BAC Information

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BAC

Clone NameB6Ng01-061P11
Chromosome18 (Build37)
Map Location 22,319,894 - 22,321,062
singlet/doubletsinglet
Overlap gene4921528I01Rik
Upstream geneGm944, LOC665722, LOC225264, Klhl14
Downstream geneLOC546708, LOC100040547, Asxl3, Nol4, LOC100040579
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061P11.bB6Ng01-061P11.g
ACCDH882498DH882499
length1,1601,062
definitionDH882498|Mus musculus domesticus DNA, BAC clone: B6Ng01-061P11, 5' end.DH882499|Mus musculus domesticus DNA, BAC clone: B6Ng01-061P11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatctcatgtgagttccaaaattaaaatctaataaacgtggaaa
gactaagtccccttaaatatgacctcagcagaaggtcacagggtctttcc
tggctgtcaagcttgagagctaaattagaaacaggtaattttgtgttcta
tcccttcttaatcatcactccatttttagcctctggttccttgccagagc
ccagggaatggaaagaaaataagagactgaacccagtaagcaaacaagga
gtccggggaagtaagacaatgaagcttcatttcctcttaagtgctacaaa
ccacgagttgagaaaatttaataaaaggctgaggtttcctgttactggct
tcattctaaacagtgggggccctcaatggcagcccactccgcaactagct
gatcgctcaacagcaatcatgccagagtgtttttgactcacagaaaggta
tgctttcccatatattttggaaagaatgtcactgtagttgtcattatacc
atgagacataaaagtacagctttggcaaatgactgttgtagaattatttt
aaatactaataccctgttatagtattatttcaaacagtaaaactcgggtt
ctttttaattatttgggcttacaaatatatcatttttttccgcaagttgt
gtattttgggtattaaatgatctactagtatccaaaatagaaattaaaat
cacccaacaagggtttgaggggtagctcagtaaattaagtcctttccgct
caaaaatgaggaccagagtttggatccttacagcaccccccccccatatg
ggtgtggcagtaaacatctgtgatcccagtcccgggggagaaaaaaaaaa
gacaggagaatcccttgggctctgtagccagccaggcaaaccaaatcagt
gagttgtagtctcagtgagagaccctggagactgggctagagagagctta
gtcagtaaagtgctgtacagagatctaagttcaggtcctagaaacagatg
taaaggctgaatgttggtggtgcagacggtgacccaagacttgagggttc
agaactagcagaacctgaggtcagcagccaaccaggctactggatagctt
caaggctactggaagccttgtctcaaaaataaaggtggtaagaactggtc
ggtagcctag
gaattctgtggactgtatcttgtgtatgctgtatggatttttttttgcta
atatccacttattagtgaatacacaccatgcatgtcttttgagtctgagt
tacttcactcaggatgatattttctaattccatccatttgtctgcaaaca
tcaggatgtcctcattcttaatagctgagtttccattgtataaatgaacc
acattttctgtatccattcttctgttgtgggacatctaggttttttcagc
ttctggctatcacaaataagtccactatgaacatagtggaacatgggacc
ctgtggcatggtgggccagcttttgggtatttgcccaagagtggtataac
tgggtctttaggtagatctcttttcaattttctaaggaacctccagattg
atttcaagagtggttgtaccagtttgcaatcccaccagcaatggaggagt
gttcctctttctccacatcctctccaacatgtgttgtaacctgaggtttt
gatcttagccattctgactggtgtgaggtggaatctcagggtcattttga
tttgcatttctctgatcactaaagattttaaagttttctttaggtgcttg
tcagccatttgagattcctaagttgtgaattcttggtttagttttatacc
ccattttttgattgggttgtttggtgttttggtgattaacttcttgagtt
ctttatatattgtgggtattagctctctatcagatgtgtggttagtgaag
attttttcccaatctgtaggttactgatctgtcttattaactatgacctt
tgtcttacagaagtatttcagtttatgaggtcccatttatcaattctttt
ttattaagatattttcttcatttacatatcaaatgctttccaaaagtccc
ctactacccacctcctccctcctgccctgctccgcaactaccacttctgc
ttctgcctggcattccctgtactagagctaagatcttacaagaccaaggg
ccttcttctccattaagacactaggccatactctgcatcttatcacctat
gaacaaatcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22319894_22321062
seq2: B6Ng01-061P11.b_49_1208

seq1  GAATTCTATCTCATGTGAGTTCCAAAATTAAAATCTAATAAACGTGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCTCATGTGAGTTCCAAAATTAAAATCTAATAAACGTGGAAA  50

seq1  GACTAAGTCCCCTTAAATATGACCTCAGCAGAAGGTCACAGGGTCTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAGTCCCCTTAAATATGACCTCAGCAGAAGGTCACAGGGTCTTTCC  100

seq1  TGGCTGTCAAGCTTGAGAGCTAAATTAGAAACAGGTAATTTTGTGTTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCAAGCTTGAGAGCTAAATTAGAAACAGGTAATTTTGTGTTCTA  150

seq1  TCCCTTCTTAATCATCACTCCATTTTTAGCCTCTGGTTCCTTGCCAGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTTAATCATCACTCCATTTTTAGCCTCTGGTTCCTTGCCAGAGC  200

seq1  CCAGGGAATGGAAAGAAAATAAGAGACTGAACCCAGTAAGCAAACAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGAATGGAAAGAAAATAAGAGACTGAACCCAGTAAGCAAACAAGGA  250

seq1  GTCCGGGGAAGTAAGACAATGAAGCTTCATTTCCTCTTAAGTGCTACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCGGGGAAGTAAGACAATGAAGCTTCATTTCCTCTTAAGTGCTACAAA  300

seq1  CCACGAGTTGAGAAAATTTAATAAAAGGCTGAGGTTTCCTGTTACTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGAGTTGAGAAAATTTAATAAAAGGCTGAGGTTTCCTGTTACTGGCT  350

seq1  TCATTCTAAACAGTGGGGGCCCTCAATGGCAGCCCACTCCGCAACTAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTAAACAGTGGGGGCCCTCAATGGCAGCCCACTCCGCAACTAGCT  400

seq1  GATCGCTCAACAGCAATCATGCCAGAGTGTTTTTGACTCACAGAAAGGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGCTCAACAGCAATCATGCCAGAGTGTTTTTGACTCACAGAAAGGTA  450

seq1  TGCTTTCCCATATATTTTGGAAAGAATGTCACTGTAGTTGTCATTATACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCCCATATATTTTGGAAAGAATGTCACTGTAGTTGTCATTATACC  500

seq1  ATGAGACATAAAAGTACAGCTTTGGCAAATGACTGTTGTAGAATTATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACATAAAAGTACAGCTTTGGCAAATGACTGTTGTAGAATTATTTT  550

seq1  AAATACTAATACCCTGTTATAGTATTATTTCAAACAGTAAAACTCGGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTAATACCCTGTTATAGTATTATTTCAAACAGTAAAACTCGGGTT  600

seq1  CTTTTTAATTATTTGGGCTTACAAATATATCATTTTTTTCCGCAAGTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAATTATTTGGGCTTACAAATATATCATTTTTTTCCGCAAGTTGT  650

seq1  GTATTTTGGGTATTAAATGATCTACTAGTATCCAAAATAGAAATTAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTGGGTATTAAATGATCTACTAGTATCCAAAATAGAAATTAAAAT  700

seq1  CACCCAACAAGGGTTTGAGGGGTAGCTCAGTAAATTAAGTCCTTTCCGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAACAAGGGTTTGAGGGGTAGCTCAGTAAATTAAGTCCTTTCCGCT  750

seq1  CAAAAATGAGGACCAGAGTTTGGATCCTTACAGCACCCCCCCCCCATATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATGAGGACCAGAGTTTGGATCCTTACAGCACCCCCCCCCCATATG  800

seq1  GGTGTGGCAGTAAACATCTGTGATCCCAGTCCCGGGGGAGAAAAAAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGCAGTAAACATCTGTGATCCCAGTCCCGGGGGAGAAAAAAAAAA  850

seq1  GACAGGAGAATCCCTTGGGCTCTGTAGCCAGCCAGGCAAACCAAATCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGAGAATCCCTTGGGCTCTGTAGCCAGCCAGGCAAACCAAATCAGT  900

seq1  GAGTTGTAGTCTCAGTGAGAGACCCTGGAGACTGGGCTAGAGAGAGCTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTAGTCTCAGTGAGAGACCCTGGAGACTGGGCTAGAGAGAGCTTA  950

seq1  GTCAGTAAAGTGCTGTACAGAGATCTAAGTTCAGGTCCTAGAAACAGATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTAAAGTGCTGTACAGAGATCTAAGTTCAGGTCCTAGAAACAGATG  1000

seq1  TAAAGGCTGAATG-TGGTGGTGCAAGACGGTGAACCAAGACTTGAGGGTT  1049
      ||||||||||||| ||||||||| ||||||||| ||||||||||||||||
seq2  TAAAGGCTGAATGTTGGTGGTGC-AGACGGTGACCCAAGACTTGAGGGTT  1049

seq1  CAGAAACTAGCAGAACCCTGAAGTTCAGCAGCCAACCAGGCTAACTGGAT  1099
      ||| ||||||||||| |||| || |||||||||||||||||| |||||| 
seq2  CAG-AACTAGCAGAA-CCTG-AGGTCAGCAGCCAACCAGGCT-ACTGGA-  1094

seq1  TAGCTTCAAGGCTACTGAAAGCTGGGTCTCAAAAAATAAAAGTGGTAAAA  1149
      ||||||||||||||||| ||||   ||||| ||||||||| |||||  ||
seq2  TAGCTTCAAGGCTACTGGAAGCCTTGTCTC-AAAAATAAAGGTGGT--AA  1141

seq1  GAACTGGCCAGGTAGCCTAG  1169
      ||||||| | ||||||||||
seq2  GAACTGGTC-GGTAGCCTAG  1160