BAC Information

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BAC

Clone NameB6Ng01-067E08
Chromosome18 (Build37)
Map Location 40,467,676 - 40,467,925
singlet/doubletsinglet
Overlap geneKctd16
Upstream geneArhgap26, Nr3c1, Pabpc2, LOC100041939, Yipf5
Downstream geneEG225416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067E08.bB6Ng01-067E08.g
ACCDH886212DH886213
length208245
definitionDH886212|Mus musculus domesticus DNA, BAC clone: B6Ng01-067E08, 5' end.DH886213|Mus musculus domesticus DNA, BAC clone: B6Ng01-067E08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
acagggaaatcatcactcagggacttcaggcagaaaactagccagtcagc
ctctggatagacaaggctcaacagttcagagaaccaggccatcgcaaata
gttcacagacctgcaaggaagacatgcagatccctgccccccaccccacc
cctcccccagccccacccaaacatagggagaaaaggcagtgtgggggagg
gggaggtg
tctgaactcactgtcctttcaggtccacatttgctctggctctggcaact
gactgaaccaaacaattaggctcatacctagaactttggaaatggtaatg
gagttgataacacaccctaacagaaagaggaatgctccactcactagtac
actttcactagaagcctcaccctgtcagcagtttaggaatttgtaaagcc
aatctggacaatatttaaatggtttggaatttctacttcatgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_40467676_40467925
seq2: B6Ng01-067E08.g_70_320 (reverse)

seq1  AAACATGAAGTAGAAATTCCAAATCATGTAAATATTGTCCAGATTGGCTT  50
      ||||||||||||||||||||||| ||| ||||||||||||||||||||||
seq2  AAACATGAAGTAGAAATTCCAAACCATTTAAATATTGTCCAGATTGGCTT  50

seq1  TACAAATTCCTAAACTGCTGGCAGGGCGAGGCTTCTAGTGAAAGTCTTCT  100
      |||||||||||||||||||| ||||| |||||||||||||||||| | ||
seq2  TACAAATTCCTAAACTGCTGACAGGGTGAGGCTTCTAGTGAAAGTGTACT  100

seq1  AGTGAGTGGAGCCTTCCTCTTTCTGTTAGAGTGTGTTTTCAACTCCATTA  150
      |||||||||||| |||||||||||||||| ||||||| ||||||||||||
seq2  AGTGAGTGGAGCATTCCTCTTTCTGTTAGGGTGTGTTATCAACTCCATTA  150

seq1  CCATTTTCGAAGATCTAGGTATGAGCCT-ATTGTTTGGTTCAGTCAGTTG  199
      |||||| | ||| ||||||||||||||| |||||||||||||||||||||
seq2  CCATTTCCAAAGTTCTAGGTATGAGCCTAATTGTTTGGTTCAGTCAGTTG  200

seq1  CCAGAGCCAGAGCAAAGGTGGACCTGAAAGGACAGTGAGTTCAGAGAATT  249
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CCAGAGCCAGAGCAAATGTGGACCTGAAAGGACAGTGAGTTCAGAGAATT  250

seq1  C  250
      |
seq2  C  251