BAC Information

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BAC

Clone NameB6Ng01-076I18
Chromosome18 (Build37)
Map Location 52,593,686 - 52,594,496
singlet/doubletsinglet
Overlap genenone
Upstream geneEG240289, Ftmt
Downstream geneSrfbp1, Lox, Zfp474, 1700034E13Rik, Gykl1, Sncaip, A730036E13Rik, LOC667317, LOC100042430, Snx2, Gm1859, Snx24, Ppic
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076I18.bB6Ng01-076I18.g
ACCDH892786DH892787
length1,1761,006
definitionDH892786|Mus musculus domesticus DNA, BAC clone: B6Ng01-076I18, 5' end.DH892787|Mus musculus domesticus DNA, BAC clone: B6Ng01-076I18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggagtattgaatggctgagaatcacctaaagaaatg
ttcaacatccttagtcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaattcgggtgacagca
gatgctggggaggatatggagaaagaggaacactcccccattgctggtgg
gattgcaagctggtacgatcactctggaaatcagtttggcaattcctcag
aaaccactcctgggcatatacccagaagatgctacaacatgtaataagga
cacatgctccactatgttcatagcaaccttatttataatagccaaaagct
ggaaataacccagatgtctttcaacagaggactggatacagaaaacgtag
tacacaatgcagtactactcagctattaaaaacaatgacttcatgaaatt
cttagtcaaatggatggaactagaaaatatcctgagtgaggtaacccaat
cacaaaagaacacatatggtatgcactcactgacaagtggatattattcc
agaaattaggaatacccaaggtatgattcgcagatcacatgaagctcaag
aagaaggaagaccaaaatgtgggtgcttcagtccttcttagaaaagggaa
caaaatactcatgggaggaaatatggagacaaagtgtggagcagagactg
aaggaaaagccatccaaagactgactcacctggtgacccatcccatatac
agccaccaaacatagacactattgtggataccaagaagtgcttgctgaca
ggagcccaatatagtttgtctcctcagaggctctgccagagcctgacaaa
tacagaggtggatactcaaagccaaccattggactgagcacaagatcacc
aaaggggtccccaatggaagagttagaggaaggatgaatgagctgaaggg
tttgcaaccccatagcaagaacatatcaaccaccaactcccctagacctt
tcaggactaaaccaccaccaaggagtcaccatgggaaggacccatggctc
cagctgccatacttacccaaaggatgggccttgtagacatcaatgggaga
cagaccattggttcttgaagctgatgccccaattagggaatgcccaaacc
aaaattggtgtggtgcttaatagaca
gaattcacagaaacctgcctgtctctgcctcattaatgttggaatgaaaa
ggatatgccaccactacatggcttattgttggtttgtttttttttttttt
tttagttcctatatattctatagattactcctttttcaggttttctctcg
ttctttaagctgcattttctctatgctacttgttttctttgtttcacaaa
atctttttcatttccgtatgttgtctatcattgacactatttctcaggca
actcaaatctcatttagaaaggctatatctatgagtatcttgacactttc
tgtaatttttctctaattagtttcaaatcatcattatctttgatcaagtt
tgagttgacttttgtgcatggtgagaaatagggcccctagcttcattctt
ctatacttagatactcagtgttaccagaaccactgttgaaggagttacct
tctctccaggtgcatatttgacccatttgtcaaaaaccaggggtcagcag
ttgcataggtttatatctctaggtcttctattctactcattgatatatat
gtatattgatatatagcaaatttcagtatgctaatcttatatactgctat
tttgctaaaacatgtgggggtttttttctggtttatggtagagtctttgc
agtctcttatttatagaatcatatcatgtaaaaataaagatgtgtctttc
gtttatttaaaaatttaattcacagatgtctttagttagagcttccattg
ctgtgaagagacaccatgaccaaggcaactctttataaaggacaatgttt
aattaggactggctttcatgtgcagaagttcagtctattatcatcaaggc
aggaagcatagtagcatccaggcagacatggtgctgaagaagagctgact
gtcctgcatcttgttttactgcagtcaagagaaactgactgtctcccaag
cagctaggagaaaggctcaaagcccatcctccaagtgaaaaaagttcctt
caacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_52593686_52594496
seq2: B6Ng01-076I18.g_264_1074

seq1  ACAAAATCTTTTTCATTTCCGTATGTTGTCTATCATTGACACTATTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATCTTTTTCATTTCCGTATGTTGTCTATCATTGACACTATTTCTC  50

seq1  AGGCAACTCAAATCTCATTTAGAAAGGCTATATCTATGAGTATCTTGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACTCAAATCTCATTTAGAAAGGCTATATCTATGAGTATCTTGACA  100

seq1  CTTTCTGTAATTTTTCTCTAATTAGTTTCAAATCATCATTATCTTTGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTAATTTTTCTCTAATTAGTTTCAAATCATCATTATCTTTGATC  150

seq1  AAGTTTGAGTTGACTTTTGTGCATGGTGAGAAATAGGGCCCCTAGCTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTGAGTTGACTTTTGTGCATGGTGAGAAATAGGGCCCCTAGCTTCA  200

seq1  TTCTTCTATACTTAGATACTCAGTGTTACCAGAACCACTGTTGAAGGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTATACTTAGATACTCAGTGTTACCAGAACCACTGTTGAAGGAGT  250

seq1  TACCTTCTCTCCAGGTGCATATTTGACCCATTTGTCAAAAACCAGGGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTCTCTCCAGGTGCATATTTGACCCATTTGTCAAAAACCAGGGGTC  300

seq1  AGCAGTTGCATAGGTTTATATCTCTAGGTCTTCTATTCTACTCATTGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTGCATAGGTTTATATCTCTAGGTCTTCTATTCTACTCATTGATA  350

seq1  TATATGTATATTGATATATAGCAAATTTCAGTATGCTAATCTTATATACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTATATTGATATATAGCAAATTTCAGTATGCTAATCTTATATACT  400

seq1  GCTATTTTGCTAAAACATGTGGGGGTTTTTTTCTGGTTTATGGTAGAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTTGCTAAAACATGTGGGGGTTTTTTTCTGGTTTATGGTAGAGTC  450

seq1  TTTGCAGTCTCTTATTTATAGAATCATATCATGTAAAAATAAAGATGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGTCTCTTATTTATAGAATCATATCATGTAAAAATAAAGATGTGT  500

seq1  CTTTCGTTTATTTAAAAATTTAATTCACAGATGTC-TTAGTTAGAGCTTC  549
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CTTTCGTTTATTTAAAAATTTAATTCACAGATGTCTTTAGTTAGAGCTTC  550

seq1  CATTGCTGTGAAGAGACACCATGACCAAGGCAACTC-TTATAAAGGACAA  598
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CATTGCTGTGAAGAGACACCATGACCAAGGCAACTCTTTATAAAGGACAA  600

seq1  TGTTTAATTAGGACTGGCTTTCAGGTGCAGAAGTTCAGTCCATTATCATC  648
      ||||||||||||||||||||||| |||||||||||||||| |||||||||
seq2  TGTTTAATTAGGACTGGCTTTCATGTGCAGAAGTTCAGTCTATTATCATC  650

seq1  AAGGCAGGAAGCATAGTAGCATCCAGGCAGACATGGTGCTGAAGAAGGAG  698
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAGGCAGGAAGCATAGTAGCATCCAGGCAGACATGGTGCTGAAGAA-GAG  699

seq1  CTGACTGTCCTGCATCTTGATTTAACTGCAGTCAAGAGAAACTGACTGTC  748
      ||||||||||||||||||| ||| ||||||||||||||||||||||||||
seq2  CTGACTGTCCTGCATCTTG-TTTTACTGCAGTCAAGAGAAACTGACTGTC  748

seq1  TCCCAAGCAGCTAGGAGGAAGGTCTCAAAGCCCATCGCCACAGTG-AAAC  797
      ||||||||||||||||| |||| |||||||||||||  |  |||| ||| 
seq2  TCCCAAGCAGCTAGGAGAAAGG-CTCAAAGCCCATCCTCCAAGTGAAAAA  797

seq1  AGTTCCTTCAACAA  811
      ||||||||||||||
seq2  AGTTCCTTCAACAA  811