BAC Information

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BAC

Clone NameB6Ng01-057N23
Chromosome18 (Build37)
Map Location 22,180,886 - 22,289,298
singlet/doubletdoublet
Overlap gene4921528I01Rik
Upstream geneRnf138, Mep1b, EG622978, Gm944, LOC665722, LOC225264, Klhl14
Downstream geneLOC546708, LOC100040547, Asxl3, Nol4, LOC100040579
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057N23.bB6Ng01-057N23.g
ACCDH879604DH879605
length1,0991,067
definitionDH879604|Mus musculus domesticus DNA, BAC clone: B6Ng01-057N23, 5' end.DH879605|Mus musculus domesticus DNA, BAC clone: B6Ng01-057N23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,180,886 - 22,181,988)(22,288,227 - 22,289,298)
sequence
gaattcattgcccttaccacaccccccagctctctgaaagataaatgata
gcatgtacacatattttttatgattttttccctttgggaagggccagtaa
tatcagttactgacagaaacttgtagttttgaaaatattttatccatatt
tgctttatttttcactctagctgtcttaactattctatgcaccaaaaact
tacttgtaaaatgtcatgatacctcatgttttatattcaagtcaacataa
tcctttagcatctcattaagaagcagtggagtttgaatcaagtgctggca
atctcattaggccagtcactgctcactcagttttaaaatgctatactcag
tttggcccaagtatagtgtaggatagattatagacttgtggacaatgaac
agtgccttgccagacagttcttaaacgaattcataatggtgtgatcatga
aaaagtaacttggatggtttgtgattttcctatacaaaaccataatttta
tctatatctatatctatgtatcttcacttattacttagtaaccaaggtat
ccccaaaagtagatgactagttatgaataatttttatttaatgagttgct
gtaaaagcttaccttagagtgctgtctgtgaaggtacctgattctcacag
cctcggcttctaactctttcagttgctcctctacttctaacaaagccata
ttatagagtacttgtcttcgtataaactcctgcatctcaataaactgagt
ttcttcaatggcatacagccttttctgccaaccaagattgcagactactc
attcattcattgttaattacacacaagtttattccatgctatcatttgaa
aatcaaatactacagcctccaatagaaaagtaacaggttagattatggta
ttttaaacagcacatagctgtgaagacatgagaaggaaaaaacggacaag
aagggccaaatattctcaaacatctcattctgttaaggaccagtaagtgc
cagggcctgctgacaacaaaaactggaaaatctaaagtgaccaacggagc
tggcagtatagggaaatattaggtgaaaatgactacctggttatgaaaa
gaattctagaaatgggcagatgtgaaggttaggagaaggctcataatgac
tggtgatgcctctgtcctgctcttctggttaaatggtgtttactccatgg
gtggaaaccttagacagagacagtgttctaatcagccaagataaatatga
gagttccgaaaaacagagccagtttgcttagttgggcagaacttttcttt
cttctttttctaacaaaaatgttaataaaataggaaatagctataatatt
gtagaaataaatcctttgttgtgaacaatagacttacatgaaaatagatt
gaaccttttaatgaaaagataaattataaattatgttgtatcataaaatt
tctaggaaataagaatttgtaaataaaaatactgttataatgttctctca
agatagttcaagacatgtaattgttttaagtttctattaatttgagtata
aatactactgggtaatataattttcttctatcagtgcactcttcagtaag
gtgaccacgtaaatgacatttgatattccacagaaatactttatcaattt
ttgtataactaatttttaatgtatctatcttttacaaattaatgtcatct
tctttttttctgtatgtgtaggacttctgtcacaaaagataaagaggcag
gtttggacgtctctgctccagagaaacaagtccacccagaaaaaggaaag
ggtaaatttgcttttgatacttagagatgtataattgtttagaggtcatt
gattttttaatatatttctgatattggcaattattattcttatgagtttt
ctggatattgaatagagaagagcccactatacctctctgggtagcatgtc
ctcagctaacacatattattaatgacttctgcaccagacattggactaaa
ttttgggtatacagtgatacctacccagagctcatacagttgagattgac
tgataaacctttctatgatgatcaaggtattgtctgtctgctgtctgtcg
tctcctcagtggagcagctatcttccacggggactacttgaccgttggca
tgtggtcaaaagactaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22180886_22181988
seq2: B6Ng01-057N23.b_45_1143

seq1  GAATTCATTGCCCTTACCACACCCCCCAGCTCTCTGAAAGATAAATGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCCCTTACCACACCCCCCAGCTCTCTGAAAGATAAATGATA  50

seq1  GCATGTACACATATTTTTTATGATTTTTTCCCTTTGGGAAGGGCCAGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTACACATATTTTTTATGATTTTTTCCCTTTGGGAAGGGCCAGTAA  100

seq1  TATCAGTTACTGACAGAAACTTGTAGTTTTGAAAATATTTTATCCATATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTTACTGACAGAAACTTGTAGTTTTGAAAATATTTTATCCATATT  150

seq1  TGCTTTATTTTTCACTCTAGCTGTCTTAACTATTCTATGCACCAAAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTATTTTTCACTCTAGCTGTCTTAACTATTCTATGCACCAAAAACT  200

seq1  TACTTGTAAAATGTCATGATACCTCATGTTTTATATTCAAGTCAACATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTAAAATGTCATGATACCTCATGTTTTATATTCAAGTCAACATAA  250

seq1  TCCTTTAGCATCTCATTAAGAAGCAGTGGAGTTTGAATCAAGTGCTGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAGCATCTCATTAAGAAGCAGTGGAGTTTGAATCAAGTGCTGGCA  300

seq1  ATCTCATTAGGCCAGTCACTGCTCACTCAGTTTTAAAATGCTATACTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATTAGGCCAGTCACTGCTCACTCAGTTTTAAAATGCTATACTCAG  350

seq1  TTTGGCCCAAGTATAGTGTAGGATAGATTATAGACTTGTGGACAATGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCCCAAGTATAGTGTAGGATAGATTATAGACTTGTGGACAATGAAC  400

seq1  AGTGCCTTGCCAGACAGTTCTTAAACGAATTCATAATGGTGTGATCATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTTGCCAGACAGTTCTTAAACGAATTCATAATGGTGTGATCATGA  450

seq1  AAAAGTAACTTGGATGGTTTGTGATTTTCCTATACAAAACCATAATTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAACTTGGATGGTTTGTGATTTTCCTATACAAAACCATAATTTTA  500

seq1  TCTATATCTATATCTATGTATCTTCACTTATTACTTAGTAACCAAGGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATCTATATCTATGTATCTTCACTTATTACTTAGTAACCAAGGTAT  550

seq1  CCCCAAAAGTAGATGACTAGTTATGAATAATTTTTATTTAATGAGTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAAGTAGATGACTAGTTATGAATAATTTTTATTTAATGAGTTGCT  600

seq1  GTAAAAGCTTACCTTAGAGTGCTGTCTGTGAAGGTACCTGATTCTCACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGCTTACCTTAGAGTGCTGTCTGTGAAGGTACCTGATTCTCACAG  650

seq1  CCTCGGCTTCTAACTCTTTCAGTTGCTCCTCTACTTCTAACAAAGCCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGCTTCTAACTCTTTCAGTTGCTCCTCTACTTCTAACAAAGCCATA  700

seq1  TTATAGAGTACTTGTCTTCGTATAAACTCCTGCATCTCAATAAACTGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGAGTACTTGTCTTCGTATAAACTCCTGCATCTCAATAAACTGAGT  750

seq1  TTCTTCAATGGCATACAGCCTTTTCTGCCAACCAAGATTGCAGACTACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAATGGCATACAGCCTTTTCTGCCAACCAAGATTGCAGACTACTC  800

seq1  ATTCATTCATTGTTAATTACACACAAGTTTATTCCATGCTATCATTTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTCATTGTTAATTACACACAAGTTTATTCCATGCTATCATTTGAA  850

seq1  AATCAAATACTACAGCCTCCAATAGAAAAGTAACAGGTTAGATTATGGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATACTACAGCCTCCAATAGAAAAGTAACAGGTTAGATTATGGTA  900

seq1  TTTTAAACAGCACATAGCTGTGAAGACATGAGAAGGAAAAAAACGGACAA  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTTAAACAGCACATAGCTGTGAAGACATGAGAAGG-AAAAAACGGACAA  949

seq1  GAAGGGCCAAATATTCTCAAACATCCTCATTCTGTTAAGGACCAGTAAGT  1000
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAAGGGCCAAATATTCTCAAACAT-CTCATTCTGTTAAGGACCAGTAAGT  998

seq1  GCCAGTGCCTGCTGACAACACATACTTGAAAATCTAAAGTGACCAAC-GA  1049
      ||||| |||||||||||||| | ||| |||||||||||||||||||| ||
seq2  GCCAGGGCCTGCTGACAACAAAAACTGGAAAATCTAAAGTGACCAACGGA  1048

seq1  GCTGGCAAGTTATAGGAAAATATTAGGTAGAAATGACTTAGCTGGTTATG  1099
      |||||||   |||||| |||||||||||  ||||||| || |||||||||
seq2  GCTGGCA--GTATAGGGAAATATTAGGTGAAAATGAC-TACCTGGTTATG  1095

seq1  AAAA  1103
      ||||
seq2  AAAA  1099

seq1: chr18_22288227_22289298
seq2: B6Ng01-057N23.g_70_1136 (reverse)

seq1  TTAGTCTTATTGACCACATGCCAACTGGTC-AGTAGTTCCCCGTGGATGA  49
      |||||||| |||||||||||||||| |||| ||||| |||||||||| ||
seq2  TTAGTCTT-TTGACCACATGCCAAC-GGTCAAGTAG-TCCCCGTGGAAGA  47

seq1  TAGCTGCTCCACTGGAGAGACAGACAGACAGACAGACAGACAATACCTTG  99
      ||||||||||||||  ||||| ||||||||| ||||||||||||||||||
seq2  TAGCTGCTCCACTGAGGAGAC-GACAGACAG-CAGACAGACAATACCTTG  95

seq1  ATCATCATAGAAAGGTTTATCAGTCATTCTCAACTGTATTGAGCTCTGGG  149
      |||||||||||||||||||||||||| ||||||||||| |||||||||||
seq2  ATCATCATAGAAAGGTTTATCAGTCAATCTCAACTGTA-TGAGCTCTGGG  144

seq1  TAGGTATCACTGTATACCCAAAATTTAGTCCAATGTCTGGTGCAGAAGTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATCACTGTATACCCAAAATTTAGTCCAATGTCTGGTGCAGAAGTC  194

seq1  ATTAATAATATGTGTTAGCTGAGGACATGCTACCCAGAGAGGTATAGTGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAATATGTGTTAGCTGAGGACATGCTACCCAGAGAGGTATAGTGG  244

seq1  GCTCTTCTCTATTCAATATCCAGAAAACTCATAAGAATAATAATTGCCAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCTCTATTCAATATCCAGAAAACTCATAAGAATAATAATTGCCAA  294

seq1  TATCAGAAATATATTAAAAAATCAATGACCTCTAAACAATTATACATCTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGAAATATATTAAAAAATCAATGACCTCTAAACAATTATACATCTC  344

seq1  TAAGTATCAAAAGCAAATTTACCCTTTCCTTTTTCTGGGTGGACTTGTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATCAAAAGCAAATTTACCCTTTCCTTTTTCTGGGTGGACTTGTTT  394

seq1  CTCTGGAGCAGAGACGTCCAAACCTGCCTCTTTATCTTTTGTGACAGAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAGCAGAGACGTCCAAACCTGCCTCTTTATCTTTTGTGACAGAAG  444

seq1  TCCTACACATACAGAAAAAAAGAAGATGACATTAATTTGTAAAAGATAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACACATACAGAAAAAAAGAAGATGACATTAATTTGTAAAAGATAGA  494

seq1  TACATTAAAAATTAGTTATACAAAAATTGATAAAGTATTTCTGTGGAATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTAAAAATTAGTTATACAAAAATTGATAAAGTATTTCTGTGGAATA  544

seq1  TCAAATGTCATTTACGTGGTCACCTTACTGAAGAGTGCACTGATAGAAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGTCATTTACGTGGTCACCTTACTGAAGAGTGCACTGATAGAAGA  594

seq1  AAATTATATTACCCAGTAGTATTTATACTCAAATTAATAGAAACTTAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATATTACCCAGTAGTATTTATACTCAAATTAATAGAAACTTAAAA  644

seq1  CAATTACATGTCTTGAACTATCTTGAGAGAACATTATAACAGTATTTTTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTACATGTCTTGAACTATCTTGAGAGAACATTATAACAGTATTTTTA  694

seq1  TTTACAAATTCTTATTTCCTAGAAATTTTATGATACAACATAATTTATAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAATTCTTATTTCCTAGAAATTTTATGATACAACATAATTTATAA  744

seq1  TTTATCTTTTCATTAAAAGGTTCAATCTATTTTCATGTAAGTCTATTGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTTTCATTAAAAGGTTCAATCTATTTTCATGTAAGTCTATTGTT  794

seq1  CACAACAAAGGATTTATTTCTACAATATTATAGCTATTTCCTATTTTATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACAAAGGATTTATTTCTACAATATTATAGCTATTTCCTATTTTATT  844

seq1  AACATTTTTGTTAGAAAAAGAAGAAAGAAAAGTTCTGCCCAACTAAGCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTTGTTAGAAAAAGAAGAAAGAAAAGTTCTGCCCAACTAAGCAA  894

seq1  ACTGGCTCTGTTTTTCGGAACTCTCATATTTATCTTGGCTGATTAGAACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTCTGTTTTTCGGAACTCTCATATTTATCTTGGCTGATTAGAACA  944

seq1  CTGTCTCTGTCTAAGGTTTCCACCCATGGAGTAAACACCATTTAACCAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTGTCTAAGGTTTCCACCCATGGAGTAAACACCATTTAACCAGA  994

seq1  AGAGCAGGACAGAGGCATCACCAGTCATTATGAGCCTTCTCCTAACCTTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGGACAGAGGCATCACCAGTCATTATGAGCCTTCTCCTAACCTTC  1044

seq1  ACATCTGCCCATTTCTAGAATTC  1072
      |||||||||||||||||||||||
seq2  ACATCTGCCCATTTCTAGAATTC  1067