BAC Information

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BAC

Clone NameB6Ng01-067O24
Chromosome18 (Build37)
Map Location 77,083,329 - 77,241,520
singlet/doubletdoublet
Overlap geneEG664805, LOC620139, Ier3ip1, Hdhd2, Katnal2
Upstream geneZbtb7c, 4833419G08Rik, LOC668184, Smad2, LOC668188, EG639576
Downstream genePias2, EG639653, St8sia5, Loxhd1, Rnf165, 8030462N17Rik, 4930465K10Rik, Ccdc5, Atp5a1, Pstpip2, 5430411K18Rik, Cd33l3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067O24.bB6Ng01-067O24.g
ACCDH886672DH886673
length7441,162
definitionDH886672|Mus musculus domesticus DNA, BAC clone: B6Ng01-067O24, 5' end.DH886673|Mus musculus domesticus DNA, BAC clone: B6Ng01-067O24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,083,329 - 77,084,072)(77,240,353 - 77,241,520)
sequence
gaattcttcgaaccaaagaaagccccagaattgggacaagaagccgctcc
aagacctttttcttaaccaaaactcccctctataaccctttccctgaatg
ccctttgctttggaaactccacgctggaacccatgagagccatgagttca
atcctatccaaactgtgaagcacctttgctgacacttcctttctagaacc
tgccaaggccaggggagggaaaggggctgtcttaagctctcgccattagg
aagaggccctatcttaacagtttgctgacacattgtcaggttatgattac
ctctgccacgctcttacccttcctgtccacaatgggatggtctcaagtgc
tgttttcaactggcatagtaacagttacagaatcccagtcttaaccactc
agaagagagagaaagggataaaggagatgcgtggctcctacctccagatc
tccctccacagccaacagtcttctcctgccaccatcttcatcccaggctc
aaaaaaaaaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaga
aagaaagaaagaaagaaagaaagaaaagagaagaaaagaaaagaaaagaa
aagaaaagaaaagaaaagaaaagaaaaaagaaaaaaacatggtctgattt
ctctgcaagagtgcaggctgtagtggcactgagagctaacaccaaaccta
gctctctctctctctctctctctctctctctctctctctctctc
gaattctttccccgtggaaaggactgctgctttacggccccccaggtaaa
cacgtctttctgttgtagtcctggaagtgtgtatgtgtgtgtgtctgtgt
gtctgtgtgtgctactctctctgtctgcctgaggatgggacaaagggtgc
ctgtgggacatagggggagcctgggcgctgcctggcggtgaggcagggag
caccgctcatgtttccgctcatgtgtccctaggcacagggaagactttgc
tggccaaagcggtggccaccgaatgcaaaaccaccttctttaacatttct
gcatccactattgtcagcaaatggagaggagattccgaaaaactggtccg
ggtaggaactcttaatattcttaaaagtcagtgttctagaataccagagt
acaaaattatgttagagcatatttgttttaaggtgatgtatatcttagat
tccgcttggattgtgactaccaaaagcctagggaatgggttgactattac
atgtggatatcagtcatatcgctgtcagcaaaacacagactcccttcttt
ggaattttatcaacagtccttttttgattcatgcagtttaggaatgaaag
ctagaataaaagtctctaaagtggcctagtgttttctccactcaagaaac
atttcattattaagtgtgtgcagtatatccacttaagggttagtgagagg
ccgctgctgggtgccagaccctacactatgtactctgtggaggaattgag
agacttaaaacttaattattctttcggatgttctgagcagcttctctgcc
atggtgctcaatgcctacgcagtcagtgttcttttccttggaaggctgtt
ttcatctttgcaatatctcactccttggcccacggccctataacattttg
ctgtatcttcctttcaccttaagagaacaactgtgtatgatgtacactca
ccatcaggcacagccttgccaaggagaacactgtgtatgatgtaccactc
accatcaaggacagccttggcaagaagaactactggtgattgatgtacac
ctcctcatcagggccagctttgccagaagatcttgtttggctggatatga
tcatccttaagtagtgtaaaaatttctttctggagaattttcctaatacg
caccctggaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_77083329_77084072
seq2: B6Ng01-067O24.b_49_792

seq1  GAATTCTTCGAACCAAAGAAAGCCCCAGAATTGGGACAAGAAGCCGCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCGAACCAAAGAAAGCCCCAGAATTGGGACAAGAAGCCGCTCC  50

seq1  AAGACCTTTTTCTTAACCAAAACTCCCCTCTATAACCCTTTCCCTGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTTTTTCTTAACCAAAACTCCCCTCTATAACCCTTTCCCTGAATG  100

seq1  CCCTTTGCTTTGGAAACTCCACGCTGGAACCCATGAGAGCCATGAGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTGCTTTGGAAACTCCACGCTGGAACCCATGAGAGCCATGAGTTCA  150

seq1  ATCCTATCCAAACTGTGAAGCACCTTTGCTGACACTTCCTTTCTAGAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTATCCAAACTGTGAAGCACCTTTGCTGACACTTCCTTTCTAGAACC  200

seq1  TGCCAAGGCCAGGGGAGGGAAAGGGGCTGTCTTAAGCTCTCGCCATTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGGCCAGGGGAGGGAAAGGGGCTGTCTTAAGCTCTCGCCATTAGG  250

seq1  AAGAGGCCCTATCTTAACAGTTTGCTGACACATTGTCAGGTTATGATTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGCCCTATCTTAACAGTTTGCTGACACATTGTCAGGTTATGATTAC  300

seq1  CTCTGCCACGCTCTTACCCTTCCTGTCCACAATGGGATGGTCTCAAGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCACGCTCTTACCCTTCCTGTCCACAATGGGATGGTCTCAAGTGC  350

seq1  TGTTTTCAACTGGCATAGTAACAGTTACAGAATCCCAGTCTTAACCACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCAACTGGCATAGTAACAGTTACAGAATCCCAGTCTTAACCACTC  400

seq1  AGAAGAGAGAGAAAGGGATAAAGGAGATGCGTGGCTCCTACCTCCAGATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAGAGAAAGGGATAAAGGAGATGCGTGGCTCCTACCTCCAGATC  450

seq1  TCCCTCCACAGCCAACAGTCTTCTCCTGCCACCATCTTCATCCCAGGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCACAGCCAACAGTCTTCTCCTGCCACCATCTTCATCCCAGGCTC  500

seq1  AAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  550

seq1  AAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAGAAAAGAAAAGAAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGAAAGAAAAGAGAAGAAAAGAAAAGAAAAGAA  600

seq1  AAGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAAAACATGGTCTGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGAAAAGAAAAGAAAAGAAAAAAGAAAAAAACATGGTCTGATTT  650

seq1  CTCTGCAAGAGTGCAGGCTGTAGTGGCACTGAGAGCTAACACCAAACCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAAGAGTGCAGGCTGTAGTGGCACTGAGAGCTAACACCAAACCTA  700

seq1  GCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  744
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  744

seq1: chr18_77240353_77241520
seq2: B6Ng01-067O24.g_70_1231 (reverse)

seq1  AATTCCAGGGTAGTATTTTGGGATAATTCTTTTCAGAAAGAATATTTTAC  50
      ||||||||||| |  | || ||| |||||  | |||||||||  ||||||
seq2  AATTCCAGGGT-GCGTATTAGGAAAATTC--TCCAGAAAGAAATTTTTAC  47

seq1  ATTTACTTAGGATTGATTACTTAT-CAGCCCAACAGGATC-TCTGGCAAG  98
      |  |||||| |  ||||  | ||| ||||| |||| |||| |||||||| 
seq2  A-CTACTTAAGGATGAT--CATATCCAGCCAAACAAGATCTTCTGGCAAA  94

seq1  GCTGTGCCTTGATGGTGAGGTGTACATCATACA-CAGTTGTTCTCTTTGG  147
      |||| ||| |||||  |||||||||||||  || |||| |||||  ||| 
seq2  GCTG-GCCCTGATGAGGAGGTGTACATCAATCACCAGTAGTTCTTCTTGC  143

seq1  CAAGGCTGTGCCTTGATGGTGAGGTGTACATCATACACAGTTGTTCTCTT  197
      ||||||||| |||||||||||||  ||||||||||||||| ||||||| |
seq2  CAAGGCTGT-CCTTGATGGTGAGTGGTACATCATACACAG-TGTTCTCCT  191

seq1  TGGCAAGGCTGTGCCTTGATGGTGAGGTGTACATCATACACAGTTGTTCT  247
      ||||||||||||||| ||||||||| ||||||||||||||||||||||||
seq2  TGGCAAGGCTGTGCC-TGATGGTGA-GTGTACATCATACACAGTTGTTCT  239

seq1  CTTAAGGTGAAAGGAAGATACAGCAAAATGTTATAGGGCCGTGGGCC-AG  296
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTTAAGGTGAAAGGAAGATACAGCAAAATGTTATAGGGCCGTGGGCCAAG  289

seq1  GAGTGAGATATTGCAAAGATGAAAACAGCCTTCCAAGG-AAAGAACACTG  345
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAGTGAGATATTGCAAAGATGAAAACAGCCTTCCAAGGAAAAGAACACTG  339

seq1  TACTGCGTAGGCATTGAGCACCATGGCAGAGAAGCTGCTCAGAACATCCG  395
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -ACTGCGTAGGCATTGAGCACCATGGCAGAGAAGCTGCTCAGAACATCCG  388

seq1  AAAGAATAATTAAGTTTTAAGTCTCTCAATTCCTCCACAGAGTACATAGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATAATTAAGTTTTAAGTCTCTCAATTCCTCCACAGAGTACATAGT  438

seq1  GTAGGGTCTGGCACCCAGCAGCGGCCTCTCACTAACCCTTAAGTGGATAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGTCTGGCACCCAGCAGCGGCCTCTCACTAACCCTTAAGTGGATAT  488

seq1  ACTGCACACACTTAATAATG-AATGTTTCTTGAGTGGAGAAAACACTAGG  544
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACTGCACACACTTAATAATGAAATGTTTCTTGAGTGGAGAAAACACTAGG  538

seq1  CCACTTTAGAGACTTTTATTCTAGCTTTCATTCCTAAACTGCATGAATCA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTAGAGACTTTTATTCTAGCTTTCATTCCTAAACTGCATGAATCA  588

seq1  AAAAAGGACTGTTGATAAAATTCCAAAGAAGGGAGTCTGTGTTTTGCTGA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGACTGTTGATAAAATTCCAAAGAAGGGAGTCTGTGTTTTGCTGA  638

seq1  CAGCGATATGACTGATATCCACATGTAATAGTCAACCCATTCCCTAGGCT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGATATGACTGATATCCACATGTAATAGTCAACCCATTCCCTAGGCT  688

seq1  TTTGGTAGTCACAATCCAAGCGGAATCTAAGATATACATCACCTTAAAAC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTAGTCACAATCCAAGCGGAATCTAAGATATACATCACCTTAAAAC  738

seq1  AAATATGCTCTAACATAATTTTGTACTCTGGTATTCTAGAACACTGACTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGCTCTAACATAATTTTGTACTCTGGTATTCTAGAACACTGACTT  788

seq1  TTAAGAATATTAAGAGTTCCTACCCGGACCAGTTTTTCGGAATCTCCTCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAATATTAAGAGTTCCTACCCGGACCAGTTTTTCGGAATCTCCTCT  838

seq1  CCATTTGCTGACAATAGTGGATGCAGAAATGTTAAAGAAGGTGGTTTTGC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGCTGACAATAGTGGATGCAGAAATGTTAAAGAAGGTGGTTTTGC  888

seq1  ATTCGGTGGCCACCGCTTTGGCCAGCAAAGTCTTCCCTGTGCCTAGGGAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGGTGGCCACCGCTTTGGCCAGCAAAGTCTTCCCTGTGCCTAGGGAC  938

seq1  ACATGAGCGGAAACATGAGCGGTGCTCCCTGCCTCACCGCCAGGCAGCGC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGCGGAAACATGAGCGGTGCTCCCTGCCTCACCGCCAGGCAGCGC  988

seq1  CCAGGCTCCCCCTATGTCCCACAGGCACCCTTTGTCCCATCCTCAGGCAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTCCCCCTATGTCCCACAGGCACCCTTTGTCCCATCCTCAGGCAG  1038

seq1  ACAGAGAGAGTAGCACACACAGACACACAGACACACACACATACACACTT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGAGAGTAGCACACACAGACACACAGACACACACACATACACACTT  1088

seq1  CCAGGACTACAACAGAAAGACGTGTTTACCTGGGGGGCCGTAAAGCAGCA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACTACAACAGAAAGACGTGTTTACCTGGGGGGCCGTAAAGCAGCA  1138

seq1  GTCCTTTCCACGGGGAAAGAATTC  1168
      ||||||||||||||||||||||||
seq2  GTCCTTTCCACGGGGAAAGAATTC  1162