BAC Information

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BAC

Clone NameB6Ng01-068L03
Chromosome18 (Build37)
Map Location 28,198,331 - 28,343,333
singlet/doubletdoublet
Overlap genenone
Upstream geneEG665977, EG665646
Downstream geneEG271505, EG625997, BC051408
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068L03.bB6Ng01-068L03.g
ACCDH887207DH887208
length910855
definitionDH887207|Mus musculus domesticus DNA, BAC clone: B6Ng01-068L03, 5' end.DH887208|Mus musculus domesticus DNA, BAC clone: B6Ng01-068L03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,198,331 - 28,199,215)(28,342,626 - 28,343,333)
sequence
gaattctttctgtgtaaacctgaggacttgagtccacattctaaaactta
tcaagttagagtcatgcacatgtagccccaggactggggagtagagggca
gtactaggaggattactagtctccagtccagctccaggctcagtgagaga
ccttgcctcaaagcaaggtaaaaggtgttagaccaggatgcactaaatcc
tcctttggcctctgcagatgtgagtgagtacagggccacatatacatgta
tgtagttacattacacatataaacactcccatccaattagcacgtgatgt
ctgaacaacttaccatgctcaagttcatattcatattgatgaaatgttag
atgatttaattagatggatgaacttttcattcacacttttattttatttt
gaagattatcctgtaaacataccatttttcctttacttttcctcattcca
aattcttgaatgtacccctccaaacttgccttcaagttcatggctcccct
gctttttctacttattgctattctgtgcatatgtgcctatatacatgcat
atcaattatattcctagatatagtcaatttattacttgtggtgttacctg
tttgtatgttttctttctttctctctcctttgttttgtttttcgagacag
ggtttctctgtgtagccctggctgtcctggaactcactgtgtagaccagg
ctggcctcgaactcagaaatccacctgcttctgcctcccaagtgctgaga
ttaaaggcgtgcaccaccatcgccccgctgtttgtatgttttcaaggcta
atcatttggtactagacaacctattgttgtttcttccttggacaggacta
tctcttctgtttccagcttttcttgagttgcatataatataatctaaaaa
acttctatcc
gaattcctaggcaatacacagtggtaaacaaagcaagcagaaattctttt
gtggaacaatcccctttctgattttaccttttattcttagcacttttatc
tgaaacttcaggcctgagcaaatatctcttagcagaaagtacaaagtcac
agagaacaaagcagtgcagctagcccatgcagatgcaaattttcatttga
aatatctgactatgttgtcttgtatagctgacatttatttttattgcttc
ttaatatttcatcacataaatatatcactcttgttcacccatttggtttt
acatagatatagcatctgtttccaatgaaaaaactccaagaattaaagat
gcttgaagaattgttctaaaaaaacagctggccctatgttgtgaggcagg
actcacctcctgggtcaaaagatggtcaggtcttcatccaccatggaaat
cactgtggagatttatcaaaaaactaaacattaaactgccatataactca
cttatacaactcataagtttatgttcaaaaagctgtaagacaacacacag
tttccatatttaaatattctgtatatttctacactatttgcaataaccag
aaaatgaaacacactgtgatatccatcagcagaagtatttataaaaaaag
gggcaaacacacacacacacacacacacacacacacacacacacacacat
acacacacaccacaccacaccacaaacatgcacacactgagagagttgtc
tttccactataaagttgaatagaattatgtcacctgaagaaatatggatg
ggcctagcatcataatgcaaggtgaaaattagataaaagtcaaagaaata
tacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_28198331_28199215
seq2: B6Ng01-068L03.b_47_932

seq1  GAATTCTTTCTGTGTAAACCTGAGGACTTGAGTCCACATTCTAAAACTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTGTGTAAACCTGAGGACTTGAGTCCACATTCTAAAACTTA  50

seq1  TCAAGTTAGAGTCATGCACATGTAGCCCCAGGACTGGGGAGTAGAGGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTAGAGTCATGCACATGTAGCCCCAGGACTGGGGAGTAGAGGGCA  100

seq1  GTACTAGGAGGATTACTAGTCTCCAGTCCAGCTCCAGGCTCAGTGAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAGGAGGATTACTAGTCTCCAGTCCAGCTCCAGGCTCAGTGAGAGA  150

seq1  CCTTGCCTCAAAGCAAGGTAAAAGGTGTTAGACCAGGATGCACTAAATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCCTCAAAGCAAGGTAAAAGGTGTTAGACCAGGATGCACTAAATCC  200

seq1  TCCTTTGGCCTCTGCAGATGTGAGTGAGTACAGGGCCACATATACATGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGGCCTCTGCAGATGTGAGTGAGTACAGGGCCACATATACATGTA  250

seq1  TGTAGTTACATTACACATATAAACACTCCCATCCAATTAGCACGTGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTACATTACACATATAAACACTCCCATCCAATTAGCACGTGATGT  300

seq1  CTGAACAACTTACCATGCTCAAGTTCATATTCATATTGATGAAATGTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACAACTTACCATGCTCAAGTTCATATTCATATTGATGAAATGTTAG  350

seq1  ATGATTTAATTAGATGGATGAACTTTTCATTCACACTTTTATTTTATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTAATTAGATGGATGAACTTTTCATTCACACTTTTATTTTATTTT  400

seq1  GAAGATTATCCTGTAAACATACCATTTTTCCTTTACTTTTCCTCATTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTATCCTGTAAACATACCATTTTTCCTTTACTTTTCCTCATTCCA  450

seq1  AATTCTTGAATGTACCCCTCCAAACTTGCCTTCAAGTTCATGGCTCCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTGAATGTACCCCTCCAAACTTGCCTTCAAGTTCATGGCTCCCCT  500

seq1  GCTTTTTCTACTTATTGCTATTCTGTGCATATGTGCCTATATACATGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTCTACTTATTGCTATTCTGTGCATATGTGCCTATATACATGCAT  550

seq1  ATCAATTATATTCCTAGATATAGTCAATTTATTACTTGTGGTGTTACCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTATATTCCTAGATATAGTCAATTTATTACTTGTGGTGTTACCTG  600

seq1  TTTGTATGTTTTCTTTCTTTCTCTCTCCTTTGTTTTGTTTTTCGAGACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATGTTTTCTTTCTTTCTCTCTCCTTTGTTTTGTTTTTCGAGACAG  650

seq1  GGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTGTGTAGACCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTGTGTAGACCAGG  700

seq1  CTGGCCTCGAACTCAGAAATCCACCTGCTTCTGCCTCCCAAGTGCTGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCGAACTCAGAAATCCACCTGCTTCTGCCTCCCAAGTGCTGAGA  750

seq1  TTAAAGGCGTGCACCACCATCGCCCCGCTGTTTGTATGTTTTCAAGGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGCGTGCACCACCATCGCCCCGCTGTTTGTATGTTTTCAAGGCTA  800

seq1  ATCATTTGGTACTAGACAACCTATTGTTGTTTCTTCCTTGGACAGGACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTGGTACTAGACAACCTATTGTTGTTTCTTCCTTGGACAGGACTA  850

seq1  TCTCTTCTGTTCCCAGC-TTTCTTGAGTTGCATATA  885
      ||||||||||| ||||| ||||||||||||||||||
seq2  TCTCTTCTGTTTCCAGCTTTTCTTGAGTTGCATATA  886

seq1: chr18_28342626_28343333
seq2: B6Ng01-068L03.g_70_777 (reverse)

seq1  GTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50

seq1  GTTTGCCCCTTTTTTTATAAATACTTCTGCTGATGGATATCACAGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCCCCTTTTTTTATAAATACTTCTGCTGATGGATATCACAGTGTGT  100

seq1  TTCATTTTCTGGTTATTGCAAATAGTGTAGAAATATACAGAATATTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTCTGGTTATTGCAAATAGTGTAGAAATATACAGAATATTTAAA  150

seq1  TATGGAAACTGTGTGTTGTCTTACAGCTTTTTGAACATAAACTTATGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAACTGTGTGTTGTCTTACAGCTTTTTGAACATAAACTTATGAGT  200

seq1  TGTATAAGTGAGTTATATGGCAGTTTAATGTTTAGTTTTTTGATAAATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAGTGAGTTATATGGCAGTTTAATGTTTAGTTTTTTGATAAATCT  250

seq1  CCACAGTGATTTCCATGGTGGATGAAGACCTGACCATCTTTTGACCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTGATTTCCATGGTGGATGAAGACCTGACCATCTTTTGACCCAGG  300

seq1  AGGTGAGTCCTGCCTCACAACATAGGGCCAGCTGTTTTTTTAGAACAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGTCCTGCCTCACAACATAGGGCCAGCTGTTTTTTTAGAACAATT  350

seq1  CTTCAAGCATCTTTAATTCTTGGAGTTTTTTCATTGGAAACAGATGCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGCATCTTTAATTCTTGGAGTTTTTTCATTGGAAACAGATGCTAT  400

seq1  ATCTATGTAAAACCAAATGGGTGAACAAGAGTGATATATTTATGTGATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGTAAAACCAAATGGGTGAACAAGAGTGATATATTTATGTGATGA  450

seq1  AATATTAAGAAGCAATAAAAATAAATGTCAGCTATACAAGACAACATAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAAGAAGCAATAAAAATAAATGTCAGCTATACAAGACAACATAGT  500

seq1  CAGATATTTCAAATGAAAATTTGCATCTGCATGGGCTAGCTGCACTGCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATTTCAAATGAAAATTTGCATCTGCATGGGCTAGCTGCACTGCTT  550

seq1  TGTTCTCTGTGACTTTGTACTTTCTGCTAAGAGATATTTGCTCAGGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCTGTGACTTTGTACTTTCTGCTAAGAGATATTTGCTCAGGCCTG  600

seq1  AAGTTTCAGATAAAAGTGCTAAGAATAAAAGGTAAAATCAGAAAGGGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCAGATAAAAGTGCTAAGAATAAAAGGTAAAATCAGAAAGGGGAT  650

seq1  TGTTCCACAAAAGAATTTCTGCTTGCTTTGTTTACCACTGTGTATTGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCACAAAAGAATTTCTGCTTGCTTTGTTTACCACTGTGTATTGCCT  700

seq1  AGGAATTC  708
      ||||||||
seq2  AGGAATTC  708