BAC Information

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BAC

Clone NameB6Ng01-054O07
Chromosome18 (Build37)
Map Location 4,164,756 - 4,165,358
singlet/doubletsinglet
Overlap genenone
Upstream geneCrem, EG621440, Cul2, EG621501, Bambi, LOC100039273, LOC435549, EG664867, LOC621666
Downstream geneLyzl1, LOC383374, LOC664909, Map3k8, Papd1, EG664931, LOC100039354, LOC433157, 9430020K01Rik, LOC268988, Svil
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054O07.b
ACCDH877511
length815
definitionDH877511|Mus musculus domesticus DNA, BAC clone: B6Ng01-054O07, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtggaattaatagcatccaagacacaggaatacaatttacaaa
agttcaaaaaagtcccaggctgaataaaatacttgtcacacagttagcat
ctgtagtagtttgaatatgcttggtccaggcagtggccttgttggcacat
gtgtgaccttgttggaggaagtgagtcattgtgggagtggtctttgagag
tcttgctagctgtgtagaagacagtcttttagctgcattcagatcaagat
gtaaaactctcagctgcttctccagcaccatgtctgctagcatgctgcca
tgcttccttcttttttaaatttttttcaattttttattagatattttctt
tatttacatttcaaatgctatcctgaaagtcccctatacccttccccctg
ccctgctcgcctacccacccactcccaattcttggccttggtcttcccct
gtactggggcatataaagtttgcaagaccaaggggcctctcttcccaatg
atggctgactaggccatcctctgctacatatgcagctagagacacgagct
cagggggtactggttagttcatattgctgttcctcctataggattgcaga
ccacttcagctccttgggtactttgtctagctcctccatttggggccttg
tgttccattcaataggtgtctgtgagcatccacttctgtatttgccaagc
actggcatagcctcacaagagacagatatatcagggtcctgtcaacaaaa
tcttgcaatgtctgtgtttggtggctgattttgggatggatcccccgtgg
ggcagtctctggatg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_4164756_4165358
seq2: B6Ng01-054O07.b_42_642 (reverse)

seq1  GTCTGCAATCCTATAGGAGGAACAGCAATATGAACTAACCAGTACCCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCAATCCTATAGGAGGAACAGCAATATGAACTAACCAGTACCCCCT  50

seq1  GAGCTCGTGTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTCAGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCGTGTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTCAGCCA  100

seq1  TCATTGGGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGGAAGAGAGGCCCCTTGGTCTTGCAAACTTTATATGCCCCAGTA  150

seq1  CAGGGGAAGACCAAGGCCAAGAATTGGGAGTGGGTGGGTAGGCGAGCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAAGACCAAGGCCAAGAATTGGGAGTGGGTGGGTAGGCGAGCAGG  200

seq1  GCAGGGGGAAGGGTATAGGGGACTTTCAGGATAGCATTTGAAATGTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGGGAAGGGTATAGGGGACTTTCAGGATAGCATTTGAAATGTAAAT  250

seq1  AAAGAAAATATCTAATAAAAAATTGAAAAAAATTTAAAAAAGAAGGAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATATCTAATAAAAAATTGAAAAAAATTTAAAAAAGAAGGAAGC  300

seq1  ATGGCAGCATGCTAGCAGACATGGTGCTGGAGAAGCAGCTGAGAGTTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATGGCAGCATGCTAGCAGACATGGTGCTGGAGAAGCAGCTGAGAGTTTTA  350

seq1  CATCTTGATCTGAATGCAGCTAAAAGACTGTCTTCTACACAGCTAGCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGATCTGAATGCAGCTAAAAGACTGTCTTCTACACAGCTAGCAAG  400

seq1  ACTCTCAAAGACCACTCCCACAATGACTCACTTCCTCCAACAAGGTCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCAAAGACCACTCCCACAATGACTCACTTCCTCCAACAAGGTCACA  450

seq1  CATGTGCCAACAAGGCCACTGCCTGGACCAAGCATATTCAAACTACTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCCAACAAGGCCACTGCCTGGACCAAGCATATTCAAACTACTACA  500

seq1  GATGCTAACTGTGTGACAAGTATTTTATTCAGCCTGGGACTTTTTTGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTAACTGTGTGACAAGTATTTTATTCAGCCTGGGACTTTTTTGAAC  550

seq1  TTTTGTAAATTGTATTCCTGTCTCTTGGATGCTATTAATTTCTACTTGAA  600
      ||||||||||||||||||||| |||||||||||||||| ||| || ||||
seq2  TTTTGTAAATTGTATTCCTGTGTCTTGGATGCTATTAA-TTCCAC-TGAA  598

seq1  TTC  603
      |||
seq2  TTC  601