BAC Information

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BAC

Clone NameB6Ng01-075M13
Chromosome18 (Build37)
Map Location 71,748,078 - 71,868,097
singlet/doubletdoublet
Overlap geneDcc
Upstream geneMbd2, EG668032
Downstream geneLOC629684
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075M13.bB6Ng01-075M13.g
ACCDH892243DH892244
length9811,206
definitionDH892243|Mus musculus domesticus DNA, BAC clone: B6Ng01-075M13, 5' end.DH892244|Mus musculus domesticus DNA, BAC clone: B6Ng01-075M13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(71,867,118 - 71,868,097)(71,748,078 - 71,749,279)
sequence
gaattctctaacgtactgtattacacacactgtctcaaatttcatggcat
cagactgactttactgtccctgctaagagcctgactacttgtttttgagc
ctgaacacaatcaacttgtaaataatatttgataaagttgaaaacccttc
ctcatgaaatgcttgatcttttctgaggacctcactctctatttctttta
gtattattagcaagttgagcttctctcctatttccttgatggatggtgtg
tacttttctatggtgtaattcttaattcacttcttttcaaaattgagata
gttgtctctctgggttgtattttattgtgcatcttgtattgatatatttt
acaatatttatttttgtaccagaactttcctgaaagcttcactcataggt
actgttttgcataatgtgagtaggtgcatgtatgtgtgcctatgtgtctg
cttgtctgtctgtgggtttgtgtgtggtgtatgtatatgttatgaagcat
gtttatgtgtgcatacctgcatatgaaagggcatatggagaaggttggca
cttggtgtcttcatttattactacttccttatttttaatgtgtttattta
tttacttatttatttaatttactttaacttacctccacatcacactttcc
cctccctattcttctcccagttcctctatctctctgccctaaccccattg
cccctatccctatatcatcagagaaggaaaggcctcccatagatagtaat
cttcctttttatatcaaggtgcagtagaactaggtgcatcttctcctatt
gaacctagacaatgcatcccagtgagaggaaaggatcccaaaggcaggca
aggggacagtacttcagtttgcctagaatggctacctaatagttctggga
tttgcctatttcccattttctcctagccatgaggttacagatgtgcactt
ccatgctagatgtgattgggggggtgggggg
gaattcatgaacgagaaagggattgactaagtgtatgaataagtgagtga
aggcaaaataaatacatgtgtccatatttgaacaaaaatgtacaattcag
aagataaacaagacatttacatacaaaattatattagttacaatttggtc
aaagtgcatctattagcttattcaagggtttgaagctgagcaaggggaga
accatagtcccataaagatctaacaaatgcacttgactgttatgtttatt
attttcattactttagaagaagcaattatatatcattatcataaataagg
aaatcacctgatatcaggcaaataaacatttttctctgtcaaagaaaagt
tataatactttcaattatgggtatcattgaaaggtgattaacaagagaaa
agacacagaacagctgtacacaaacagacgtgaaccaataagattctcat
ttaaatattaattcgataatactttaacattccaaagcatagccaaaaac
ttctggttgagcaaaaatgccacagaaagacaagcagtaatgataaatcc
taactcattcataatatacctatgccgtttttttttaaatatactttggg
atatgtatttatataatcttggggaccaaaaataattaaaagaaacaaat
tgaaaactgataatgaatgtgaaaccaactgaacaatactcgacccatct
ccaggcttagatgatagtcattctagttatatatctctgtacatttaact
ttattggatcccctaagagatacgtgatcataccatgtttttctctctga
gtctcctttaggaggatttgacttttaaatgtagtgcatggaagagcaca
gtagtttataataacacattctacgctgtaaaccgcaaaagagcgtgttc
gaaatgtcacactaaagaaaggatagatgagttaagtgtagatacacagt
tagcatggaatcaccatgccgtactgggcgctacagtatatgcatgtctt
aagggttacatttgctggtgatgaagcaccacactgcaagcaagaagggt
tggtttgatttacaatctacatcattgttcattgtccaaggaagtcaggg
cagggaatcatatgcggaaggaacctgggagaaggagaactgtgcaaggt
cattggaaggaatgcctgctaactgattactcctctggaacctgctacac
catgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_71867118_71868097
seq2: B6Ng01-075M13.b_47_1027 (reverse)

seq1  CCCCCCA-CCCCCCAATCACATCTAGCATGGAAGTGCACATCTGTAACCT  49
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACCCCCCCAATCACATCTAGCATGGAAGTGCACATCTGTAACCT  50

seq1  CATGGCTAGGAGAAAATGGGAAATAGGCAAATCCCAGAACTATTAGGTAG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTAGGAGAAAATGGGAAATAGGCAAATCCCAGAACTATTAGGTAG  100

seq1  CCATTCTAGGCAAACTGAAGTACTGTCCCCTTGCCTGCCTTTGGGATCCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTAGGCAAACTGAAGTACTGTCCCCTTGCCTGCCTTTGGGATCCT  150

seq1  TTCCTCTCACTGGGATGCATTGTCTAGGTTCAATAGGAGAAGATGCACCT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTCACTGGGATGCATTGTCTAGGTTCAATAGGAGAAGATGCACCT  200

seq1  AGTTCTACTGCACCTTGATATAAAAAGGAAGATTACTATCTATGGGAGGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTACTGCACCTTGATATAAAAAGGAAGATTACTATCTATGGGAGGC  250

seq1  CTTTCCTTCTCTGATGATATAGGGATAGGGGCAATGGGGTTAGGGCAGAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTTCTCTGATGATATAGGGATAGGGGCAATGGGGTTAGGGCAGAG  300

seq1  AGATAGAGGAACTGGGAGAAGAATAGGGAGGGGAAAGTGTGATGTGGAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAGGAACTGGGAGAAGAATAGGGAGGGGAAAGTGTGATGTGGAGG  350

seq1  TAAGTTAAAGTAAATTAAATAAATAAGTAAATAAATAAACACATTAAAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTAAAGTAAATTAAATAAATAAGTAAATAAATAAACACATTAAAAA  400

seq1  TAAGGAAGTAGTAATAAATGAAGACACCAAGTGCCAACCTTCTCCATATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAGTAGTAATAAATGAAGACACCAAGTGCCAACCTTCTCCATATG  450

seq1  CCCTTTCATATGCAGGTATGCACACATAAACATGCTTCATAACATATACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCATATGCAGGTATGCACACATAAACATGCTTCATAACATATACA  500

seq1  TACACCACACACAAACCCACAGACAGACAAGCAGACACATAGGCACACAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCACACACAAACCCACAGACAGACAAGCAGACACATAGGCACACAT  550

seq1  ACATGCACCTACTCACATTATGCAAAACAGTACCTATGAGTGAAGCTTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCACCTACTCACATTATGCAAAACAGTACCTATGAGTGAAGCTTTC  600

seq1  AGGAAAGTTCTGGTACAAAAATAAATATTGTAAAATATATCAATACAAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGTTCTGGTACAAAAATAAATATTGTAAAATATATCAATACAAGA  650

seq1  TGCACAATAAAATACAACCCAGAGAGACAACTATCTCAATTTTGAAAAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAATAAAATACAACCCAGAGAGACAACTATCTCAATTTTGAAAAGA  700

seq1  AGTGAATTAAGAATTACACCATAGAAAAGTACACACCATCCATCAAGGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATTAAGAATTACACCATAGAAAAGTACACACCATCCATCAAGGAA  750

seq1  ATAGGAGAGAAGCTCAACTTGCTAATAATACTAAAAGAAATAGAGAGTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAGAGAAGCTCAACTTGCTAATAATACTAAAAGAAATAGAGAGTGA  800

seq1  GGTCCTCAGAAAAGATCAAGCATTTCATGAGGAAGGGTTTTCAACTTTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTCAGAAAAGATCAAGCATTTCATGAGGAAGGGTTTTCAACTTTAT  850

seq1  CAAATATTATTTACAAGTTGATTGTGTTCAGGCTCAAAAACAAGTAGTCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTATTTACAAGTTGATTGTGTTCAGGCTCAAAAACAAGTAGTCA  900

seq1  GGCTCTTAGCAGGGACAGTAAAGTCAGTCTGATGCCATGAAATTTGAGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTTAGCAGGGACAGTAAAGTCAGTCTGATGCCATGAAATTTGAGAC  950

seq1  AGTGTGTGTAATACAGTACGTTAGAGAATTC  980
      |||||||||||||||||||||||||||||||
seq2  AGTGTGTGTAATACAGTACGTTAGAGAATTC  981

seq1: chr18_71748078_71749279
seq2: B6Ng01-075M13.g_71_1276

seq1  GAATTCATGAACGAGAAAGGGATTGACTAAGTGTATGAATAAGTGAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAACGAGAAAGGGATTGACTAAGTGTATGAATAAGTGAGTGA  50

seq1  AGGCAAAATAAATACATGTGTCCATATTTGAACAAAAATGTACAATTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAATAAATACATGTGTCCATATTTGAACAAAAATGTACAATTCAG  100

seq1  AAGATAAACAAGACATTTACATACAAAATTATATTAGTTACAATTTGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAACAAGACATTTACATACAAAATTATATTAGTTACAATTTGGTC  150

seq1  AAAGTGCATCTATTAGCTTATTCAAGGGTTTGAAGCTGAGCAAGGGGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCATCTATTAGCTTATTCAAGGGTTTGAAGCTGAGCAAGGGGAGA  200

seq1  ACCATAGTCCCATAAAGATCTAACAAATGCACTTGACTGTTATGTTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAGTCCCATAAAGATCTAACAAATGCACTTGACTGTTATGTTTATT  250

seq1  ATTTTCATTACTTTAGAAGAAGCAATTATATATCATTATCATAAATAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCATTACTTTAGAAGAAGCAATTATATATCATTATCATAAATAAGG  300

seq1  AAATCACCTGATATCAGGCAAATAAACATTTTTCTCTGTCAAAGAAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACCTGATATCAGGCAAATAAACATTTTTCTCTGTCAAAGAAAAGT  350

seq1  TATAATACTTTCAATTATGGGTATCATTGAAAGGTGATTAACAAGAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATACTTTCAATTATGGGTATCATTGAAAGGTGATTAACAAGAGAAA  400

seq1  AGACACAGAACAGCTGTACACAAACAGACGTGAACCAATAAGATTCTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGAACAGCTGTACACAAACAGACGTGAACCAATAAGATTCTCAT  450

seq1  TTAAATATTAATTCGATAATACTTTAACATTCCAAAGCATAGCCAAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATTAATTCGATAATACTTTAACATTCCAAAGCATAGCCAAAAAC  500

seq1  TTCTGGTTGAGCAAAAATGCCACAGAAAGACAAGCAGTAATGATAAATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTTGAGCAAAAATGCCACAGAAAGACAAGCAGTAATGATAAATCC  550

seq1  TAACTCATTCATAATATACCTATGCCGTTTTTTTTTAAATATACTTTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCATTCATAATATACCTATGCCGTTTTTTTTTAAATATACTTTGGG  600

seq1  ATATGTATTTATATAATCTTGGGGACCAAAAATAATTAAAAGAAACAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTATTTATATAATCTTGGGGACCAAAAATAATTAAAAGAAACAAAT  650

seq1  TGAAAACTGATAATGAATGTGAAACCAACTGAACAATACTCGACCCATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACTGATAATGAATGTGAAACCAACTGAACAATACTCGACCCATCT  700

seq1  CCAGGCTTAGATGATAGTCATTCTAGTTATATATCTCTGTACATTTAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTTAGATGATAGTCATTCTAGTTATATATCTCTGTACATTTAACT  750

seq1  TTATTGGAT-CCCTAAGAGATACGTGATCATACCATGTTTTTCTCTCTGA  799
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGGATCCCCTAAGAGATACGTGATCATACCATGTTTTTCTCTCTGA  800

seq1  GTCTCCTTTAGGAGGATTTGACTTTTAAATGTAGTGCATGGAAGAGCACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTTTAGGAGGATTTGACTTTTAAATGTAGTGCATGGAAGAGCACA  850

seq1  GTAGTTTATAATAACACATTCTACGCTGTAAACCGCAAAAGAGCGTGTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTATAATAACACATTCTACGCTGTAAACCGCAAAAGAGCGTGTTC  900

seq1  GAAATGTCACACTAAAGAAAGGATAGATGAGTTAAGTGTTAGATACACAG  949
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAAATGTCACACTAAAGAAAGGATAGATGAGTTAAGTG-TAGATACACAG  949

seq1  TTAGCATGGAATCACCATGCCGTACTGGGCGCTACAGTATATGCATGTC-  998
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTAGCATGGAATCACCATGCCGTACTGGGCGCTACAGTATATGCATGTCT  999

seq1  TCAGGGTTACCATTGCT-GTGATGAAGCACCACAACTGCAAGCAAGAAGG  1047
      | ||||||||  ||||| ||||||||||||||| ||||||||||||||||
seq2  TAAGGGTTACATTTGCTGGTGATGAAGCACCAC-ACTGCAAGCAAGAAGG  1048

seq1  GTTTGTTTGATTTACAATTCTACATCATTGTTCATTGTCAAAGGAAGTCA  1097
      ||| ||||||||||||| ||||||||||||||||||||| ||||||||||
seq2  GTTGGTTTGATTTACAA-TCTACATCATTGTTCATTGTCCAAGGAAGTCA  1097

seq1  GGGCAGGGAATCAAATAGCGAAGGAACCT-GGAG-AGGAGAGCTGGTGCA  1145
      ||||||||||||| ||   |||||||||| |||| |||||| || |||| 
seq2  GGGCAGGGAATCATATGCGGAAGGAACCTGGGAGAAGGAGAACT-GTGC-  1145

seq1  AAGGTCAT--GGAGGGATG-CTGCTTACTGGATTACTCCTCTAG-ACCTG  1191
      ||||||||  | ||| ||| ||||| ||| |||||||||||| | |||||
seq2  AAGGTCATTGGAAGGAATGCCTGCTAACT-GATTACTCCTCTGGAACCTG  1194

seq1  CT-CAGCATGAT  1202
      || || ||||||
seq2  CTACACCATGAT  1206