTGTGGGATGATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAACCAATCCTTGGTGTCTTTTATTTCTCTGATTGTGGGATGATAT  100

seq1  ATTATTCTTGGTGACCTGATTATAACTAGATAAGAAATCATTAGTTCCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTTGGTGACCTGATTATAACTAGATAAGAAATCATTAGTTCCGG  150

seq1  AAGTCCAGAATTCTTCCCACTAGCTTTACTAGAGGCAGCACTTCTGACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCAGAATTCTTCCCACTAGCTTTACTAGAGGCAGCACTTCTGACAT  200

seq1  ATGGGCTAGGTCACTAACAGCTGCCCAGGTTAATTTCTGGAGCCTCAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTAGGTCACTAACAGCTGCCCAGGTTAATTTCTGGAGCCTCAAGA  250

seq1  CTGTTTTTTTGTTAAACCATTTGACTTTGAGCTACAGAGATCTCTGATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTTTGTTAAACCATTTGACTTTGAGCTACAGAGATCTCTGATGA  300

seq1  ATGCCCTTTTAATATAGAGGACCCAAAACAACACCGTAGACCACACTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTTTTAATATAGAGGACCCAAAACAACACCGTAGACCACACTAAT  350

seq1  ACCACTTAAAGTGTACTTTAAGTACCCTTCTTTATTTCATAAATACCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTTAAAGTGTACTTTAAGTACCCTTCTTTATTTCATAAATACCATT  400

seq1  TAATTCAATTCTCTGAGAGGCTTCCCCTTGCATGCTTCATCACCTTAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCAATTCTCTGAGAGGCTTCCCCTTGCATGCTTCATCACCTTAAGT  450

seq1  AAACTATAATTTGAAGAAGCAGGGTGGAAGAAAGAGAGAGGAGGAAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATAATTTGAAGAAGCAGGGTGGAAGAAAGAGAGAGGAGGAAGGAA  500

seq1  GGAAGGAGGGGACGGGAAGGAAGACAGGGAGAGAGGGTGGAAGA  544
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGGGGACGGGAAGGAAGACAGGGAGAGAGGGTGGAAGA  544