BAC Information

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BAC

Clone NameB6Ng01-058N15
Chromosome18 (Build37)
Map Location 14,100,962 - 14,216,598
singlet/doubletdoublet
Overlap geneZfp521, LOC100040094
Upstream geneImpact, Hrh4, EG383354, LOC665379, LOC100040358
Downstream geneLOC100040103, LOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8, Taf4b, LOC669965, Kctd1, EG622268
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-058N15.bB6Ng01-058N15.g
ACCDH880314DH880315
length1,1291,090
definitionDH880314|Mus musculus domesticus DNA, BAC clone: B6Ng01-058N15, 5' end.DH880315|Mus musculus domesticus DNA, BAC clone: B6Ng01-058N15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,215,453 - 14,216,598)(14,100,962 - 14,102,076)
sequence
gaattctccagtgtcctaggaatacaatacagctcgaactatccatgtcc
ttagaatatgctagcctctcacctagcttggctgatgtcccaagataata
agagctcaaataaatgacatcatcccagggtgaccaatggtagtaccttg
aaaaggtccaccaccaaatccttgccttaggttgtttgggcagccttttc
cctcttaaggtatgattaggagtcatttacattacacagatggagagagc
gttaagggcattttgcatgaagaggtaaggctcaatgtcaaacattggac
agagataatttgacgaatctttttggatttaattggtctccatgattctc
ataggaaagagagaatcagaagtaattgcttctatccctcctgggtttct
tttatctcaaaatgcagcattttatgagatgccctgtatccggcagaggg
tcacagggaacactcagcacatgacataggcctctcactctgcagaccat
tgtacaaactcagcacagactgcccatgaagagcgcacacaggctttccc
atctagtctctctgcttctcaaggtttcccccgagtatatgcttctccca
cctttggggggacatttaagtgtaatatccaaaaagctgcaatgttgagc
tgtgtgctggtaactctgcatagtgtggagaaaatttatcctattacatc
aaaatggtggttattttacacactgtcgacagcaatgcttgactgctaac
agatgcttttcttctttcaagctgggataaacttgcctcaagactcaccc
aagcaccattctttacctatattccctttagcttgtcctctgccatctcc
actgggcttataccagatgctttcttctctgctcattgaaaggcacttct
taatgcacatggtaatttttttttattggatacagccccacctatcgtac
tcaatgaatcactctcgatgaagccacaacagctgctctcattgcaatcc
agatcagacatgaattgggcatgctcaatatctcttacttttgccttgca
tcagaaaagttctgaattgtcagatgctagctgctgacttctgtctgcat
caaattgctcctgggaatctcccactcct
gaattctttcttggccattgaaaagatgtgtttatttgtgtgaggggtcc
ctggtcctgatgccagtgggtgtgtgaagcatcttgaaagcttgccttgt
caaccattttctttcccacaggtggctacacttcagtaattgcacatggc
ctcagtgatggagtttttataaagtcctttgagatccaatcataaaaaat
aattgtattactctgctagtcattcaaacccctgacttcagtctaagggg
ttataaacacaagacccatgcctgtaagtgtcgccctgcccccagccctg
ctgcctgagggacatttgttcttccaaccacattgttgcctataaaccct
ctcacagggcaggattttaaaatagcccccatcatgccccctaaagggcc
actgcaaagcacactgtacctcaggcgcctctctctcccgctaccccaaa
tgatgctaccccaacatgtggcctccatcacaaaggatctcacttgctaa
cccaacattccaggtcatcctttcgaagggggctgtgggaccctggattt
atagtgttctgatctgaactaaaggttcacttttggaacagaggcacaac
tgttattactacaataaatggtggcattctgtttccagttttgttaacat
tacctacaaatgaggatttgaaagaggcatgattttcctctcattatggt
ctctggcaggtagttctttccttcctcttcttctcaaggactgttattgc
ttcaacttggtttaataaaattacaactttggggaaaatgaaaaattgcc
ctggcttaaaagtgttggaggcaataaaggtatggacttcaattaatttc
aagtgtgggatcagcttaaggccaaccagcagaaattctattctgtccat
gtaaaatgagttcaccacatttacttttttataacctatataaagtcaag
taaagtatgatactaaagccatctcagtggcctgcaggactatctgatgc
tgacaccatctacatatttccttctttgcacagattcatgcctgatcaag
ctaaatggtcaactactagaaaaagccaatttcggccatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14215453_14216598
seq2: B6Ng01-058N15.b_49_1177 (reverse)

seq1  AGGAGTGGGAGATTCCCA-GAGCACATTGATGCAGACAGGAAGTTCAGCA  49
      |||||||||||||||||| |||||  |||||||||||| |||| ||||||
seq2  AGGAGTGGGAGATTCCCAGGAGCAATTTGATGCAGACA-GAAG-TCAGCA  48

seq1  GCTAGCATCCTGACAATCCAGAACTTGTCTGGATGCCAAGGGCAAAAGTT  99
      |||||||| |||||||| |||||||| ||| |||||  | |||||||| |
seq2  GCTAGCAT-CTGACAATTCAGAACTTTTCT-GATGC--AAGGCAAAAG-T  93

seq1  AAGAGATATTGAGCATGGCCCAATTCAATGTTCTGATCTTGGATTGCAAT  149
      |||||||||||||||| ||||||||| ||| ||||||| |||||||||||
seq2  AAGAGATATTGAGCAT-GCCCAATTC-ATG-TCTGATC-TGGATTGCAAT  139

seq1  GGAGAGGCAGCCTGTTGTGGCTTCATCGAGGAGTGATTCATTGAGGTAAC  199
       |||| |||| |||||||||||||||||| |||||||||||||||   ||
seq2  -GAGA-GCAG-CTGTTGTGGCTTCATCGA-GAGTGATTCATTGAG--TAC  183

seq1  GATAGGTGGGGGCTGTATCCAATAAAAAAAAATTACCATGTGCATTAAGA  249
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGT-GGGGCTGTATCCAATAAAAAAAAATTACCATGTGCATTAAGA  232

seq1  AGTGGCCTTCAATGAGCAGAGAAGAAAGCATCTGGTATAAGCCCAGTGGA  299
      |||| | |||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCTTTCAATGAGCAGAGAAGAAAGCATCTGGTATAAGCCCAGTGGA  282

seq1  GATGGCAGAGGACAAGCTAAAGGGAATATAGGTAAAGAATGGTGCTTGGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCAGAGGACAAGCTAAAGGGAATATAGGTAAAGAATGGTGCTTGGG  332

seq1  TGAGTCTTGAGGCAAGTTTATCCCAGCTTGAAAGAAGAAAAGCATCTGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCTTGAGGCAAGTTTATCCCAGCTTGAAAGAAGAAAAGCATCTGTT  382

seq1  AGCAGTCAAGCATTGCTGTCGACAGTGTGTAAAATAACCACCATTTTGAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCAAGCATTGCTGTCGACAGTGTGTAAAATAACCACCATTTTGAT  432

seq1  GTAATAGGATAAATTTTCTCCACACTATGCAGAGTTACCAGCACACAGCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATAGGATAAATTTTCTCCACACTATGCAGAGTTACCAGCACACAGCT  482

seq1  CAACATTGCAGCTTTTTGGATATTACACTTAAATGTCCCCCCAAAGGTGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTGCAGCTTTTTGGATATTACACTTAAATGTCCCCCCAAAGGTGG  532

seq1  GAGAAGCATATACTCGGGGGAAACCTTGAGAAGCAGAGAGACTAGATGGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCATATACTCGGGGGAAACCTTGAGAAGCAGAGAGACTAGATGGG  582

seq1  AAAGCCTGTGTGCGCTCTTCATGGGCAGTCTGTGCTGAGTTTGTACAATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTGTGTGCGCTCTTCATGGGCAGTCTGTGCTGAGTTTGTACAATG  632

seq1  GTCTGCAGAGTGAGAGGCCTATGTCATGTGCTGAGTGTTCCCTGTGACCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGCAGAGTGAGAGGCCTATGTCATGTGCTGAGTGTTCCCTGTGACCC  682

seq1  TCTGCCGGATACAGGGCATCTCATAAAATGCTGCATTTTGAGATAAAAGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCGGATACAGGGCATCTCATAAAATGCTGCATTTTGAGATAAAAGA  732

seq1  AACCCAGGAGGGATAGAAGCAATTACTTCTGATTCTCTCTTTCCTATGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGGAGGGATAGAAGCAATTACTTCTGATTCTCTCTTTCCTATGAG  782

seq1  AATCATGGAGACCAATTAAATCCAAAAAGATTCGTCAAATTATCTCTGTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGGAGACCAATTAAATCCAAAAAGATTCGTCAAATTATCTCTGTC  832

seq1  CAATGTTTGACATTGAGCCTTACCTCTTCATGCAAAATGCCCTTAACGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTTTGACATTGAGCCTTACCTCTTCATGCAAAATGCCCTTAACGCT  882

seq1  CTCTCCATCTGTGTAATGTAAATGACTCCTAATCATACCTTAAGAGGGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCATCTGTGTAATGTAAATGACTCCTAATCATACCTTAAGAGGGAA  932

seq1  AAGGCTGCCCAAACAACCTAAGGCAAGGATTTGGTGGTGGACCTTTTCAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGCCCAAACAACCTAAGGCAAGGATTTGGTGGTGGACCTTTTCAA  982

seq1  GGTACTACCATTGGTCACCCTGGGATGATGTCATTTATTTGAGCTCTTAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTACCATTGGTCACCCTGGGATGATGTCATTTATTTGAGCTCTTAT  1032

seq1  TATCTTGGGACATCAGCCAAGCTAGGTGAGAGGCTAGCATATTCTAAGGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGGGACATCAGCCAAGCTAGGTGAGAGGCTAGCATATTCTAAGGA  1082

seq1  CATGGATAGTTCGAGCTGTATTGTATTCCTAGGACACTGGAGAATTC  1146
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGATAGTTCGAGCTGTATTGTATTCCTAGGACACTGGAGAATTC  1129

seq1: chr18_14100962_14102076
seq2: B6Ng01-058N15.g_69_1158

seq1  GAATTCTTTCTTGGCCATTGAAAAGATGTGTTTATTTGTGTGAGGGGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTGGCCATTGAAAAGATGTGTTTATTTGTGTGAGGGGTCC  50

seq1  CTGGTCCTGATGCCAGTGGGTGTGTGAAGCATCTTGAAAGCTTGCCTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCCTGATGCCAGTGGGTGTGTGAAGCATCTTGAAAGCTTGCCTTGT  100

seq1  CAACCATTTTCTTTCCCACAGGTGGCTACACTTCAGTAATTGCACATGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCATTTTCTTTCCCACAGGTGGCTACACTTCAGTAATTGCACATGGC  150

seq1  CTCAGTGATGGAGTTTTTATAAAGTCCTTTGAGATCCAATCATAAAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGATGGAGTTTTTATAAAGTCCTTTGAGATCCAATCATAAAAAAT  200

seq1  AATTGTATTACTCTGCTAGTCATTCAAACCCCTGACTTCAGTCTAAGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTATTACTCTGCTAGTCATTCAAACCCCTGACTTCAGTCTAAGGGG  250

seq1  TTATAAACACAAGACCCATGCCTGTAAGTGTCGCCCTGCCCCCAGCCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAACACAAGACCCATGCCTGTAAGTGTCGCCCTGCCCCCAGCCCTG  300

seq1  CTGCCTGAGGGACATTTGTTCTTCCAACCACATTGTTGCCTATAAACCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGAGGGACATTTGTTCTTCCAACCACATTGTTGCCTATAAACCCT  350

seq1  CTCACAGGGCAGGATTTTAAAATAGCCCCCATCATGCCCCCTAAAGGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGGGCAGGATTTTAAAATAGCCCCCATCATGCCCCCTAAAGGGCC  400

seq1  ACTGCAAAGCACACTGTACCTCAGGCGCCTCTCTCTCCCGCTACCCCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAAAGCACACTGTACCTCAGGCGCCTCTCTCTCCCGCTACCCCAAA  450

seq1  TGATGCTACCCCAACATGTGGCCTCCATCACAAAGGATCTCACTTGCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTACCCCAACATGTGGCCTCCATCACAAAGGATCTCACTTGCTAA  500

seq1  CCCAACATTCCAGGTCATCCTTTCGAAGGGGGCTGTGGGACCCTGGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACATTCCAGGTCATCCTTTCGAAGGGGGCTGTGGGACCCTGGATTT  550

seq1  ATAGTGTTCTGATCTGAACTAAAGGTTCACTTTTGGAACAGAGGCACAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTTCTGATCTGAACTAAAGGTTCACTTTTGGAACAGAGGCACAAC  600

seq1  TGTTATTACTACAATAAATGGTGGCATTCTGTTTCCAGTTTTGTTAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTACTACAATAAATGGTGGCATTCTGTTTCCAGTTTTGTTAACAT  650

seq1  TACCTACAAATGAGGATTTGAAAGAGGCATGATTTTCCTCTCATTATGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTACAAATGAGGATTTGAAAGAGGCATGATTTTCCTCTCATTATGGT  700

seq1  CTCTGGCAGGTAGTTCTTTCCTTCCTCTTCTTCTCAAGGACTGTTATTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCAGGTAGTTCTTTCCTTCCTCTTCTTCTCAAGGACTGTTATTGC  750

seq1  TTCAACTTGGTTTAATAAAATTACAACTTTGGGGAAAATGAAAAATTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTTGGTTTAATAAAATTACAACTTTGGGGAAAATGAAAAATTGCC  800

seq1  CTGGCTTAAAAGTGTTGGAGGCAATAAAGGTATGGACTTCAATTAATTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTAAAAGTGTTGGAGGCAATAAAGGTATGGACTTCAATTAATTTC  850

seq1  AAGTGTGGGATCAGCTTAAGGCCAACCAGCAGAAATTCTATTCTGTCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGGGATCAGCTTAAGGCCAACCAGCAGAAATTCTATTCTGTCCAT  900

seq1  GTAAAAATGAGGTTTCACCACATTTACTTTTTTATAACCTATATAAAAGT  950
      || ||||||||  ||||||||||||||||||||||||||||||| |||||
seq2  GT-AAAATGAG--TTCACCACATTTACTTTTTTATAACCTATAT-AAAGT  946

seq1  CAAGTAAAAGTAATGAATACCTAAAAGCCATCTCAGTGGCCTGGCAGGGA  1000
      ||||| ||||| ||| ||||   ||||||||||||||||||| ||| |||
seq2  CAAGT-AAAGT-ATG-ATAC--TAAAGCCATCTCAGTGGCCT-GCA-GGA  989

seq1  CTATCTGAATGCTTGACACCATCTTACATATTTCTCTCTTTGCAACAAGG  1050
      ||||||| |||| |||||||||| ||||||||||  ||||||| |||  |
seq2  CTATCTG-ATGC-TGACACCATC-TACATATTTCCTTCTTTGC-ACA--G  1033

seq1  ATTCCATGCCTGATCAAAGCTAAAATGTCAAACTACTAAGAAAACAGCCC  1100
      ||| ||||||||||| ||||||||  ||| ||||||| |||||| || ||
seq2  ATT-CATGCCTGATC-AAGCTAAATGGTC-AACTACT-AGAAAA-AG-CC  1077

seq1  AATTTCCGAGCCATT  1115
      ||||||   ||||||
seq2  AATTTC--GGCCATT  1090