BAC Information

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BAC

Clone NameB6Ng01-060N10
Chromosome18 (Build37)
Map Location 59,454,673 - 59,575,055
singlet/doubletdoublet
Overlap gene4833446K15Rik
Upstream geneSlc27a6, Isoc1, Adamts19, A730017C20Rik
Downstream geneLOC667549, EG240327, LOC546714, EG225594, F830016B08Rik, LOC667578, EG667584, LOC435565, Iigp1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060N10.bB6Ng01-060N10.g
ACCDH881700DH881701
length1,1111,041
definitionDH881700|Mus musculus domesticus DNA, BAC clone: B6Ng01-060N10, 5' end.DH881701|Mus musculus domesticus DNA, BAC clone: B6Ng01-060N10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,454,673 - 59,455,794)(59,573,999 - 59,575,055)
sequence
gaattcctttacatgacctgctactataaggaatttgcttcatgttcttt
tgctagaaatctgcaaattaacacctctttctcctcctgcctgaatttca
tttttgttctgttatcacaagctgtgctgacattaggtgtgaatttttaa
aattacttttattgttagtttatggaaactgacaaccagggttttccaat
agcagttcaataacctccttgctgaaccattctctaattttccttgctga
gaattttggtttccttcatgacttatagccatgaattatttcagattgtt
gctttaacatgtgaccatagatgcaatggcacattcaatattgtattctc
tctgctattctgttatgaatacaggaacttctctgagaatttcatcacat
ctattcataatcagaaatggaaataactgtgtagaatcatgaggcagatg
ctactagcagtcactacacaaataggactgcacctataggagatttttac
tttggaataaattattgtgagttctggacctacatgctgtataagttaat
tcagtggttagttagttcatggatgagacatattagccttgaagaaaact
aatttactgaagaggctgccaaaatatgaggctactatttaaaagcagca
tatcatgtctaacatgctcacattattaagtggtacattatttgcctata
ggtcaatgcctggatttctaaattataagaataatggtgacattttaaag
aagtagcgaaataaatgtattttgtgggtaaactgttcaatatctaaagt
aatgcttcatgggcatccaatgtatattaccagatgctttcatggaaagc
atggattctgaaggtggaaagccgtgtgactcagaaacatagtgccatct
gatctgactcagaaacccctggatccatctgtctgtaaagatgtttcttc
tattagaggatcatcacaggtgttgacatgatattcttctccccggattt
tcataacttcttatagcttactgctcttctggcctgtgttttactctcac
tagctaaatagacaatccatatttcttctatctgcactcattattgggtc
tacattttgaa
gaattccaaaaacctgtttaagtattaataatgtatcaacgaactcaatc
tgaactctttgtcaacctgcagaactaatatattgaaaaagtctcattga
gataaaacccagtatggaatagaatcccacatgtggctcagatgttggtg
gcactgcagatcagaatagaagagggaagtggacaattgggtatgaaatt
gaagttgacactaaaatgtcctggcaggcacggtggtttctggattgatc
cagatgcagcttcgcttcatcaccatctgtgggaatgaatcattgctggt
gtctcacatcatcctcaccatctgtcatggcaaacttggcagaacggctg
gcatctgagggaggctgtggctgaaagaagctggaccacattgactacag
aagctactccctgttgatgtccctgaaggatacagggacttttcatcaat
acagacacaatcctctaatacagcatgctaaataaaagtaattaagatgc
tgaaaggaagatgacaggggaaagtaggcaagcccacagcagttaaaatc
tctccctttattatccgtgaagacatccccttgttggcttatcctgtacc
aatacccctcaacccagggcactttctaaaaactgaaacgcctttagtaa
ttaaacataaattagaaagtaagtgtataagtttcttgattcctagcagt
agataaatcactagagtaaagcacattagcttcctatagggctcaggacc
acaggcaattaactgaagcaagagatagtgggagcacagcggttagcttg
gctacctgagcagaatgtgcagagagctttgcttttgcattcaaacagta
ccatcaaggccaacatgaagctacagatatttcatgggctactggagact
tgcactgctatattatctccatgaacacgtgtgttaggaggagagaggag
aaggcaatctcagatcgagctctgcttatgtgtatccccagacacctaat
gagtctagcttgatgaattctgaacaatcagctgatagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59454673_59455794
seq2: B6Ng01-060N10.b_46_1156

seq1  GAATTCCTTTACATGACCTGCTACTATAAGGAATTTGCTTCATGTTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTACATGACCTGCTACTATAAGGAATTTGCTTCATGTTCTTT  50

seq1  TGCTAGAAATCTGCAAATTAACACCTCTTTCTCCTCCTGCCTGAATTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAAATCTGCAAATTAACACCTCTTTCTCCTCCTGCCTGAATTTCA  100

seq1  TTTTTGTTCTGTTATCACAAGCTGTGCTGACATTAGGTGTGAATTTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTCTGTTATCACAAGCTGTGCTGACATTAGGTGTGAATTTTTAA  150

seq1  AATTACTTTTATTGTTAGTTTATGGAAACTGACAACCAGGGTTTTCCAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTTTTATTGTTAGTTTATGGAAACTGACAACCAGGGTTTTCCAAT  200

seq1  AGCAGTTCAATAACCTCCTTGCTGAACCATTCTCTAATTTTCCTTGCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTCAATAACCTCCTTGCTGAACCATTCTCTAATTTTCCTTGCTGA  250

seq1  GAATTTTGGTTTCCTTCATGACTTATAGCCATGAATTATTTCAGATTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGGTTTCCTTCATGACTTATAGCCATGAATTATTTCAGATTGTT  300

seq1  GCTTTAACATGTGACCATAGATGCAATGGCACATTCAATATTGTATTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAACATGTGACCATAGATGCAATGGCACATTCAATATTGTATTCTC  350

seq1  TCTGCTATTCTGTTATGAATACAGGAACTTCTCTGAGAATTTCATCACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTATTCTGTTATGAATACAGGAACTTCTCTGAGAATTTCATCACAT  400

seq1  CTATTCATAATCAGAAATGGAAATAACTGTGTAGAATCATGAGGCAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCATAATCAGAAATGGAAATAACTGTGTAGAATCATGAGGCAGATG  450

seq1  CTACTAGCAGTCACTACACAAATAGGACTGCACCTATAGGAGATTTTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTAGCAGTCACTACACAAATAGGACTGCACCTATAGGAGATTTTTAC  500

seq1  TTTGGAATAAATTATTGTGAGTTCTGGACCTACATGCTGTATAAGTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATAAATTATTGTGAGTTCTGGACCTACATGCTGTATAAGTTAAT  550

seq1  TCAGTGGTTAGTTAGTTCATGGATGAGACATATTAGCCTTGAAGAAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGGTTAGTTAGTTCATGGATGAGACATATTAGCCTTGAAGAAAACT  600

seq1  AATTTACTGAAGAGGCTGCCAAAATATGAGGCTACTATTTAAAAGCAGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACTGAAGAGGCTGCCAAAATATGAGGCTACTATTTAAAAGCAGCA  650

seq1  TATCATGTCTAACATGCTCACATTATTAAGTGGTACATTATTTGCCTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGTCTAACATGCTCACATTATTAAGTGGTACATTATTTGCCTATA  700

seq1  GGTCAATGCCTGGATTTCTAAATTATAAGAATAATGGTGACATTTTAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAATGCCTGGATTTCTAAATTATAAGAATAATGGTGACATTTTAAAG  750

seq1  AAGTAGCGAAATAAATGTATTTTGTGGGTAAACTGTTCAATATCTAAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGCGAAATAAATGTATTTTGTGGGTAAACTGTTCAATATCTAAAGT  800

seq1  AATGCTTCATGGGCATCCAATGTATATTACCAGATGCTTTCATGGAAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTCATGGGCATCCAATGTATATTACCAGATGCTTTCATGGAAAGC  850

seq1  ATGGATTCTGAAGGTGGAAAGCCGTGTGACTCAGAAACATAGTGCCATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATTCTGAAGGTGGAAAGCCGTGTGACTCAGAAACATAGTGCCATCT  900

seq1  GATCTGACTCAGAAACCCCTGGATCCATCTGTCTGTAAAGATGTTTCTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGACTCAGAAACCCCTGGATCCATCTGTCTGTAAAGATGTTTCTTC  950

seq1  TAATTAGAGGAATCATCACAGGTGTTGACATGATATTCTTCTCCCCGGAT  1000
      | |||||||| |||||||||||||||||||||||||||||||||||||| 
seq2  T-ATTAGAGG-ATCATCACAGGTGTTGACATGATATTCTTCTCCCCGGA-  997

seq1  TTTTCATAACTTCTTATAGCTTACTTGCTCCTTCTGGCCTTGTGTTTTAC  1050
      |||||||||||||||||||||||| |||| ||||||||| ||||||||||
seq2  TTTTCATAACTTCTTATAGCTTAC-TGCT-CTTCTGGCC-TGTGTTTTAC  1044

seq1  TCTCACTAGCTAAATAGACAATCCATATTTCTTTCCTATCTTGCCACTCA  1100
      |||||||||||||||||||||||||||||||||  ||||||   ||||||
seq2  TCTCACTAGCTAAATAGACAATCCATATTTCTT--CTATCT--GCACTCA  1090

seq1  TTTATTGGGTCTACATTTTGAA  1122
       |||||||||||||||||||||
seq2  -TTATTGGGTCTACATTTTGAA  1111

seq1: chr18_59573999_59575055
seq2: B6Ng01-060N10.g_67_1107 (reverse)

seq1  TTTCTATCAGCTTGATTGTTCAGAAATTCATTCAGCTAAGACTCATTATG  50
      ||||||||||| ||||||||||| |||||||  |||| |||||||||| |
seq2  TTTCTATCAGC-TGATTGTTCAG-AATTCATCAAGCT-AGACTCATTA-G  46

seq1  TTGTCCTGGGGATAACACCATAGGCAGAGCTCGATCTGGAGATTTGCCTT  100
       ||| |||||||| ||| |||| |||||||||||||| |||| |||||||
seq2  GTGT-CTGGGGAT-ACA-CATAAGCAGAGCTCGATCT-GAGA-TTGCCTT  91

seq1  CTCCCTTCTCTCCCTCCTAACACCACGTTGGTTCATGGAGATAAATATAG  150
      ||||  ||||| |||||||||| |||||  |||||||||||| |||||||
seq2  CTCC--TCTCT-CCTCCTAACA-CACGT--GTTCATGGAGAT-AATATAG  134

seq1  CAGTGCAAGTCTCCAGTAGCCCATGAAATATCTGTAGCTTCATGTTGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCAAGTCTCCAGTAGCCCATGAAATATCTGTAGCTTCATGTTGGCC  184

seq1  TTGATGGTACTGTTTGAATGCAAAAGCAAAGCTCTCTGCACATTCTGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGTACTGTTTGAATGCAAAAGCAAAGCTCTCTGCACATTCTGCTC  234

seq1  AGGTAGCCAAGCTAACCGCTGTGCTCCCACTATCTCTTGCTTCAGTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGCCAAGCTAACCGCTGTGCTCCCACTATCTCTTGCTTCAGTTAAT  284

seq1  TGCCTGTGGTCCTGAGCCCTATAGGAAGCTAATGTGCTTTACTCTAGTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTGGTCCTGAGCCCTATAGGAAGCTAATGTGCTTTACTCTAGTGA  334

seq1  TTTATCTACTGCTAGGAATCAAGAAACTTATACACTTACTTTCTAATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTACTGCTAGGAATCAAGAAACTTATACACTTACTTTCTAATTTA  384

seq1  TGTTTAATTACTAAAGGCGTTTCAGTTTTTAGAAAGTGCCCTGGGTTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAATTACTAAAGGCGTTTCAGTTTTTAGAAAGTGCCCTGGGTTGAG  434

seq1  GGGTATTGGTACAGGATAAGCCAACAAGGGGATGTCTTCACGGATAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATTGGTACAGGATAAGCCAACAAGGGGATGTCTTCACGGATAATAA  484

seq1  AGGGAGAGATTTTAACTGCTGTGGGCTTGCCTACTTTCCCCTGTCATCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGAGATTTTAACTGCTGTGGGCTTGCCTACTTTCCCCTGTCATCTT  534

seq1  CCTTTCAGCATCTTAATTACTTTTATTTAGCATGCTGTATTAGAGGATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCAGCATCTTAATTACTTTTATTTAGCATGCTGTATTAGAGGATTG  584

seq1  TGTCTGTATTGATGAAAAGTCCCTGTATCCTTCAGGGACATCAACAGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTATTGATGAAAAGTCCCTGTATCCTTCAGGGACATCAACAGGGA  634

seq1  GTAGCTTCTGTAGTCAATGTGGTCCAGCTTCTTTCAGCCACAGCCTCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTTCTGTAGTCAATGTGGTCCAGCTTCTTTCAGCCACAGCCTCCCT  684

seq1  CAGATGCCAGCCGTTCTGCCAAGTTTGCCATGACAGATGGTGAGGATGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCCAGCCGTTCTGCCAAGTTTGCCATGACAGATGGTGAGGATGAT  734

seq1  GTGAGACACCAGCAATGATTCATTCCCACAGATGGTGATGAAGCGAAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGACACCAGCAATGATTCATTCCCACAGATGGTGATGAAGCGAAGCT  784

seq1  GCATCTGGATCAATCCAGAAACCACCGTGCCTGCCAGGACATTTTAGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGGATCAATCCAGAAACCACCGTGCCTGCCAGGACATTTTAGTGT  834

seq1  CAACTTCAATTTCATACCCAATTGTCCACTTCCCTCTTCTATTCTGATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCAATTTCATACCCAATTGTCCACTTCCCTCTTCTATTCTGATCT  884

seq1  GCAGTGCCACCAACATCTGAGCCACATGTGGGATTCTATTCCATACTGGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGCCACCAACATCTGAGCCACATGTGGGATTCTATTCCATACTGGG  934

seq1  TTTTATCTCAATGAGACTTTTTCAATATATTAGTTCTGCAGGTTGACAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTCAATGAGACTTTTTCAATATATTAGTTCTGCAGGTTGACAAA  984

seq1  GAGTTCAGATTGAGTTCGTTGATACATTATTAATACTTAAACAGGTTTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCAGATTGAGTTCGTTGATACATTATTAATACTTAAACAGGTTTTT  1034

seq1  GGAATTC  1057
      |||||||
seq2  GGAATTC  1041