BAC Information

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BAC

Clone NameB6Ng01-076L20
Chromosome18 (Build37)
Map Location 29,180,546 - 29,181,466
singlet/doubletsinglet
Overlap genenone
Upstream geneEG271505, EG625997, BC051408
Downstream geneLOC100040930, 4930578E11Rik, LOC666073
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076L20.bB6Ng01-076L20.g
ACCDH892916DH892917
length1,191990
definitionDH892916|Mus musculus domesticus DNA, BAC clone: B6Ng01-076L20, 5' end.DH892917|Mus musculus domesticus DNA, BAC clone: B6Ng01-076L20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagttcctcctgcaacaagcctgcctggagattgctgtgttcc
cacctctatgataatggactgagcttctgaacctgtaagccagctccagt
taaatgctgcctaagaattttcttggtcatgttcacagcagtaaatccct
aagacagaagttggtaccaggaatgggggtatttctgtaatagacctaac
catgtttttgtttggaagaatgtttatttggggactttggatttggaaag
cagtggaatgctttaagcagggcttaatggactatcctagtagtaatatg
gaagactttgttgctaaggtttatttgaactgtggaagcttggctctaga
ggtttcaaaggagaacaattttaatatatggcttggagactgttcttgtg
atattttgttaaacaatgtgactgccttttccccttgtctgaagagtcta
ctcaaggctaaagtttatattaattgcattgataaaataagtctcaaaat
cacccagcagttctctgtttaagtctcatgaagaacattttgaataagca
tagaaaaaaaaatagaaaatataaggtcaaatattaaagaggtatcagaa
aataaaatggagctaaatcctgtgttcaaagatattaaattcagttaaag
gaatggtgaccttggggcaggatctcacccagctaagtttaggtccaggc
atggtagtacaagcctttaattccaggaggcaaaggcaaacagatctctg
agttcaactccagcctaggatagaacaagttctacatgaagaaaagctta
aattcaggcatggtggtacacacctttaatcccttcgtttagtagacaaa
gccagcagaccacttacgttcagggtcaatctagagagcaagttccagaa
cagccaagtttaagtagtgagggagttagaaaacagatagctggtaatag
aataaggtaagttatattccagccccagcaagcagcagacttggcagcta
aggtcatgtggctctggccttagagttcagaatagaaggactactgggat
aatgatgctgttagcttggagctaaaaattacagtggattagagaggagc
agcatcactgaaggtgaaatctggaaagtgttttctggagagacaagaaa
gctttgttcccgagaaaaggccaagttatactggtgagctg
gaattctctacagctatggtacaagacccatacatgattagattcaacaa
tatgcagcagcattccatccatgggatggattcctcccctctctgagaga
ccattgactgctaactgttgtagccctgtgaagcatcattttcttcagtg
gtgactgttgctcctctaaataacctcctacccacactctggcaagaaat
tgttaattaaaggcagtgtattatttaaaaagtgaagacataaataaagc
agaaaacttgttgggaaaagggatggggacagccagagatggggtggaag
ttgggaatcctgaattcctagtccttgaatggacttctttctaccataag
atttaattccagaacccaaagcttgaggaagaaccgcaacactagatcat
ggtagctactgcaacttaaaagttttctgagttctttccatcttctggct
attataaataaggctactatgaacatagtggagcatgtgtccttcttatc
ggatgcccctcaacagaggaatggatacaaaaaatgtggtacatttacac
aatggagtactactcagctattaaaaagaatgaatttatgaaattcctag
gcaaatggatggacctggagggcatcatcctgagtgaagtaacacaatca
caaaagaaatcaaatgatatgtgctcactgataagtggatattagcccag
aaacttagtatacccgagatataagatacaatttgcaaaacacatgaaac
tgaagaagaacgaagaccaaagtgtggacactttgccccttcttagaatt
ggaaacaatcacccatggaaagagttacagagacaaagtttggagctgag
acaaaaggatggaccatctagagactgccatatccagagatccatcccat
aattagtcttcaaatgatgacaccattgcatacactagcaagattttgct
gaaaagacccttgatatagctgtctcttgtgagactaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_29180546_29181466
seq2: B6Ng01-076L20.g_70_990

seq1  GAATTCTCTACAGCTATGGTACAAGACCCATACATGATTAGATTCAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTACAGCTATGGTACAAGACCCATACATGATTAGATTCAACAA  50

seq1  TATGCAGCAGCATTCCATCCATGGGATGGATTCCTCCCCTCTCTGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGCAGCATTCCATCCATGGGATGGATTCCTCCCCTCTCTGAGAGA  100

seq1  CCATTGACTGCTAACTGTTGTAGCCCTGTGAAGCATCATTTTCTTCAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGACTGCTAACTGTTGTAGCCCTGTGAAGCATCATTTTCTTCAGTG  150

seq1  GTGACTGTTGCTCCTCTAAATAACCTCCTACCCACACTCTGGCAAGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGTTGCTCCTCTAAATAACCTCCTACCCACACTCTGGCAAGAAAT  200

seq1  TGTTAATTAAAGGCAGTGTATTATTTAAAAAGTGAAGACATAAATAAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATTAAAGGCAGTGTATTATTTAAAAAGTGAAGACATAAATAAAGC  250

seq1  AGAAAACTTGTTGGGAAAAGGGATGGGGACAGCCAGAGATGGGGTGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACTTGTTGGGAAAAGGGATGGGGACAGCCAGAGATGGGGTGGAAG  300

seq1  TTGGGAATCCTGAATTCCTAGTCCTTGAATGGACTTCTTTCTACCATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAATCCTGAATTCCTAGTCCTTGAATGGACTTCTTTCTACCATAAG  350

seq1  ATTTAATTCCAGAACCCAAAGCTTGAGGAAGAACCGCAACACTAGATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTCCAGAACCCAAAGCTTGAGGAAGAACCGCAACACTAGATCAT  400

seq1  GGTAGCTACTGCAACTTAAAAGTTTTCTGAGTTCTTTCCATCTTCTGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCTACTGCAACTTAAAAGTTTTCTGAGTTCTTTCCATCTTCTGGCT  450

seq1  ATTATAAATAAGGCTACTATGAACATAGTGGAGCATGTGTCCTTCTTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAAATAAGGCTACTATGAACATAGTGGAGCATGTGTCCTTCTTATC  500

seq1  GGATGCCCCTCAACAGAGGAATGGATACAAAAAATGTGGTACATTTACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCCCTCAACAGAGGAATGGATACAAAAAATGTGGTACATTTACAC  550

seq1  AATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAG  600

seq1  GCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAAGTAACACAATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAAGTAACACAATCA  650

seq1  CAAAAGAAATCAAATGATATGTGCTCACTGATAAGTGGATATTAGCCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAAATCAAATGATATGTGCTCACTGATAAGTGGATATTAGCCCAG  700

seq1  AAACTTAGTATACCCGAGATATAAGATACAATTTGCAAAACACATGAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAGTATACCCGAGATATAAGATACAATTTGCAAAACACATGAAAC  750

seq1  TGAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCCCTTCTTAGAATT  800

seq1  GGAAACAATCACCCATGGAAAGAGTTACAGAGACAAAGTTTGGAGCTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAATCACCCATGGAAAGAGTTACAGAGACAAAGTTTGGAGCTGAG  850

seq1  ACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGAGATCCATCCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGAGATCCATCCCAT  900

seq1  AATTAGTCTTCAAATGATGAC  921
      |||||||||||||||||||||
seq2  AATTAGTCTTCAAATGATGAC  921