BAC Information

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BAC

Clone NameB6Ng01-061M13
Chromosome18 (Build37)
Map Location 52,848,447 - 52,849,597
singlet/doubletsinglet
Overlap genenone
Upstream geneEG240289, Ftmt, Srfbp1, Lox, Zfp474, 1700034E13Rik
Downstream geneGykl1, Sncaip, A730036E13Rik, LOC667317, LOC100042430, Snx2, Gm1859, Snx24, Ppic, Prdm6, Ccdc100
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061M13.bB6Ng01-061M13.g
ACCDH882368DH882369
length1,139556
definitionDH882368|Mus musculus domesticus DNA, BAC clone: B6Ng01-061M13, 5' end.DH882369|Mus musculus domesticus DNA, BAC clone: B6Ng01-061M13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttctccagagaaagaaaacattgtttcattgacagtcttggag
aagaacagtttgttggttactacatgggaattagaagctggagatcggaa
cacagaagagacaggcttcgcgtcctaaagcagcaaagtacatttaaaca
gagaggattctctcacttttcccagggacgtttggaccatactcagatga
ctgaagtcagtaatgacaagcacttaacatattaattataagacaagccc
actacattttgaaaaactaaaacagcggttgattataacttagtaaattt
tttaaaattcagaaacgcaggagcctatcaagtttcctaggtagttcaat
ttcatatgaatgtatatatactactttaccagaaaactcactacatagac
tgggttcccttatgttctggaactactcagaattttctagtaaccatatc
tacctgtctttcccctttctgcatgcttgtgaagaagtgtaaagtttgta
cccttggttttgtatgtaataatttatttgtatttggactcttctaaatt
atgcccataccttgccaaaacctttactttggcaaagctttgccataaaa
tctgagtataaaaggctgcttcccagtatggatggagaaaagatgagata
gagggatttgatgaagtctttttagaagctattattatgtgcatgtggat
taaaggaacctaatccagttgcaatttttctttgaaggtggtgccaaaga
ggaatttatttttctttgtagtaatgctatgacttaaaataacttaccta
gtaattagtgacttcatgggaaagaaaagtctcactagtgtttgttttac
tagagaagaaagcaaagaagccaagatgcggtagaccagttctcttcatc
cttcagcaatgggagatgtttatctgctctccttgatcactctgtgtgca
tctggatgaggccaagctttctgccaagtgtgcagagctgagtcttgcta
gccagaaaaccacatcacttgcagctattgctctggctgatgacctttac
tctgtagctcactttgaacagtgatggggccatatgagtttcttgctgct
aatgtaaatacagtccttggggtagttctgctttctttc

actgtgaggagaagggtatggctcctcactgtggagaggagcagagaaat
aaagaatggctgaaccccatttttattctttttccctcttattctactgg
gattcccaccctgtcacattctgggcaagtttctcttccttagttaattc
tatctagaaacaatcacatctggaaagaggattcactaattgcctggtgc
taatgcttcacttaagtggctctcaattaagattaagcatatctgtagat
tttccaagattcataatgttattaactgctggttttttatcatcgtggtc
tgagataatactaagtatgatttcaatccttgtgaatttgttaaggcttg
ctttgtgatatgtactcacttataagtggacattagccataaagtacagg
acaaccatgctacaattcacagacccaaaacaaactgggtgatactgaag
tctcaagggaggattgtgaagcttactcagaaggggaaactaaacagtca
tctgatgtgcatggagagaggaagctgggtaggagaggaggtgaggaggg
gaacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_52848447_52849597
seq2: B6Ng01-061M13.b_49_1187

seq1  GAATTCTTTCTCCAGAGAAAGAAAACATTGTTTCATTGACAGTCTTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTCCAGAGAAAGAAAACATTGTTTCATTGACAGTCTTGGAG  50

seq1  AAGAACAGTTTGTTGGTTACTACATGGGAATTAGAAGCTGGAGATCGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGTTTGTTGGTTACTACATGGGAATTAGAAGCTGGAGATCGGAA  100

seq1  CACAGAAGAGACAGGCTTCGCGTCCTAAAGCAGCAAAGTACATTTAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAGAGACAGGCTTCGCGTCCTAAAGCAGCAAAGTACATTTAAACA  150

seq1  GAGAGGATTCTCTCACTTTTCCCAGGGACGTTTGGACCATACTCAGATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGATTCTCTCACTTTTCCCAGGGACGTTTGGACCATACTCAGATGA  200

seq1  CTGAAGTCAGTAATGACAAGCACTTAACATATTAATTATAAGACAAGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTCAGTAATGACAAGCACTTAACATATTAATTATAAGACAAGCCC  250

seq1  ACTACATTTTGAAAAACTAAAACAGCGGTTGATTATAACTTAGTAAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATTTTGAAAAACTAAAACAGCGGTTGATTATAACTTAGTAAATTT  300

seq1  TTTAAAATTCAGAAACGCAGGAGCCTATCAAGTTTCCTAGGTAGTTCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATTCAGAAACGCAGGAGCCTATCAAGTTTCCTAGGTAGTTCAAT  350

seq1  TTCATATGAATGTATATATACTACTTTACCAGAAAACTCACTACATAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATGAATGTATATATACTACTTTACCAGAAAACTCACTACATAGAC  400

seq1  TGGGTTCCCTTATGTTCTGGAACTACTCAGAATTTTCTAGTAACCATATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTCCCTTATGTTCTGGAACTACTCAGAATTTTCTAGTAACCATATC  450

seq1  TACCTGTCTTTCCCCTTTCTGCATGCTTGTGAAGAAGTGTAAAGTTTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTCTTTCCCCTTTCTGCATGCTTGTGAAGAAGTGTAAAGTTTGTA  500

seq1  CCCTTGGTTTTGTATGTAATAATTTATTTGTATTTGGACTCTTCTAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGTTTTGTATGTAATAATTTATTTGTATTTGGACTCTTCTAAATT  550

seq1  ATGCCCATACCTTGCCAAAACCTTTACTTTGGCAAAGCTTTGCCATAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCATACCTTGCCAAAACCTTTACTTTGGCAAAGCTTTGCCATAAAA  600

seq1  TCTGAGTATAAAAGGCTGCTTCCCAGTATGGATGGAGAAAAGATGAGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTATAAAAGGCTGCTTCCCAGTATGGATGGAGAAAAGATGAGATA  650

seq1  GAGGGATTTGATGAAGTCTTTTTAGAAGCTATTATTATGTGCATGTGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGATTTGATGAAGTCTTTTTAGAAGCTATTATTATGTGCATGTGGAT  700

seq1  TAAAGGAACCTAATCCAGTTGCAATTTTTCTTTGAAGGTGGTGCCAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAACCTAATCCAGTTGCAATTTTTCTTTGAAGGTGGTGCCAAAGA  750

seq1  GGAATTTATTTTTCTTTGTAGTAATGCTATGACTTAAAATAACTTACCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTTATTTTTCTTTGTAGTAATGCTATGACTTAAAATAACTTACCTA  800

seq1  GTAATTAGTGACTTCATGGGAAAGAAAAGTCTCACTAGTGTTTGTTTTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTAGTGACTTCATGGGAAAGAAAAGTCTCACTAGTGTTTGTTTTAC  850

seq1  TAGAGAAGAAAGCAAAGAAGCCAAGATGCGGTAGACCAGTTCTCTTCATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAGAAAGCAAAGAAGCCAAGATGCGGTAGACCAGTTCTCTTCATC  900

seq1  CTTCAGCAATGGGAGATGTTTATCTGCTTCTCCTTGATCACTCTGTGTGC  950
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTTCAGCAATGGGAGATGTTTATCTGC-TCTCCTTGATCACTCTGTGTGC  949

seq1  ATCTGGATGAGGCCAAGGCTTTCTGCCAAGTGTGCAGAGCTGAGTCTTGC  1000
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATCTGGATGAGGCCAA-GCTTTCTGCCAAGTGTGCAGAGCTGAGTCTTGC  998

seq1  TAGCCAGAAAACCACATCACTTGCAGCTATTGCTCCTGGCTTGATGACCC  1050
      |||||||||||||||||||||||||||||||||| ||||| |||||||| 
seq2  TAGCCAGAAAACCACATCACTTGCAGCTATTGCT-CTGGC-TGATGACCT  1046

seq1  TTACTCTGTAGCTCACTTTGAACAGTGATGGGGCAATATGAGTTTCTTGC  1100
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTACTCTGTAGCTCACTTTGAACAGTGATGGGGCCATATGAGTTTCTTGC  1096

seq1  TGCTAAATGTAAATACAAGGCACCTTGGTGTAAGTTTCCTGCTTTCCTTT  1150
      |||| ||||||||||||     |||||| || ||||  ||||||| ||||
seq2  TGCT-AATGTAAATACA---GTCCTTGGGGT-AGTT--CTGCTTT-CTTT  1138

seq1  C  1151
      |
seq2  C  1139


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