BAC Information

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BAC

Clone NameB6Ng01-057F08
Chromosome18 (Build37)
Map Location 14,941,361 - 15,081,301
singlet/doubletdoublet
Overlap geneTaf4b, LOC669965
Upstream geneZfp521, LOC100040094, LOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8
Downstream geneKctd1, EG622268, LOC100040151, Aqp4, LOC665473, Chst9, LOC670012, LOC100040551
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057F08.bB6Ng01-057F08.g
ACCDH879234DH879235
length1,124925
definitionDH879234|Mus musculus domesticus DNA, BAC clone: B6Ng01-057F08, 5' end.DH879235|Mus musculus domesticus DNA, BAC clone: B6Ng01-057F08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,080,155 - 15,081,301)(14,941,361 - 14,942,290)
sequence
gaattcttagatgaggttatgaaaaagtatggaagtctggtcccactcag
taaaaaaagatgcccttgggagatcaaaagaagtctttagaagacttttc
taatagcaaaccatttatcaataaggaaataacaaactactgcgccagac
atcaaaagtgtaacttctgaatcttctacaataagcacatgctggatatg
ggcaatctgacaactctggatggtcagaattggttgaatgaccaggttat
taatatgtacggtgagcttataatggatgcagtcccagacaaagttcact
tcatcaacagctctttctatagacagctggtaaccaaaggctataacagt
tcagagatggactaagaaggtggacttgtttaaaaagactcttctgttga
ttcccatccacctggaggcccactggtctctcattccagctggattattt
cattttatgattcccaaggcattcattttaaagtctgtatagagaataca
agaaagtatttgctgactggagccagaggaaaaaaatagacctgaatttc
ttcagatttggcaaactgctgttacaaagtatattccacaacagaaaaat
gaaagtgactgtggagtctttgtgctcctgtactgcaagtgcctcacctg
agagcagcctttccagctttctcaagaagacatgcctcgtgtgcggaaga
ggatctataagggagctgtgtgagtgccggctcctggacggagactcact
cagcagcgactccagaaagctccatgatggagcagatggttgggtacttg
aatctccaaacacttactgaatctttacagatatttcagactggtgggat
tgggccacttactgttacctcagatttaattttgcccttcatttctcctg
ctatcatgtacctttttaatgttcaatttagtttcatttttaactttatg
gattccatacgtcctcccatgttaatattatatccaaatgcatgcaaata
gacagagaatgctgtaagagtatttaaaatgcctagtagatttggtgcag
ctttgaacatagtagatgtgactgaaacagtttaagtaaccgaatcagat
gtttttgaacagctagctcgaata
gaattccaccttgtcaagagtcagttctccgcacttttttcttaatgtat
aacatcctaggagaggcgagtggaggcgttctgaggcgcttaggccgggg
caagccagcggagcaagcaagcaagcaagcaaggcgcgccctgtcgcagg
tcgcccggtgctgctagccgctcgcacgtgataactttccgggaacctgc
gcctctgagcttcagattctgctgaagactcggagctactccggagccgc
ccagcgtgacgtcactagcgcgattcctctcgctggccaatcagaaggtc
gaacttcagggaagccccgggcggcgggggctgccagggcgcgtgcgcaa
gggctccgcgtggctatataaacatggctggctgagccgcgccggggttt
gtgcggagcgcgtgtgggtcgcctgcggactctgcgggtctgtaggattt
tgaatttctggcgcggaagctccgagttaaagctccccgggtgggaactg
aagtgacgccctgagggagctgccggtccgggcgcttctgccgcgggacc
cgggctgagcgcgcacgtgtgagcgccgctgagggagtgcccggcggtgt
cgccgccagccgggcccggagcgcgcgtgtgctccgcgatgctgcggcgc
ccggactgcacccgagtctcctgccgctcgccccggctcgcctcgcttca
gttccgggaagggcagcgtcgctgccgctgagcctccgagggcatgccgg
cgggcctcacggagccggccggcgccgctgctcctgtagtctcgagcgcg
tcggggccgtgaccatggctccggtcgccgcgctgcccgtccgggtggag
ggcaccccggtgccctgggccctgtgactaagcttcctgtcattgttgcg
tgtagtctgtgggccccatccttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_15080155_15081301
seq2: B6Ng01-057F08.b_48_1171 (reverse)

seq1  TATTCCGAGCTATGCTGTATCAAAAACATCTTGATTCTGGGGTTAACTCT  50
      |||| ||||||| ||||| ||||||||||| ||||||   |||||   ||
seq2  TATT-CGAGCTA-GCTGT-TCAAAAACATC-TGATTC---GGTTA---CT  40

seq1  TAAACCTGTTTTCAGTTCACATCTAACTATGTTTCAAAAGCTGCACCAAA  100
      |||| ||| |||||| |||||||| ||||||||   ||||||||||||||
seq2  TAAA-CTG-TTTCAG-TCACATCT-ACTATGTT--CAAAGCTGCACCAAA  84

seq1  TCTACTAGGCATTTTTTAAAATACTCTTTACAGCATTCTCTGTCTATATG  150
      |||||||||||||||   |||||||| |||||||||||||||||||| ||
seq2  TCTACTAGGCATTTT---AAATACTC-TTACAGCATTCTCTGTCTATTTG  130

seq1  CATGCATTTGGATAATAAATATTAAACATGGGAGGGACGTATGGAATCCA  200
      ||||||||||||||   |||||| ||||||||| ||||||||||||||||
seq2  CATGCATTTGGATA--TAATATT-AACATGGGA-GGACGTATGGAATCCA  176

seq1  TAAAGTTAAAAATGAAACTAAATTGAACATTAAAAAGGTACATGATAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTTAAAAATGAAACTAAATTGAACATTAAAAAGGTACATGATAGCA  226

seq1  GGAGAAATGAAGGGCAAAATTAAATCTGAGGTAACAGTAAGTGGCCCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAATGAAGGGCAAAATTAAATCTGAGGTAACAGTAAGTGGCCCAAT  276

seq1  CCCACCAGTCTGAAATATCTGTAAAGATTCAGTAAGTGTTTGGAGATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCAGTCTGAAATATCTGTAAAGATTCAGTAAGTGTTTGGAGATTCA  326

seq1  AGTACCCAACCATCTGCTCCATCATGGAGCCTTCTGGAGTCGCTGCTGAG  400
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGTACCCAACCATCTGCTCCATCATGGAGCTTTCTGGAGTCGCTGCTGAG  376

seq1  TGAGTCTCCGTCCAGGAGCCGGCACTCACACAGCT-CCTTATAGATCCTC  449
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TGAGTCTCCGTCCAGGAGCCGGCACTCACACAGCTCCCTTATAGATCCTC  426

seq1  TTCCGCACACGAGGCATGTCTTCTTGAGAAAGCTGGAAAGGCTGCTCTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGCACACGAGGCATGTCTTCTTGAGAAAGCTGGAAAGGCTGCTCTCA  476

seq1  GGTGAGGCACTTGCAGTACAGGAGCACAAAGACTCCACAGTCACTTTCAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGCACTTGCAGTACAGGAGCACAAAGACTCCACAGTCACTTTCAT  526

seq1  TTTTCTGTTGTGGAATATACTTTGTAACAGCAGTTTGCCAAATCTGAAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTTGTGGAATATACTTTGTAACAGCAGTTTGCCAAATCTGAAGA  576

seq1  AATTCAGGTCTATTTTTTTCCTCTGGCTCCAGTCAGCAAATACTTTCTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGGTCTATTTTTTTCCTCTGGCTCCAGTCAGCAAATACTTTCTTG  626

seq1  TATTCTCTATACAGACTTTAAAATGAATGCCTTGGGAATCATAAAATGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTCTATACAGACTTTAAAATGAATGCCTTGGGAATCATAAAATGAA  676

seq1  ATAATCCAGCTGGAATGAGAGACCAGTGGGCCTCCAGGTGGATGGGAATC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCAGCTGGAATGAGAGACCAGTGGGCCTCCAGGTGGATGGGAATC  726

seq1  AACAGAAGAGTCTTTTTAAACAAGTCCACCTTCTTAGTCCATCTCTGAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAGAGTCTTTTTAAACAAGTCCACCTTCTTAGTCCATCTCTGAAC  776

seq1  TGTTATAGCCTTTGGTTACCAGCTGTCTATAGAAAGAGCTGTTGATGAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAGCCTTTGGTTACCAGCTGTCTATAGAAAGAGCTGTTGATGAAG  826

seq1  TGAACTTTGTCTGGGACTGCATCCATTATAAGCTCACCGTACATATTAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTTGTCTGGGACTGCATCCATTATAAGCTCACCGTACATATTAAT  876

seq1  AACCTGGTCATTCAACCAATTCTGACCATCCAGAGTTGTCAGATTGCCCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGTCATTCAACCAATTCTGACCATCCAGAGTTGTCAGATTGCCCA  926

seq1  TATCCAGCATGTGCTTATTGTAGAAGATTCAGAAGTTACACTTTTGATGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGCATGTGCTTATTGTAGAAGATTCAGAAGTTACACTTTTGATGT  976

seq1  CTGGCGCAGTAGTTTGTTATTTCCTTATTGATAAATGGTTTGCTATTAGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGCAGTAGTTTGTTATTTCCTTATTGATAAATGGTTTGCTATTAGA  1026

seq1  AAAGTCTTCTAAAGACTTCTTTTGATCTCCCAAGGGCATCTTTTTTTACT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTTCTAAAGACTTCTTTTGATCTCCCAAGGGCATCTTTTTTTACT  1076

seq1  GAGTGGGACCAGACTTCCATACTTTTTCATAACCTCATCTAAGAATTC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGACCAGACTTCCATACTTTTTCATAACCTCATCTAAGAATTC  1124

seq1: chr18_14941361_14942290
seq2: B6Ng01-057F08.g_73_997

seq1  GAATTCCACCTTGTCAAGAGTCAGTTCTCCGCACTTTTTTCTTAATGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTTGTCAAGAGTCAGTTCTCCGCACTTTTTTCTTAATGTAT  50

seq1  AACATCCTAGGAGAGGCGAGTGGAGGCGTTCTGAGGCGCTTAGGCCGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCTAGGAGAGGCGAGTGGAGGCGTTCTGAGGCGCTTAGGCCGGGG  100

seq1  CAAGCCAGCGGAGCAAGCAAGCAAGCAAGCAAGGCGCGCCCTGTCGCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCAGCGGAGCAAGCAAGCAAGCAAGCAAGGCGCGCCCTGTCGCAGG  150

seq1  TCGCCCGGTGCTGCTAGCCGCTCGCACGTGATAACTTTCCGGGAACCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCCGGTGCTGCTAGCCGCTCGCACGTGATAACTTTCCGGGAACCTGC  200

seq1  GCCTCTGAGCTTCAGATTCTGCTGAAGACTCGGAGCTACTCCGGAGCCGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGAGCTTCAGATTCTGCTGAAGACTCGGAGCTACTCCGGAGCCGC  250

seq1  CCAGCGTGACGTCACTAGCGCGATTCCTCTCGCTGGCCAATCAGAAGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCGTGACGTCACTAGCGCGATTCCTCTCGCTGGCCAATCAGAAGGTC  300

seq1  GAACTTCAGGGAAGCCCCGGGCGGCGGGGGCTGCCAGGGCGCGTGCGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCAGGGAAGCCCCGGGCGGCGGGGGCTGCCAGGGCGCGTGCGCAA  350

seq1  GGGCTCCGCGTGGCTATATAAACATGGCTGGCTGAGCCGCGCCGGGGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTCCGCGTGGCTATATAAACATGGCTGGCTGAGCCGCGCCGGGGTTT  400

seq1  GTGCGGAGCGCGTGTGGGTCGCCTGCGGACTCTGCGGGTCTGTAGGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGGAGCGCGTGTGGGTCGCCTGCGGACTCTGCGGGTCTGTAGGATTT  450

seq1  TGAATTTCTGGCGCGGAAGCTCCGAGTTAAAGCTCCCCGGGTGGGAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTCTGGCGCGGAAGCTCCGAGTTAAAGCTCCCCGGGTGGGAACTG  500

seq1  AAGTGACGCCCTGAGGGAGCTGCCGGTCCGGGCGCTTCTGCCGCGGGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGACGCCCTGAGGGAGCTGCCGGTCCGGGCGCTTCTGCCGCGGGACC  550

seq1  CGGGCTGAGCGCGCACGTGTGAGCGCCGCTGAGGGAGTGCCCGGCGGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCTGAGCGCGCACGTGTGAGCGCCGCTGAGGGAGTGCCCGGCGGTGT  600

seq1  CGCCGCCAGCCGGGCCCGGAGCGCGCGTGTGCTCCGCGATGCTGCGGCGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCGCCAGCCGGGCCCGGAGCGCGCGTGTGCTCCGCGATGCTGCGGCGC  650

seq1  CCGGACTGCACCCGAGTCTCCTGCCGCTCGCCCCGGCTCGCCTCGCTTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGACTGCACCCGAGTCTCCTGCCGCTCGCCCCGGCTCGCCTCGCTTCA  700

seq1  GTTCCGGGAAGGGCAGCGTCGCTGCCGCTGAGCCTCCGAGGGCATGCCGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCGGGAAGGGCAGCGTCGCTGCCGCTGAGCCTCCGAGGGCATGCCGG  750

seq1  CGGGCCTCACGGAGCCGGCCGGCGCCGCTGCTCCTGTAGTCTCGAGCGCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCCTCACGGAGCCGGCCGGCGCCGCTGCTCCTGTAGTCTCGAGCGCG  800

seq1  TCGGGGGCCGTGACCATGGCTCCGGTCGCCGCGCTGCCCGTCCGGGTGGA  850
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TC-GGGGCCGTGACCATGGCTCCGGTCGCCGCGCTGCCCGTCCGGGTGGA  849

seq1  GGGCACCCCGGTGGCCCTGGGCCCTGTGACTAAGGCTCCTGTCAGTGTTT  900
      |||||||||||| |||||||||||||||||||||  |||||||| || ||
seq2  GGGCACCCCGGT-GCCCTGGGCCCTGTGACTAAGCTTCCTGTCATTG-TT  897

seq1  GCGTGGAGTCTGTGGCGCCCCAGCCCTTGC  930
      ||||| ||||||||| ||||||  ||||||
seq2  GCGTGTAGTCTGTGG-GCCCCA-TCCTTGC  925