BAC Information

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BAC

Clone NameB6Ng01-067D15
Chromosome15 (Build37)18 (Build37)
Map Location 12,020,232 - 12,020,46264,633,833 - 64,634,575
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAdamts12, Tars, LOC100039772, Npr3, LOC381002, Sub1, LOC100040027
Downstream geneZfr, LOC100040052, LOC100040066, Mtmr12, LOC100039846, Golph3, Pdzd2, LOC100040109, 6030458C11Rik, Rnasen, Cdh6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067D15.bB6Ng01-067D15.g
ACCDH886182DH886183
length231194
definitionDH886182|Mus musculus domesticus DNA, BAC clone: B6Ng01-067D15, 5' end.DH886183|Mus musculus domesticus DNA, BAC clone: B6Ng01-067D15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(12,020,232 - 12,020,462)(64,633,833 - 64,634,575)
sequence
gaattccatcaaatgaacaaaacttgccgtgaagctagtcgacactgaga
caacatccgctttagagagatttcaaatgagaaggttaacgtagcagtgg
gcaggggtgaaggcctaagagcttgcgatctttgagtgtgattttgttct
tctcccagacataaacctgcgatcttctggaaccctggaaacaaggttaa
aaactttgtttatggggagggggaagggtat
caccgtaactaaagaatgttgagagtgggaaaaacagtcttccccagaaa
agagtcctgtaacttgctgtcccacaccaagacgtagaatgtatgcatcc
atacaagtaacattatacagactgggcaggctatagtgatgtatatgcac
tcagagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_12020232_12020462
seq2: B6Ng01-067D15.b_41_271 (reverse)

seq1  ATACCCTTCCCCCTCCCCATAAACAAAGTTTTTAACCTTGTTTCCAGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCTTCCCCCTCCCCATAAACAAAGTTTTTAACCTTGTTTCCAGGGT  50

seq1  TCCAGAAGATCGCAGGTTTATGTCTGGGAGAAGAACAAAATCACACTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAGATCGCAGGTTTATGTCTGGGAGAAGAACAAAATCACACTCAA  100

seq1  AGATCGCAAGCTCTTAGGCCTTCACCCCTGCCCACTGCTACGTTAACCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCGCAAGCTCTTAGGCCTTCACCCCTGCCCACTGCTACGTTAACCTT  150

seq1  CTCATTTGAAATCTCTCTAAAGCGGATGTTGTCTCAGTGTCGACTAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTGAAATCTCTCTAAAGCGGATGTTGTCTCAGTGTCGACTAGCTT  200

seq1  CACGGCAAGTTTTGTTCATTTGATGGAATTC  231
      |||||||||||||||||||||||||||||||
seq2  CACGGCAAGTTTTGTTCATTTGATGGAATTC  231

seq1: chr18_64633833_64634575
seq2: B6Ng01-067D15.g_219_267 (reverse)

seq1  CACACACACACACACACACACTCACACACACACACACACACACACACACA  50
                                                        
seq2  --------------------------------------------------  0

seq1  CACACACACACACACACACACACACACACACACACACACACACACACACA  100
                                                        
seq2  --------------------------------------------------  0

seq1  CATTCTCTCTCCCCCTCTTTCTTATACACACAGGTATACACACACTCATA  150
                                                        
seq2  --------------------------------------------------  0

seq1  TATTCTCTCTCTCTCTCTCTCTCTCTCACACACACACGCACACACTCTCT  200
                                                        
seq2  --------------------------------------------------  0

seq1  CTCTCTCTCACACACATACTCTCTCTCACACACACACACACTCTCTCTCT  250
                                                        
seq2  --------------------------------------------------  0

seq1  CACACACATACTCTCTCACACACACTCTCTCTCTCTCTCTCTCACACACA  300
                                                        
seq2  --------------------------------------------------  0

seq1  CACACACACACACACACACACACACACACATACACATTCTCTTTCCCTCT  350
                                                        
seq2  --------------------------------------------------  0

seq1  CTCTTATACATACATATACACATTCTCTCCCTCTCTCCTACTCTCTCTCT  400
                                                        
seq2  --------------------------------------------------  0

seq1  CTCTCTCACACACACACACACACATTCTCTCTCCCCCTCTTTCTTATACA  450
                                                        
seq2  --------------------------------------------------  0

seq1  CACAGGTATACACACTCATACATTCTCTCTCTCTCTCTCTCACACACACA  500
                                                        
seq2  --------------------------------------------------  0

seq1  CACACACACACACACATTCTCTCTCCCCCTCTCTCTTATACATACAGGTA  550
                                                        
seq2  --------------------------------------------------  0

seq1  TACACACTCATATATTCTCTCTCTCTCTCTCTCACACACACACACACACA  600
                                                        
seq2  --------------------------------------------------  0

seq1  CTCTCTCTCTCACACACATACTCTCTCTCACACACACACACACACACTCT  650
                                                        
seq2  --------------------------------------------------  0

seq1  CTCTCTCACACACACTCTCTCACACACACACTCTCTCTCTCTCTCTCTCT  700
                          ||||||||||                    
seq2  --------------------CACACACACA--------------------  10

seq1  CTCACACACACACACACACACACACACACACTCTGCTAGTGCA  743
        |||||||||||||||||||||||||||||||||  ||||||
seq2  --CACACACACACACACACACACACACACACTCTG--AGTGCA  49