BAC Information

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BAC

Clone NameB6Ng01-073G08
Chromosome18 (Build37)
Map Location 62,613,350 - 62,806,923
singlet/doubletdoublet
Overlap geneHtr4, Fbxo38, Spink10, EG408198
Upstream gene4933429F08Rik, Csnk1a1, Il17b, Pcyox1l, LOC100042730, Grpel2, Afap1l1, LOC100042738, Ablim3, Sh3tc2, Adrb2
Downstream gene2700046A07Rik, Apcdd1, Napg, 9430028L06Rik, 9030411M15Rik, LOC627792
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073G08.bB6Ng01-073G08.g
ACCDH890542DH890543
length9791,024
definitionDH890542|Mus musculus domesticus DNA, BAC clone: B6Ng01-073G08, 5' end.DH890543|Mus musculus domesticus DNA, BAC clone: B6Ng01-073G08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,806,381 - 62,806,923)(62,613,350 - 62,614,382)
sequence
gaattctggtttgtctctgcaaaataaaatacattatttataataaatgt
gtctttaggattcactgaataaatatctgaaacaatatttttcttttcat
ctctgattttattaattttggtcttctctattatcttttagatagttggc
taaatgtttgtcaatcttgttaatcttttcaaaggatcagcaaagaattg
attgcttatatttttgtttttttttaaatctgtttcattaattttatcca
gccctaagtcttgtctattgggggtagtagagtattaaatcacccactat
cattgtgtttgggtcaatttctggtttaagacctaataagattattttat
gaaatcaggtacttctttggtggataaatgtttagaattagaatatcatc
tcagtggatttttatttcaataagtatgaaatgtccactagcatatcttt
tcattagttttcgtttgtgatctattttttcagatattagaatagaatag
tctgtttatttcttcattccatttgcctggaataccttttcccattattt
tatgttaaaataatcatatctatcattgatggtaaagtggtttttattag
aggccacaaaacatggatcttattttttaatccaatttgtcagtatatgc
tttttaaaaaatatatatattacataatttcacatttcccctccctcaac
ctccccatgcacccccttgattgctctcaaattgatagctgcttcttttt
tttttaatttttattacatatacaaacacactcctaaatatgtaaacaca
acttgttcaatccctactgagggaacctcaatgttggctcaagacaccct
gtattagtcagggttctctagagtcacagaacttatggatagtctctata
tagtaaaggaatttattgatgacttacagtctgcagttcatttcccacaa
tggtcagtagtagctgtgaatggaggtcc
gaattctgactgcacattagacatacttgggagctttaaaaaactacctg
agagtaggtttcacatgtgcaagatgctagcaagatgatctggggggcag
gcagcaaaaatctaaagtttttaataagagttctaacattcagtagggtg
ggaaacgacttacgaactacagaaaccaggaggaatttttaatcttttat
tgatcaccaatcagctattatcctgcctccaaaccagtaaaatgaggagg
tggtattagttaatacttgaagatcaggctagatccacttcttaggtact
gagataatatgcatttaaactctcaggtctcaatggtacagttctgctca
ccaattggcatatgcatgttgttgtagctggggtttgctatagacagttc
atgggcagaggttaggaatgatgctaatcttctcagagcacacagggaag
ccccctacagaaagaactctatggcccttaaagtgctagatcatcctgaa
atagaaagttctttaaactttgcgatttgcaaaagagaaacttcttgtcc
ttgccaggagacagctggagagttcttgaataaccgctagaggtacagca
cctgtagtgttgacatttctcaacccatgcagtctcaagacaaggaaaac
gaaaccttgtggagagtgactgggatttcttctgggaagaatcctgcatg
tctgtggttaggtgttggcagccaccttgcagataagcttcctacaaggc
aggcactatgcacttgttcctttacaccatgttcttggcaaggacacagc
cctctcgatttagtcagagcagctgctcaggaagggattgcctcctaagc
acgctatgaaacccactgaaaactagagtctcgtgtaaatgtgtgcttag
cccacagcgtatgggataagtctcttgtccattgaattgatagagcttct
cttatgcagggactgaccaactagaatgtctctaagaaagcaataccgtg
atttttttctttagtaaatcactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_62806381_62806923
seq2: B6Ng01-073G08.b_46_588 (reverse)

seq1  GGGAAAAGGTATTCCAGGCAAATGGAATGAAGAAATAAACAGACTATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAGGTATTCCAGGCAAATGGAATGAAGAAATAAACAGACTATTCT  50

seq1  ATTCTAATATCTGAAAAAATAGATCACAAACGAAAACTAATGAAAAGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAATATCTGAAAAAATAGATCACAAACGAAAACTAATGAAAAGATA  100

seq1  TGCTAGTGGACATTTCATACTTATTGAAATAAAAATCCACTGAGATGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGTGGACATTTCATACTTATTGAAATAAAAATCCACTGAGATGATA  150

seq1  TTCTAATTCTAAACATTTATCCACCAAAGAAGTACCTGATTTCATAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAATTCTAAACATTTATCCACCAAAGAAGTACCTGATTTCATAAAAT  200

seq1  AATCTTATTAGGTCTTAAACCAGAAATTGACCCAAACACAATGATAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTATTAGGTCTTAAACCAGAAATTGACCCAAACACAATGATAGTGG  250

seq1  GTGATTTAATACTCTACTACCCCCAATAGACAAGACTTAGGGCTGGATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTAATACTCTACTACCCCCAATAGACAAGACTTAGGGCTGGATAA  300

seq1  AATTAATGAAACAGATTTAAAAAAAAACAAAAATATAAGCAATCAATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATGAAACAGATTTAAAAAAAAACAAAAATATAAGCAATCAATTCT  350

seq1  TTGCTGATCCTTTGAAAAGATTAACAAGATTGACAAACATTTAGCCAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGATCCTTTGAAAAGATTAACAAGATTGACAAACATTTAGCCAACT  400

seq1  ATCTAAAAGATAATAGAGAAGACCAAAATTAATAAAATCAGAGATGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAAGATAATAGAGAAGACCAAAATTAATAAAATCAGAGATGAAAA  450

seq1  GAAAAATATTGTTTCAGATATTTATTCAGTGAATCCTAAAGACACATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATATTGTTTCAGATATTTATTCAGTGAATCCTAAAGACACATTTA  500

seq1  TTATAAATAATGTATTTTATTTTGCAGAGACAAACCAGAATTC  543
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAATAATGTATTTTATTTTGCAGAGACAAACCAGAATTC  543

seq1: chr18_62613350_62614382
seq2: B6Ng01-073G08.g_70_1093

seq1  GAATTCTGACTGCACATTAGACATACTTGGGAGCTTTAAAAAACTACCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACTGCACATTAGACATACTTGGGAGCTTTAAAAAACTACCTG  50

seq1  AGAGTAGGTTTCACATGTGCAAGATGCTAGCAAGATGATCTGGGGGGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAGGTTTCACATGTGCAAGATGCTAGCAAGATGATCTGGGGGGCAG  100

seq1  GCAGCAAAAATCTAAAGTTTTTAATAAGAGTTCTAACATTCAGTAGGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAAAAATCTAAAGTTTTTAATAAGAGTTCTAACATTCAGTAGGGTG  150

seq1  GGAAACGACTTACGAACTACAGAAACCAGGAGGAATTTTTAATCTTTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACGACTTACGAACTACAGAAACCAGGAGGAATTTTTAATCTTTTAT  200

seq1  TGATCACCAATCAGCTATTATCCTGCCTCCAAACCAGTAAAATGAGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACCAATCAGCTATTATCCTGCCTCCAAACCAGTAAAATGAGGAGG  250

seq1  TGGTATTAGTTAATACTTGAAGATCAGGCTAGATCCACTTCTTAGGTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTAGTTAATACTTGAAGATCAGGCTAGATCCACTTCTTAGGTACT  300

seq1  GAGATAATATGCATTTAAACTCTCAGGTCTCAATGGTACAGTTCTGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAATATGCATTTAAACTCTCAGGTCTCAATGGTACAGTTCTGCTCA  350

seq1  CCAATTGGCATATGCATGTTGTTGTAGCTGGGGTTTGCTATAGACAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTGGCATATGCATGTTGTTGTAGCTGGGGTTTGCTATAGACAGTTC  400

seq1  ATGGGCAGAGGTTAGGAATGATGCTAATCTTCTCAGAGCACACAGGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCAGAGGTTAGGAATGATGCTAATCTTCTCAGAGCACACAGGGAAG  450

seq1  CCCCCTACAGAAAGAACTCTATGGCCCTTAAAGTGCTAGATCATCCTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTACAGAAAGAACTCTATGGCCCTTAAAGTGCTAGATCATCCTGAA  500

seq1  ATAGAAAGTTCTTTAAACTTTGCGATTTGCAAAAGAGAAACTTCTTGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAGTTCTTTAAACTTTGCGATTTGCAAAAGAGAAACTTCTTGTCC  550

seq1  TTGCCAGGAGACAGCTGGAGAGTTCTTGAATAACCGCTAGAGGTACAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGGAGACAGCTGGAGAGTTCTTGAATAACCGCTAGAGGTACAGCA  600

seq1  CCTGTAGTGTTGACATTTCTCAACCCATGCAGTCTCAAGACAAGGAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAGTGTTGACATTTCTCAACCCATGCAGTCTCAAGACAAGGAAAAC  650

seq1  GAAACCTTGTGGAGAGTGACTGGGATTTCTTCTGGGAAGAATCCTGCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTTGTGGAGAGTGACTGGGATTTCTTCTGGGAAGAATCCTGCATG  700

seq1  TCTGTGGTTAGGTGTTGGCAGCCACCTTGCAGATAAGCTTCCTACAAGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGTTAGGTGTTGGCAGCCACCTTGCAGATAAGCTTCCTACAAGGC  750

seq1  AGGCACTATGCACTTGTTCCTTTACACCATGTTCTTGGCAAGGACACAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTATGCACTTGTTCCTTTACACCATGTTCTTGGCAAGGACACAGC  800

seq1  CCTCTCGATTTAGTCAGAGCAGCTGCTCAGGAAGGGATTGCCTCCAAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CCTCTCGATTTAGTCAGAGCAGCTGCTCAGGAAGGGATTGCCTCCTAAGC  850

seq1  ACGCTATGAAACCCACTGAAAAACTAGAGTCTCGTGTAAATGTGTGCTTA  900
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACGCTATGAAACCCACTG-AAAACTAGAGTCTCGTGTAAATGTGTGCTTA  899

seq1  GCCCACAGCGGAATGGGATAGGTCTCTGGTCCATTGAATTGATAGAAGCT  950
      ||||||||| | |||||||| |||||| ||||||||||||||||| ||||
seq2  GCCCACAGC-GTATGGGATAAGTCTCTTGTCCATTGAATTGATAG-AGCT  947

seq1  TCATCTTATGCAGGGACTTGACCAACTAGAATGTCCTCTAAAGAAGGCAA  1000
      || |||||||||||||| |||||||||||||||| |||| ||||| || |
seq2  TC-TCTTATGCAGGGAC-TGACCAACTAGAATGT-CTCT-AAGAAAGC-A  992

seq1  ATACCGTGATTTTTTTCTATAGGATAATCACTG  1033
      |||||||||||||||||| ||| | ||||||||
seq2  ATACCGTGATTTTTTTCTTTAGTA-AATCACTG  1024