BAC Information

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BAC

Clone NameB6Ng01-070D07
Chromosome18 (Build37)
Map Location 58,799,345 - 58,933,021
singlet/doubletdoublet
Overlap geneIsoc1
Upstream gene1700011I03Rik, Slc12a2, 9330166H04Rik, Fbn2, Slc27a6
Downstream geneAdamts19, A730017C20Rik, 4833446K15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070D07.bB6Ng01-070D07.g
ACCDH888277DH888278
length1,0991,210
definitionDH888277|Mus musculus domesticus DNA, BAC clone: B6Ng01-070D07, 5' end.DH888278|Mus musculus domesticus DNA, BAC clone: B6Ng01-070D07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,799,345 - 58,800,451)(58,931,789 - 58,933,021)
sequence
gaattcttattcatggtacaaaggctgagctgcagagccagcctattata
aaaatctttatgtgtagttaatccgatttaaaatcatctgcatctagctt
acaaatggatgaggcttagatcatgggtattttatttgagtgtgacaatt
cctcggagttacccctaagctacttttctaactgctggcctggctacttc
cccagcagtgtaccccaaatacttgctgtttctcctggccatgtgatcat
ggtccatctcctttcatggtagcccctcttctctctgtgtcctttcttct
tctccctctacctgtgacccccaaccaggtaactgaaaccctgcctacct
ctattttctccagtaattggctgtagccatttttattcaaccaattcttt
taaattaaagagcaaggtttgtacaaaaaaaaaaaaagttggtatacatg
agaattcgctagccttgaggcaactcgatcttggtatacaaaatttagca
ttacaatacatagcaacagaccaaacctcaacacttatgaatccgctacg
ctttagattaggtctcaggaagcagtgtttcttaacctgtgggttttgaa
ccagtctgaggcttgatactccatggctcgcaccttccttgtcccaattt
cttctcatcctctttgctctttcgtgacctcatttccactctccaattct
gttctgttagttattttaattccatgtacatgtgggatcctgcagcattt
gtgagtacatgtctggctcttttcacccctccttaagccctcagtcctcc
tcatgttcactctaccaactcactctcccaccaacaacagtgcagaagga
ttcccctttctccatcctgtgaatgcttgctgtctatgacatagcttctc
attgttttagttggaattgttctgatggttaatggcactgtactgtacat
tatatttctgtgcatgtcatcttctgtggacatctgtattgatccttttg
ctgttttctgctatgagtgtatgatttattacatattgtaaattgtgata
ctgtggctaaaatcccttcccaggaagaagataagcatgggacctcgtc
gaattcatttaaataattaagaattattttaaaaatgatatattattgaa
aaaatcaaaactccatgatgcaggaattgaaaggcccttattctagagtt
aggagcagctaggagaattataatttttgaagccaggatattagtttaca
tatacccagttcatcttccctctggacattttatgcaactaaatagttga
gatacaagtgaaaaaaatcagagtgtggcaaatctactttgtgggaattg
aagcatcctttctagagtgataagggaggcttataaaccctcagacgttt
tcaaacattacaaatcacagacagtcctgaaacctacaggacttacgagg
tctctaccatgaaagcaattgcatttgccagggagaggagactgtgatgg
ctgagctgcctgcaagttgtatgtggagctccagcaaagcagctttccta
actgatcgcccagaatgggatgggctttttgatgatgcagctctctttga
gttgaccatgctctgatatataagccattacccatactccttcaggaaac
cccattaagctacctggatcactatggcagacatcaggggaattatttct
tatgtctgttcttagctctctatatggggtgaatagaaatgtattcacat
ctctctaggaaaaatcagaaaaagaaaattaagacaattacgttagataa
tattttctcatatgtagaaacatttttataatacatatcaaaattaaact
aaagcaacataagattgttttattatttactttacttgaggtagtgttgt
ggcttgaatgtgaagttactaagacacagcaataaactggaactctgaat
taaaatgggggtggcaggagccctggggtccatgggccttgccagtttaa
gtgtgctccctgcagcagagaggccagttcacctgggagctgattaaaag
gccacctctccagcctgtcctgaactactgaatccaaatgtcagtctaac
agtccttaagatttcttcaaggaataaatttgaaatcttctgtcaagaat
ctggaggagggaaagatatttgttactgtaggacttcaaagtcatcatgc
ttggaggaatataataaacattaattaaaataccgaatagggtctagtag
ccttcacaggtggtaaaagaaggtgtgaagaaaaagaaagagccaacttg
gtttggaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_58799345_58800451
seq2: B6Ng01-070D07.b_46_1144

seq1  GAATTCTTATTCATGGTACAAAGGCTGAGCTGCAGAGCCAGCCTATTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTCATGGTACAAAGGCTGAGCTGCAGAGCCAGCCTATTATA  50

seq1  AAAATCTTTATGTGTAGTTAATCCGATTTAAAATCATCTGCATCTAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTTATGTGTAGTTAATCCGATTTAAAATCATCTGCATCTAGCTT  100

seq1  ACAAATGGATGAGGCTTAGATCATGGGTATTTTATTTGAGTGTGACAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGGATGAGGCTTAGATCATGGGTATTTTATTTGAGTGTGACAATT  150

seq1  CCTCGGAGTTACCCCTAAGCTACTTTTCTAACTGCTGGCCTGGCTACTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGGAGTTACCCCTAAGCTACTTTTCTAACTGCTGGCCTGGCTACTTC  200

seq1  CCCAGCAGTGTACCCCAAATACTTGCTGTTTCTCCTGGCCATGTGATCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCAGTGTACCCCAAATACTTGCTGTTTCTCCTGGCCATGTGATCAT  250

seq1  GGTCCATCTCCTTTCATGGTAGCCCCTCTTCTCTCTGTGTCCTTTCTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCATCTCCTTTCATGGTAGCCCCTCTTCTCTCTGTGTCCTTTCTTCT  300

seq1  TCTCCCTCTACCTGTGACCCCCAACCAGGTAACTGAAACCCTGCCTACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTACCTGTGACCCCCAACCAGGTAACTGAAACCCTGCCTACCT  350

seq1  CTATTTTCTCCAGTAATTGGCTGTAGCCATTTTTATTCAACCAATTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTCTCCAGTAATTGGCTGTAGCCATTTTTATTCAACCAATTCTTT  400

seq1  TAAATTAAAGAGCAAGGTTTGTACAAAAAAAAAAAAAGTTGGTATACATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAAAGAGCAAGGTTTGTACAAAAAAAAAAAAAGTTGGTATACATG  450

seq1  AGAATTCGCTAGCCTTGAGGCAACTCGATCTTGGTATACAAAATTTAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCGCTAGCCTTGAGGCAACTCGATCTTGGTATACAAAATTTAGCA  500

seq1  TTACAATACATAGCAACAGACCAAACCTCAACACTTATGAATCCGCTACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAATACATAGCAACAGACCAAACCTCAACACTTATGAATCCGCTACG  550

seq1  CTTTAGATTAGGTCTCAGGAAGCAGTGTTTCTTAACCTGTGGGTTTTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGATTAGGTCTCAGGAAGCAGTGTTTCTTAACCTGTGGGTTTTGAA  600

seq1  CCAGTCTGAGGCTTGATACTCCATGGCTCGCACCTTCCTTGTCCCAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTGAGGCTTGATACTCCATGGCTCGCACCTTCCTTGTCCCAATTT  650

seq1  CTTCTCATCCTCTTTGCTCTTTCGTGACCTCATTTCCACTCTCCAATTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCATCCTCTTTGCTCTTTCGTGACCTCATTTCCACTCTCCAATTCT  700

seq1  GTTCTGTTAGTTATTTTAATTCCATGTACATGTGGGATCCTGCAGCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTAGTTATTTTAATTCCATGTACATGTGGGATCCTGCAGCATTT  750

seq1  GTGAGTACATGTCTGGCTCTTTTCACCCCTCCTTAAGCCCTCAGTCCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTACATGTCTGGCTCTTTTCACCCCTCCTTAAGCCCTCAGTCCTCC  800

seq1  TCATGTTCACTCTACCAACTCACTCTCCCACCAACAACAGTGCAGAAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTCACTCTACCAACTCACTCTCCCACCAACAACAGTGCAGAAGGA  850

seq1  TTCCCCTTTCTCCATCCTGTGAATGCTTGCTGTCTATGACATAGCTTCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTTTCTCCATCCTGTGAATGCTTGCTGTCTATGACATAGCTTCTC  900

seq1  ATTGTTTTAGTTGGAATTGTTCTGATGGTTAATGGCACTGTACTGTACAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTAGTTGGAATTGTTCTGATGGTTAATGGCACTGTACTGTACAT  950

seq1  TATATTTCTGTGCATGTCATCTTCTGTGGACAATCTGTATTGATCCTTTT  1000
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TATATTTCTGTGCATGTCATCTTCTGTGGAC-ATCTGTATTGATCCTTTT  999

seq1  GCTGTTTTCTTGCTATTGAGTTGTATGAATTTATTACATA-TGTAAATTG  1049
      ||||||||| ||||| |||| |||||| |||||||||||| |||||||||
seq2  GCTGTTTTC-TGCTA-TGAG-TGTATG-ATTTATTACATATTGTAAATTG  1045

seq1  TTGATTACTGTGGCTAAAATCCCTTCCCAGGGAAAGAGATAAGCAATGGG  1099
       ||| |||||||||||||||||||||||| ||||  |||||||| |||||
seq2  -TGA-TACTGTGGCTAAAATCCCTTCCCA-GGAAGAAGATAAGC-ATGGG  1091

seq1  ACCTCGTC  1107
      ||||||||
seq2  ACCTCGTC  1099

seq1: chr18_58931789_58933021
seq2: B6Ng01-070D07.g_66_1275 (reverse)

seq1  TGTTTCAAACCACATTTTGGCTCTTTCCCTTTTTCTTCACA-CTTCTTAT  49
      |||| |||||  ||  ||||||||||  ||||||||||||| |||||| |
seq2  TGTTCCAAAC--CAAGTTGGCTCTTT--CTTTTTCTTCACACCTTCTTTT  46

seq1  TCCCCACTCTTTGTGAAAGTGCTAACTAGACCCCTATTCGTTATTTTATT  99
       || |      ||||||   ||| |||||| ||||||||| ||||||| |
seq2  ACCAC-----CTGTGAA--GGCT-ACTAGA-CCCTATTCGGTATTTTAAT  87

seq1  ATATGTTTTTATTAATAATCCCTACAAGCATGATTGACTTTGAAGT-CTA  148
        |||  |||||||   || ||| ||||||||| |||||||||||| |||
seq2  TAATG--TTTATTA--TATTCCTCCAAGCATGA-TGACTTTGAAGTCCTA  132

seq1  CAGTTAACAATATCTTTTCCCTCCTCCAGA-TCTTGTACCAGAGATTTTC  197
      |||| |  |||||| ||||||||||||||| |||||   ||||   ||||
seq2  CAGTAACAAATATC-TTTCCCTCCTCCAGATTCTTG--ACAGAAGATTTC  179

seq1  AAATTTATTTCCCTGAAGAAATCCTTAAGGACCTTGTTAGACTGAACATT  247
      ||||||| |||| ||||||||| |||||||||  |||||||||| |||||
seq2  AAATTTA-TTCCTTGAAGAAAT-CTTAAGGAC--TGTTAGACTG-ACATT  224

seq1  TGGATTCAGTAGTTCAGGACAGGCTGGAGAGGTGGCCTTTTAATCAGCTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCAGTAGTTCAGGACAGGCTGGAGAGGTGGCCTTTTAATCAGCTC  274

seq1  CCAGGTGAACTGGCCTCTCCTGCTGCAGGGAGCACACTTAAACTGGCAAG  347
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CCAGGTGAACTGGCCTCT-CTGCTGCAGGGAGCACACTTAAACTGGCAAG  323

seq1  G-CCATGGACCCCAGGGCTCCTGCCACCCCCATTTTAATTCAGAGTTCCA  396
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATGGACCCCAGGGCTCCTGCCACCCCCATTTTAATTCAGAGTTCCA  373

seq1  GTTTATTGCTGTGTCTTAGTAACTTCACATTCAAGCCACAACACTACCTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTGCTGTGTCTTAGTAACTTCACATTCAAGCCACAACACTACCTC  423

seq1  AAGTAAAGTAAATAATAAAACAATCTTATGTTGCTTTAGTTTAATTTTGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAGTAAATAATAAAACAATCTTATGTTGCTTTAGTTTAATTTTGA  473

seq1  TATGTATTATAAAAATGTTTCTACATATGAGAAAATATTATCTAACGTAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATTATAAAAATGTTTCTACATATGAGAAAATATTATCTAACGTAA  523

seq1  TTGTCTTAATTTTCTTTTTCTGATTTTTCCTAGAGAGATGTGAATACATT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTAATTTTCTTTTTCTGATTTTTCCTAGAGAGATGTGAATACATT  573

seq1  TCTATTCACCCCATATAGAGAGCTAAGAACAGACATAAGAAATAATTCCC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCACCCCATATAGAGAGCTAAGAACAGACATAAGAAATAATTCCC  623

seq1  CTGATGTCTGCCATAGTGATCCAGGTAGCTTAATGGGGTTTCCTGAAGGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTCTGCCATAGTGATCCAGGTAGCTTAATGGGGTTTCCTGAAGGA  673

seq1  GTATGGGTAATGGCTTATATATCAGAGCATGGTCAACTCAAAGAGAGCTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGGGTAATGGCTTATATATCAGAGCATGGTCAACTCAAAGAGAGCTG  723

seq1  CATCATCAAAAAGCCCATCCCATTCTGGGCGATCAGTTAGGAAAGCTGCT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCAAAAAGCCCATCCCATTCTGGGCGATCAGTTAGGAAAGCTGCT  773

seq1  TTGCTGGAGCTCCACATACAACTTGCAGGCAGCTCAGCCATCACAGTCTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGAGCTCCACATACAACTTGCAGGCAGCTCAGCCATCACAGTCTC  823

seq1  CTCTCCCTGGCAAATGCAATTGCTTTCATGGTAGAGACCTCGTAAGTCCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCTGGCAAATGCAATTGCTTTCATGGTAGAGACCTCGTAAGTCCT  873

seq1  GTAGGTTTCAGGACTGTCTGTGATTTGTAATGTTTGAAAACGTCTGAGGG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTTTCAGGACTGTCTGTGATTTGTAATGTTTGAAAACGTCTGAGGG  923

seq1  TTTATAAGCCTCCCTTATCACTCTAGAAAGGATGCTTCAATTCCCACAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAGCCTCCCTTATCACTCTAGAAAGGATGCTTCAATTCCCACAAA  973

seq1  GTAGATTTGCCACACTCTGATTTTTTTCACTTGTATCTCAACTATTTAGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTTGCCACACTCTGATTTTTTTCACTTGTATCTCAACTATTTAGT  1023

seq1  TGCATAAAATGTCCAGAGGGAAGATGAACTGGGTATATGTAAACTAATAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAAAATGTCCAGAGGGAAGATGAACTGGGTATATGTAAACTAATAT  1073

seq1  CCTGGCTTCAAAAATTATAATTCTCCTAGCTGCTCCTAACTCTAGAATAA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCTTCAAAAATTATAATTCTCCTAGCTGCTCCTAACTCTAGAATAA  1123

seq1  GGGCCTTTCAATTCCTGCATCATGGAGTTTTGATTTTTTCAATAATATAT  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTTTCAATTCCTGCATCATGGAGTTTTGATTTTTTCAATAATATAT  1173

seq1  CATTTTTAAAATAATTCTTAATTATTTAAATGAATTC  1233
      |||||||||||||||||||||||||||||||||||||
seq2  CATTTTTAAAATAATTCTTAATTATTTAAATGAATTC  1210