BAC Information

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BAC

Clone NameB6Ng01-072F06
Chromosome18 (Build37)
Map Location 64,863,580 - 65,003,507
singlet/doubletdoublet
Overlap genenone
Upstream geneWdr7, LOC629436, LOC667773, St8sia3, LOC433193, Onecut2, LOC667783, LOC100043304, Fech, Nars, Atp8b1, LOC629480
Downstream geneNedd4l, Alpk2, LOC667816, Malt1, LOC638570, LOC100042820, Zfp532, 5330437I02Rik, Sec11c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072F06.bB6Ng01-072F06.g
ACCDH889776DH889777
length7551,090
definitionDH889776|Mus musculus domesticus DNA, BAC clone: B6Ng01-072F06, 5' end.DH889777|Mus musculus domesticus DNA, BAC clone: B6Ng01-072F06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,863,580 - 64,864,334)(65,002,399 - 65,003,507)
sequence
gaattcatacgacaggacctgtctacactgtgggcgactggactgtcact
gcttattgtaaagcaatttggcaattgatatgtccaaagcctttcaaatg
ttcataccagagaccatgagatggctcgttggtaaaagcatgtccaatgt
aggcctgactacctgaattcaatccctagggaccaacatggtggaaggag
agaactgacttccaaaagttgtcctctgatcactacacatgagccatggg
atgtgtacattcacacacacatcctgcatacacatagtacacaattataa
taaataaaatgttcttaccattcaatctgaacttccgtctaccattaact
aatgtgtggttatcttataccttttacaagcttatccaaagtgacatcta
ctatggcaaacttctttctttctttctttctttctttcattctttctttc
tttctttctttctttctttctttcttccttcccttctttcttgtttgttt
gtttgttttgttttgttttttcaagacagggtttctctgtgtatctctgg
ctggcctggaactcactctgtacactatgctggccaggaacttctaaatc
cacctgcctctgcctcctgagtgctgggattaaaggcatgctccaccacg
cccggctatatggcaaattacttaaggaacaactggaaaccctcatcact
gctgaccgaatatagttctgcatttcagtattgtgatgtttgagttgggt
catgg
gaattctgcatgtgagcatgctgtgagttgtgaccagagctcaaacagaa
gcagagtcccattccaacatgttttctcttctaatgtgatgtaaaagcat
ttttctaagatgtgggatctctattctgtttctattactatgggcaggag
ctaagaatgacagcccattgacgcctccactgaagttgagcctcgtagca
ctaagaacaagctctgcaaaagctgaactacctcagggcaaggtgtccca
gttcagtctccagaggagtgcacattctaattaccattttaacagtagtc
ctgggagaccttaggttgatgatccagtcaatgagcagtcagtcatgtct
taagcctaaccgaaagacactgtgaccatgactttcctagccactgccga
gtctctatgcttgaaaggtcatgcagcaataagggaaagcagagctttca
gttcagctcccaggtatttgagtctttcacacagccacttcagacaggtt
aaggagctgtcctaacttcgtttctttctgtgataaaataccccaacaaa
agtaacttaagggagaaagggcttgtttcagctcgcagtttgcagttatc
gttaatcacgatagattagaaagttacagtggcaggagcttgaggcagct
gggagcattgctttcataatcaagataaagatgcacaagtgtgttctgct
cactttctcttttctttttatcattttacatgttatcattgttttatcat
tttacagaccagcccagggaatggtatcactcacagtgagcaattttttc
cagccttgttaacccaattaagataatcctactggcatgcctagataccc
aggtgattctgcatctcctcaactgagaactgagattaaccatcacagga
ccgttgagggttccatcctagtctgcagagtccccagtgatgtcgacaga
ctgcagacagctatgctgtcagtagtgtccaaactagagatttatagaaa
aatttcagtgatggcttgcaacactacatgttacgtagttctttagtcaa
ttaattagatcagatgcacatcccccatatctgacttgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_64863580_64864334
seq2: B6Ng01-072F06.b_40_794

seq1  GAATTCAGACGACAGGACCTGTCTACACTGTGGGCGACTGGACTGTCACT  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACGACAGGACCTGTCTACACTGTGGGCGACTGGACTGTCACT  50

seq1  GCTTATTGGAAAGCAATTTGGCAATTGATATGTACAAAGCCTTTCAAATG  100
      |||||||| |||||||||||||||||||||||| ||||||||||||||||
seq2  GCTTATTGTAAAGCAATTTGGCAATTGATATGTCCAAAGCCTTTCAAATG  100

seq1  TTCATACCAGAGACCATGAGATGGCTCGTTGGTAAAAGCATGTCCAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATACCAGAGACCATGAGATGGCTCGTTGGTAAAAGCATGTCCAATGT  150

seq1  AGGCCTGACTACCTGAATTCAATCCCTAGGGACCAACATGGTGGAAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGACTACCTGAATTCAATCCCTAGGGACCAACATGGTGGAAGGAG  200

seq1  AGAACTGACTTCCAAAAGTTGTCCTCTGATCACTACACATGAGCCATGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTGACTTCCAAAAGTTGTCCTCTGATCACTACACATGAGCCATGGG  250

seq1  ATGTGTACATTCACACACACATCCTGCATACACATAGTACACAATTATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTACATTCACACACACATCCTGCATACACATAGTACACAATTATAA  300

seq1  TAAATAAAATGTTCTTACCATTCAATCTGAACTTCAGTCTACAATTAACT  350
      ||||||||||||||||||||||||||||||||||| |||||| |||||||
seq2  TAAATAAAATGTTCTTACCATTCAATCTGAACTTCCGTCTACCATTAACT  350

seq1  AATGTGTGGTTATCTTATACCTTTTACAAGCTTATCCAAAGTGACATCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTGGTTATCTTATACCTTTTACAAGCTTATCCAAAGTGACATCTA  400

seq1  CTATGGCAAACTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  450
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTATGGCAAACTTCTTTCTTTCTTTCTTTCTTTCTTTCATTCTTTCTTTC  450

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCCTTCTTTCTTGTTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCCTTCTTTCTTGTTTGTTT  500

seq1  GTTTGTTTTGTTTTGTTTTTTCGAGACAGGGTTTCTCTGTGTAGCTCTGG  550
      |||||||||||||||||||||| |||||||||||||||||||| ||||||
seq2  GTTTGTTTTGTTTTGTTTTTTCAAGACAGGGTTTCTCTGTGTATCTCTGG  550

seq1  CTGGCCTGGAACTCACTCTGTAGACTAGGCTGGCCTGGAACTCAGAAATC  600
      |||||||||||||||||||||| |||| ||||||| ||||||   |||||
seq2  CTGGCCTGGAACTCACTCTGTACACTATGCTGGCCAGGAACTTCTAAATC  600

seq1  CGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGCATGCGCCACCACG  650
      | ||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CACCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGCATGCTCCACCACG  650

seq1  CCCGGCTATATGGCAAATTTCTAAAGGAAGAACTGGAAACCCAGTTCACT  700
      ||||||||||||||||||| || |||||| ||||||||||||   |||||
seq2  CCCGGCTATATGGCAAATTACTTAAGGAACAACTGGAAACCCTCATCACT  700

seq1  GCTTACAGAATATAGTTCAACATTTCTTTATTGTGATGTTTGAGTTGGGT  750
      ||| || |||||||||||  ||||||  ||||||||||||||||||||||
seq2  GCTGACCGAATATAGTTCTGCATTTCAGTATTGTGATGTTTGAGTTGGGT  750

seq1  TATGG  755
       ||||
seq2  CATGG  755

seq1: chr18_65002399_65003507
seq2: B6Ng01-072F06.g_66_1155 (reverse)

seq1  AACAAGTCAAATTATGGGGGATGTTGCCAATACCTGATCTAATTACTTTG  50
      ||||||||| | ||||||||||| |||    | ||||||||||||  |||
seq2  AACAAGTCAGA-TATGGGGGATG-TGC----ATCTGATCTAATTA-ATTG  43

seq1  ACTATAAGAACTACCCTAACATGTAGTTGTTTCAAGCCATCACTTAAATT  100
      |||| |||||||| | |||||||||| |||| |||||||||||| |||||
seq2  ACTA-AAGAACTA-CGTAACATGTAG-TGTTGCAAGCCATCACTGAAATT  90

seq1  TTTCTATAAAATCTCTAGTTTGGACATGACTTGACAGGCATAGCTTGTCT  150
      ||||||| ||||||||||||||||||  || ||||| ||||||| |||||
seq2  TTTCTAT-AAATCTCTAGTTTGGACACTAC-TGACA-GCATAGC-TGTCT  136

seq1  GCAGTCTGTTGGACATCACCTGGGGACTCTGCAGACTAGGATTGGAACCC  200
      |||||||| | ||||||| |||||||||||||||||||||| ||||||||
seq2  GCAGTCTG-TCGACATCA-CTGGGGACTCTGCAGACTAGGA-TGGAACCC  183

seq1  TCAACGGTTCCTGTGATGGTTAATCTCAGTTCTCAGTTTGAGGAGATGCA  250
      ||||||| |||||||||||||||||||||||||||| |||||||||||||
seq2  TCAACGG-TCCTGTGATGGTTAATCTCAGTTCTCAG-TTGAGGAGATGCA  231

seq1  GAATCACCTGGGTATCTAGGCATGCCAGTAGGATTATCTTAATTGGGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCACCTGGGTATCTAGGCATGCCAGTAGGATTATCTTAATTGGGTTA  281

seq1  ACAAGGCTGGAAAAAATTGCTCACTGTGAGTGATACCATTCCCTGGGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCTGGAAAAAATTGCTCACTGTGAGTGATACCATTCCCTGGGCTG  331

seq1  GACTGTAAAATGATAAAACAATGATAACATGTAAAATGATAAAAAGAAAA  400
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTAAAATGATAAAACAATGATAACATGTAAAATGATAAAAAGAAAA  381

seq1  GAGAAAGTGAGCAGAACACACTTGTGCATCTTTATCTTGATTATGAAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGTGAGCAGAACACACTTGTGCATCTTTATCTTGATTATGAAAGC  431

seq1  AATGCTCCCAGCTGCCTCAAGCTCCTGCCACTGTAACTTTCTAATCTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCCCAGCTGCCTCAAGCTCCTGCCACTGTAACTTTCTAATCTATC  481

seq1  GTGATTAACGATAACTGCAAACTGCGAGCTGAAACAAGCCCTTTCTCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTAACGATAACTGCAAACTGCGAGCTGAAACAAGCCCTTTCTCCCT  531

seq1  TAAGTTACTTTTGTTGGGGTATTTTATCACAGAAAGAAACGAAGTTAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTACTTTTGTTGGGGTATTTTATCACAGAAAGAAACGAAGTTAGGA  581

seq1  CAGCTCCTTAACCTGTCTGAAGTGGCTGTGTGAAAGACTCAAATACCTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCTTAACCTGTCTGAAGTGGCTGTGTGAAAGACTCAAATACCTGG  631

seq1  GAGCTGAACTGAAAGCTCTGCTTTCCCTTATTGCTGCATGACCTTTCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGAACTGAAAGCTCTGCTTTCCCTTATTGCTGCATGACCTTTCAAG  681

seq1  CATAGAGACTCGGCAGTGGCTAGGAAAGTCATGGTCACAGTGTCTTTCGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGACTCGGCAGTGGCTAGGAAAGTCATGGTCACAGTGTCTTTCGG  731

seq1  TTAGGCTTAAGACATGACTGACTGCTCATTGACTGGATCATCAACCTAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTTAAGACATGACTGACTGCTCATTGACTGGATCATCAACCTAAG  781

seq1  GTCTCCCAGGACTACTGTTAAAATGGTAATTAGAATGTGCACTCCTCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCCAGGACTACTGTTAAAATGGTAATTAGAATGTGCACTCCTCTGG  831

seq1  AGACTGAACTGGGACACCTTGCCCTGAGGTAGTTCAGCTTTTGCAGAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGAACTGGGACACCTTGCCCTGAGGTAGTTCAGCTTTTGCAGAGCT  881

seq1  TGTTCTTAGTGCTACGAGGCTCAACTTCAGTGGAGGCGTCAATGGGCTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTAGTGCTACGAGGCTCAACTTCAGTGGAGGCGTCAATGGGCTGT  931

seq1  CATTCTTAGCTCCTGCCCATAGTAATAGAAACAGAATAGAGATCCCACAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTAGCTCCTGCCCATAGTAATAGAAACAGAATAGAGATCCCACAT  981

seq1  CTTAGAAAAATGCTTTTACATCACATTAGAAGAGAAAACATGTTGGAATG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAAAAATGCTTTTACATCACATTAGAAGAGAAAACATGTTGGAATG  1031

seq1  GGACTCTGCTTCTGTTTGAGCTCTGGTCACAACTCACAGCATGCTCACAT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTGCTTCTGTTTGAGCTCTGGTCACAACTCACAGCATGCTCACAT  1081

seq1  GCAGAATTC  1109
      |||||||||
seq2  GCAGAATTC  1090