BAC Information

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BAC

Clone NameB6Ng01-075O01
Chromosome18 (Build37)
Map Location 69,341,493 - 69,514,128
singlet/doubletdoublet
Overlap geneLOC100043380, EG225681, Tcf4
Upstream geneD18Ertd653e, 4933403F05Rik, Rnmt, Mc5r, Mc2r
Downstream geneCcdc68, Rab27b, 2310002L13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075O01.bB6Ng01-075O01.g
ACCDH892311DH892312
length1,2141,002
definitionDH892311|Mus musculus domesticus DNA, BAC clone: B6Ng01-075O01, 5' end.DH892312|Mus musculus domesticus DNA, BAC clone: B6Ng01-075O01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,512,911 - 69,514,128)(69,341,493 - 69,342,497)
sequence
gaattccattcaaaggcctaacaatgaactgcatgcttttttatatttaa
atataagacagctttacttgttcagatattaataggtcacactgggctac
tgcaatttcagatctgattattgacacaaaaataattgaaaatgtcttcc
ctgggacccaaatagccacacacagatttcccatggggaaaaaaatatat
tgaaaaagcacaacttttaaaatacccattctattttttctgtaaaagta
atgtgataatatgagaaccatatactagctcacatggaaatcaatcataa
cttaaaagggtaacttaatctggatattgaggcagaaaaatagtggatat
gatttgttacattaccttaaatgtttttaaaaaatgctttctactctaaa
gatcataaatagtatttcataccaggcctcaatattgtatttcatagcta
tataatcttgaaaaatatgagctgtctggctcttgatgcccttgtgtggg
ctggtatgtgtgcctttatgaatgtgtgcatatatatgtgtgtgaagggc
tataaagatttgtgtctaggcaggcctgcatttaaacctaatttcattac
tccttgccttgtgaacacatggcttaccaccgctgtgcctcagtttcctc
gtctatgaatcaggcacagtaaggtttgcattcacgtgtgttcttaggag
gactaaagcaagagtacatacatgacagaacacacagagctcatgaagct
gtcctctgactccagctcagcgctctgcccagcacccctaaaggagcacg
ggggtccccagggcaagaagagaagaaccagcaagctgaaccagagttcc
aaacctaagcaaaggcctcagagggcactcgagcacaggacagcactgat
gtccatcactgacacagcacatccatccttaaaccccactgtggctgaca
ggggacagagaagtacagcgttagttccaataaggagtctgcccaggcca
ccgacagcaaaacaaagctgattttgaatactacaaaggacacagtccct
cacctgaaatctaaattcctcagctacgaactggaggtctaggtggtttc
tcctggggctggccccaaaatacagagctctaatatactgccggagcttg
ctgtacttcgaactaattaagccactcctcttgttggtggaaagaaaaaa
acttttataaccac
gaattcaggtcttatcttaattctttaaaaccctgagggcttttgtggcg
ctgtgctaagcaaaagcacaagaggaaggccaagtggagacctagctggt
atgactattcttcaatccccttttctagaaatcaggttccctgtgccatg
aaacacagagggctctctcccgacctgactccctacctctcagagactag
tttcctttctaagcctttgggaccttagttcttccacaactacaattcac
tacctgtttgctcgcttgctcgctcacttacataactggattttgaagca
gggtcatactatacagtccggctgctcttcttcttgaattcaccatgtat
cccaggctggccatggacttggattccccttcagcctctcaggtgccaat
tacaggtatgtgccaccacagacagtcataaatctgctccgaataagccc
cacttctgtttctctcatgaaaatgtccttatctgattcccatgagcacc
tttgctgagagacaggatgatttaataacttctgccatgcatttgcaaaa
tacatgagccaaccattctttaactgaaagtttatgctctcttccccttg
actgtatatttttattcggtttctcttatgcagcctcatctgaaatatgc
gcctgcggtcttcaatcacgcagccatacttagttgcaacagtagtactc
aaactgaagatttgaaatagagtaaagtgagtgacacacaaggatttgca
atttatttttctgaattgaattatcatttacagattttaccctacaactg
aatcaactatatgatgcattataaattttggttttgaatttaatggatgc
tataaataaatattacatattggaaatatctcttggaataataagaaaag
acttttctcccaatgcgtttgtgcttctaacagtgactgctacttatggt
tagaaaacgcaggggactttgcaaggtggctcagccaaaagtgtgcattc
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_69512911_69514128
seq2: B6Ng01-075O01.b_47_1260 (reverse)

seq1  GTGGTTATAAAAGTTTTTTTCTTT-CACCAAC-AGA-GAGTTGCTTAATA  47
      |||||||||||||||||||||||| ||||||| ||| |||| ||||||| 
seq2  GTGGTTATAAAAGTTTTTTTCTTTCCACCAACAAGAGGAGTGGCTTAAT-  49

seq1  GATTTTGAAAAGTACAGCAGCATCAGACAGGTTATATTAGAGCCTCTGTA  97
       | || |  ||||||||||   || | |||  |||||||||| |||||||
seq2  TAGTTCG--AAGTACAGCAAGCTCCGGCAG--TATATTAGAG-CTCTGTA  94

seq1  TTTTGGGGCCAGCCCCA-GAGAAA-CACCTAGAACCTCCAGTTCGTAGCT  145
      ||||||||||||||||| |||||| ||||||| |||||||||||||||||
seq2  TTTTGGGGCCAGCCCCAGGAGAAACCACCTAG-ACCTCCAGTTCGTAGCT  143

seq1  GAGGAATTTAGATTTCAGGTGAGGGACTTGTGTCCTTTGTTAGTATTCAA  195
      ||||||||||||||||||||||||||| ||||||||||| ||||||||||
seq2  GAGGAATTTAGATTTCAGGTGAGGGAC-TGTGTCCTTTG-TAGTATTCAA  191

seq1  AATCAGCTTTGTTTTGCTGTCGGTGGCCTGGGCAGACTCCTTATTGGAAC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGCTTTGTTTTGCTGTCGGTGGCCTGGGCAGACTCCTTATTGGAAC  241

seq1  TAACGCTGTACTTCTCTGTCCCCTGTCAGCCACAGTGGGGTTTAAGGATG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGCTGTACTTCTCTGTCCCCTGTCAGCCACAGTGGGGTTTAAGGATG  291

seq1  GATGTGCTGTGTCAGTGATGGACATCAGTGCTGTCCTGTGCTCGAGTGCC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGCTGTGTCAGTGATGGACATCAGTGCTGTCCTGTGCTCGAGTGCC  341

seq1  CTCTGAGGCCTTTGCTTAGGTTTGGAACTCTGGTTCAGCTTGCTGGTTCT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGGCCTTTGCTTAGGTTTGGAACTCTGGTTCAGCTTGCTGGTTCT  391

seq1  TCTCTTCTTGCCCTGGGGACCCCCGTGCTCCTTTAGGGGTGCTGGGCAGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCTTGCCCTGGGGACCCCCGTGCTCCTTTAGGGGTGCTGGGCAGA  441

seq1  GCGCTGAGCTGGAGTCAGAGGACAGCTTCATGAGCTCTGTGTGTTCTGTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTGAGCTGGAGTCAGAGGACAGCTTCATGAGCTCTGTGTGTTCTGTC  491

seq1  ATGTATGTACTCTTGCTTTAGTCCTCCTAAGAACACACGTGAATGCAAAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTACTCTTGCTTTAGTCCTCCTAAGAACACACGTGAATGCAAAC  541

seq1  CTTACTGTGCCTGATTCATAGACGAGGAAACTGAGGCACAGCGGTGGTAA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTGTGCCTGATTCATAGACGAGGAAACTGAGGCACAGCGGTGGTAA  591

seq1  GCCATGTGTTCACAAGGCAAGGAGTAATGAAATTAGGTTTAAATGCAGGC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTGTTCACAAGGCAAGGAGTAATGAAATTAGGTTTAAATGCAGGC  641

seq1  CTGCCTAGACACAAATCTTTATAGCCCTTCACACACATATATATGCACAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTAGACACAAATCTTTATAGCCCTTCACACACATATATATGCACAC  691

seq1  ATTCATAAAGGCACACATACCAGCCCACACAAGGGCATCAAGAGCCAGAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAAAGGCACACATACCAGCCCACACAAGGGCATCAAGAGCCAGAC  741

seq1  AGCTCATATTTTTCAAGATTATATAGCTATGAAATACAATATTGAGGCCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATATTTTTCAAGATTATATAGCTATGAAATACAATATTGAGGCCT  791

seq1  GGTATGAAATACTATTTATGATCTTTAGAGTAGAAAGCATTTTTTAAAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGAAATACTATTTATGATCTTTAGAGTAGAAAGCATTTTTTAAAAA  841

seq1  CATTTAAGGTAATGTAACAAATCATATCCACTATTTTTCTGCCTCAATAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAGGTAATGTAACAAATCATATCCACTATTTTTCTGCCTCAATAT  891

seq1  CCAGATTAAGTTACCCTTTTAAGTTATGATTGATTTCCATGTGAGCTAGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTAAGTTACCCTTTTAAGTTATGATTGATTTCCATGTGAGCTAGT  941

seq1  ATATGGTTCTCATATTATCACATTACTTTTACAGAAAAAATAGAATGGGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGTTCTCATATTATCACATTACTTTTACAGAAAAAATAGAATGGGT  991

seq1  ATTTTAAAAGTTGTGCTTTTTCAATATATTTTTTTCCCCATGGGAAATCT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAAGTTGTGCTTTTTCAATATATTTTTTTCCCCATGGGAAATCT  1041

seq1  GTGTGTGGCTATTTGGGTCCCAGGGAAGACATTTTCAATTATTTTTGTGT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGGCTATTTGGGTCCCAGGGAAGACATTTTCAATTATTTTTGTGT  1091

seq1  CAATAATCAGATCTGAAATTGCAGTAGCCCAGTGTGACCTATTAATATCT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATCAGATCTGAAATTGCAGTAGCCCAGTGTGACCTATTAATATCT  1141

seq1  GAACAAGTAAAGCTGTCTTATATTTAAATATAAAAAAGCATGCAGTTCAT  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAGTAAAGCTGTCTTATATTTAAATATAAAAAAGCATGCAGTTCAT  1191

seq1  TGTTAGGCCTTTGAATGGAATTC  1218
      |||||||||||||||||||||||
seq2  TGTTAGGCCTTTGAATGGAATTC  1214

seq1: chr18_69341493_69342497
seq2: B6Ng01-075O01.g_69_1070

seq1  GAATTCAGGTCTTATCTTAATTCTTTAAAACCCTGAGGGCTTTTGTGGCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCTTATCTTAATTCTTTAAAACCCTGAGGGCTTTTGTGGCG  50

seq1  CTGTGCTAAGCAAAAGCACAAGAGGAAGGCCAAGTGGAGACCTAGCTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTAAGCAAAAGCACAAGAGGAAGGCCAAGTGGAGACCTAGCTGGT  100

seq1  ATGACTATTCTTCAATCCCCTTTTCTAGAAATCAGGTTCCCTGTGCCATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTATTCTTCAATCCCCTTTTCTAGAAATCAGGTTCCCTGTGCCATG  150

seq1  AAACACAGAGGGCTCTCTCCCGACCTGACTCCCTACCTCTCAGAGACTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAGAGGGCTCTCTCCCGACCTGACTCCCTACCTCTCAGAGACTAG  200

seq1  TTTCCTTTCTAAGCCTTTGGGACCTTAGTTCTTCCACAACTACAATTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTCTAAGCCTTTGGGACCTTAGTTCTTCCACAACTACAATTCAC  250

seq1  TACCTGTTTGCTCGCTTGCTCGCTCACTTACATAACTGGATTTTGAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTTTGCTCGCTTGCTCGCTCACTTACATAACTGGATTTTGAAGCA  300

seq1  GGGTCATACTATACAGTCCGGCTGCTCTTCTTCTTGAATTCACCATGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATACTATACAGTCCGGCTGCTCTTCTTCTTGAATTCACCATGTAT  350

seq1  CCCAGGCTGGCCATGGACTTGGATTCCCCTTCAGCCTCTCAGGTGCCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCTGGCCATGGACTTGGATTCCCCTTCAGCCTCTCAGGTGCCAAT  400

seq1  TACAGGTATGTGCCACCACAGACAGTCATAAATCTGCTCCGAATAAGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGTATGTGCCACCACAGACAGTCATAAATCTGCTCCGAATAAGCCC  450

seq1  CACTTCTGTTTCTCTCATGAAAATGTCCTTATCTGATTCCCATGAGCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTGTTTCTCTCATGAAAATGTCCTTATCTGATTCCCATGAGCACC  500

seq1  TTTGCTGAGAGACAGGATGATTTAATAACTTCTGCCATGCATTTGCAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGAGAGACAGGATGATTTAATAACTTCTGCCATGCATTTGCAAAA  550

seq1  TACATGAGCCAACCATTCTTTAACTGAAAGTTTATGCTCTCTTCCCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAGCCAACCATTCTTTAACTGAAAGTTTATGCTCTCTTCCCCTTG  600

seq1  ACTGTATATTTTTATTCGGTTTCTCTTATGCAGCCTCATCTGAAATATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATATTTTTATTCGGTTTCTCTTATGCAGCCTCATCTGAAATATGC  650

seq1  GCCTGCGGTCTTCAATCACGCAGCCATACTTAGTTGCAACAGTAGTACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCGGTCTTCAATCACGCAGCCATACTTAGTTGCAACAGTAGTACTC  700

seq1  AAACTGAAGATTTGAAATAGAGTAAAGTGAGTGACACACAAGGATTTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAGATTTGAAATAGAGTAAAGTGAGTGACACACAAGGATTTGCA  750

seq1  ATTTATTTTTCTGAATTGAATTATCATTTACAGATTTTACCCTACAACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTTTCTGAATTGAATTATCATTTACAGATTTTACCCTACAACTG  800

seq1  AATCAACTATATGATGCATTATAAATTTTGGTTTTGAATTTAATGGATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACTATATGATGCATTATAAATTTTGGTTTTGAATTTAATGGATGC  850

seq1  TATAAATAAATATTACATATTGGAAATATCTCTTGGAATAATAAGAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TATAAATAAATATTACATATTGGAAATATCTCTTGGAATAATAAG-AAAA  899

seq1  GACTTTTCTCCCAATGCGTTTGTGCTTCTAACAGTGACTGCTACTTATGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTCTCCCAATGCGTTTGTGCTTCTAACAGTGACTGCTACTTATGG  949

seq1  TTAGAAAAACGCAGGGGACTTTGCAAGGTGGCTCAGCCAAAAAGTGTGCA  1000
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  TTAG-AAAACGCAGGGGACTTTGCAAGGTGGCTCAGCC-AAAAGTGTGCA  997

seq1  TTCTC  1005
      |||||
seq2  TTCTC  1002