BAC Information

Click to search

BAC

Clone NameB6Ng01-066B02
Chromosome18 (Build37)
Map Location 27,703,278 - 27,703,812
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665977
Downstream geneEG665646, EG271505, EG625997
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066B02.bB6Ng01-066B02.g
ACCDH885354DH885355
length1,156529
definitionDH885354|Mus musculus domesticus DNA, BAC clone: B6Ng01-066B02, 5' end.DH885355|Mus musculus domesticus DNA, BAC clone: B6Ng01-066B02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaaacattaaaaataaatctaccatgtgatacaactataccc
tttcttggcatatgccaaaaggatccaacattctttcctgcagatacttt
tacatccacattcagtgctgctttatcactatagctaggaaatggaaaca
gtctaaatgcccttcagctgtccagattaatggttaatgaaagtatgcta
cacatatactctggaatattgttcagctataacaaaacaaaaattatgaa
cttttcaggtgtcttagtcagggtttctattcccgcacaaacatcatgac
caagaagcaaataggggaggaaagggtttattcagcttacacttccatat
tgttggtcatcaccaaggaagtcaggactggaactcaagcaggtcagaaa
gcaggagctgatgcagaggccatggaggggtgttctttggcttgcttccc
ctggcttgctcagcctgctctcttatagaaccaagactaccagcccagag
atggtaccacccacaaggggccctccctccttgatcactaattgagaaaa
tgccttacaaatggatctcattgaggcatttccccaaatgatgctccttt
ctctgtgataactccagctgtgtcaagttgacacaaaactagccagtaca
tcaggtaaattgatggaactagaaaagatcacattagtgaggcaactctg
atacagaaagacaaaagttcttcttctcagtttcctagcaccacattttc
tgatgtgaatacatagcctagaataattgccaaaaccaggaaatttaaaa
acattgtcaggataggggaactgggcagcaaaagagagtagaatagcaga
tttcaagtgaacagggaaatgggaaaggggaggtagataatacagtaaaa
ggaaggaagaaattgaaacaactcaaagttttcttgattcagtcataagg
gataagattactaattttgtacttaaaagtataagcagtaaatgttgggt
cctgtttgtatagccagtctgttagtctatgtctttttattggggattga
gtccattgaatttagagaatttaagggaagaattgtgctcctaatattta
gtgtaagattgcattctgttctgtgtgcaatcctcttttaggatgtgagg
attctc
tgtgcactaatcagcagtgtatttggttatgtgacaattaactattagaa
ctgttagggaaattcattagaataaaagaaggggaagcatgctgtttcaa
tcaggaggggtccatagacaatctgaatgtctctgtagttttccttctga
atgctttttgtttgcaatatgtttcttattcaattttttgagtaattcca
ttttttgtaatgtatataaggaaaggagtgtgggtatgatggatgaagaa
tgaattgaatcagtcctaaccatttatactttggcagtatgaattttaaa
aactcatagccctaaactaaaatgagggatggctacctttcctccatttg
attatccatctcccagtctcttactttctccactacttttgatattatca
aagtttattcagcagatctttctagaatcttcctatcagctatgtgtaaa
actgatatgaagacaggattctctaagtaaaatctccaagtattctttca
taaactaacctaaaaaatgaaaactctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_27703278_27703812
seq2: B6Ng01-066B02.g_69_603 (reverse)

seq1  AGAGAGTTTTCATTTTTTAGGTTAGTTTATGAAAGAATACTTGGAGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTTTTCATTTTTTAGGTTAGTTTATGAAAGAATACTTGGAGATTT  50

seq1  TACTTAGAGAATCCTGTCTTCATATCAGTTTTACACATAGCTGATAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGAGAATCCTGTCTTCATATCAGTTTTACACATAGCTGATAGGAA  100

seq1  GATTCTAGAAAGATCTGCTGAATAAACTTTGATAATATCAAAAGTAGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTAGAAAGATCTGCTGAATAAACTTTGATAATATCAAAAGTAGTGG  150

seq1  AGAAAGTAAGAGACTGGGAGATGGATAATCAAATGGAGGAAAGGTAGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTAAGAGACTGGGAGATGGATAATCAAATGGAGGAAAGGTAGCCA  200

seq1  TCCCTCATTTTAGTTTAGGGCTATGAGTTTTTAAAATTCATACTGCCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCATTTTAGTTTAGGGCTATGAGTTTTTAAAATTCATACTGCCAAA  250

seq1  GTATAAATGGTTAGGATTGATTCAATTCATTCTTCATCCATCATACCCAC  300
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTATAAATGGTTAGGACTGATTCAATTCATTCTTCATCCATCATACCCAC  300

seq1  ACTCCTTTCCTTATATACATTACAAAAAATGGAATTACTCAAAAAATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTTCCTTATATACATTACAAAAAATGGAATTACTCAAAAAATTGA  350

seq1  ATAAGAAACATATTGCAAACAAAAAGCATTCAGAAGGAAAACTACAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAACATATTGCAAACAAAAAGCATTCAGAAGGAAAACTACAGAGA  400

seq1  CATTCAGATTGTCTATGGACCCCTCCTGATTGAAACAGCATGCTTCCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGATTGTCTATGGACCCCTCCTGATTGAAACAGCATGCTTCCCCT  450

seq1  TCTTTTATTCTAATGAATTTCCCTAACAGTTCTAATAGTTAATTGTCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATTCTAATGAATTTCCCTAACAGTTCTAATAGTTAATTGTCACA  500

seq1  TAACCAAATACACTGCTGATTAGTGCACAGAATTC  535
      |||||||||||||||||||||||||||||||||||
seq2  TAACCAAATACACTGCTGATTAGTGCACAGAATTC  535