BAC Information

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BAC

Clone NameB6Ng01-077C08
Chromosome18 (Build37)
Map Location 13,474,811 - 13,475,532
singlet/doubletsinglet
Overlap genenone
Upstream geneLama3, 2810439F02Rik, Cabyr, LOC665356, Osbpl1a, LOC435556, Impact, Hrh4, EG383354
Downstream geneLOC665379, LOC100040358, Zfp521, LOC100040094, LOC100040103, LOC100040391
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077C08.bB6Ng01-077C08.g
ACCDH893199DH893200
length242722
definitionDH893199|Mus musculus domesticus DNA, BAC clone: B6Ng01-077C08, 5' end.DH893200|Mus musculus domesticus DNA, BAC clone: B6Ng01-077C08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaccacataaagaaagaaaaccatatatacggtgtgtgtgggggg
ggggggcagtggggacatcagtcaaaaaaacattaagacctacccaggat
acagctgtcctcagtggctgtagagaatagtgtaatgtgagtccagccta
gatatatccttggtgatatacttggggttctgtacttcctcaaattctaa
gttttacattcatttacaagatttgtgggacaccatgtgggt
gaattcaagttgccagcaaggctggactcaaacaagtttggctataaaag
ttactgagtattcacggtttatagctccttcccatgaggaggaaggacag
acatctgcaatctaagagcaaagaaatagatatcaaactcccattgccat
cactgcttatccagcaagtgaagacctcccatttagatcccagcatggct
gggcttgggtggtgatggttttataactgcttgaagagacaggtgcctgt
caaaggctaatgatgtcaactgctcagtgttcaagggtagagaagaacct
tgggtctacccattgctcaaggatttattccctagccagaggagagtttg
aattgtgactatcatgatctgcgtttcccaccaagacagagaagtatgtc
atcaacctgatctgtactactcagggtcaagtccttaagtggctgccatg
ctatagcttagttctaagcctgagttatcttcatagtgatttttagaaac
attagggtttgtatccatgaccaagtgaggtggcttctcacctcagtcag
tgcaaatccaggagaagctgagagctaacaaagaggagaaaggttcattg
cctataacagataagggagacacaagagttatttccagggcagtagcctt
atgaattgaggaagcaatagtcttggttggatagtctacctattcataca
ggaaatcattgtggggggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_13474811_13475532
seq2: B6Ng01-077C08.g_71_792

seq1  GAATTCAAGTTGCCAGCAAGGCTGGACTCAAACAAGTTTGGCTATAAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTTGCCAGCAAGGCTGGACTCAAACAAGTTTGGCTATAAAAG  50

seq1  TTACTGAGTATTCACGGTTTATAGCTCCTTCCCATGAGGAGGAAGGACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAGTATTCACGGTTTATAGCTCCTTCCCATGAGGAGGAAGGACAG  100

seq1  ACATCTGCAATCTAAGAGCAAAGAAATAGATATCAAACTCCCATTGCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGCAATCTAAGAGCAAAGAAATAGATATCAAACTCCCATTGCCAT  150

seq1  CACTGCTTATCCAGCAAGTGAAGACCTCCCATTTAGATCCCAGCATGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTTATCCAGCAAGTGAAGACCTCCCATTTAGATCCCAGCATGGCT  200

seq1  GGGCTTGGGTGGTGATGGTTTTATAACTGCTTGAAGAGACAGGTGCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGGGTGGTGATGGTTTTATAACTGCTTGAAGAGACAGGTGCCTGT  250

seq1  CAAAGGCTAATGATGTCAACTGCTCAGTGTTCAAGGGTAGAGAAGAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCTAATGATGTCAACTGCTCAGTGTTCAAGGGTAGAGAAGAACCT  300

seq1  TGGGTCTACCCATTGCTCAAGGATTTATTCCCTAGCCAGAGGAGAGTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTACCCATTGCTCAAGGATTTATTCCCTAGCCAGAGGAGAGTTTG  350

seq1  AATTGTGACTATCATGATCTGCGTTTCCCACCAAGACAGAGAAGTATGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGACTATCATGATCTGCGTTTCCCACCAAGACAGAGAAGTATGTC  400

seq1  ATCAACCTGATCTGTACTACTCAGGGTCAAGTCCTTAAGTGGCTGCCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACCTGATCTGTACTACTCAGGGTCAAGTCCTTAAGTGGCTGCCATG  450

seq1  CTATAGCTTAGTTCTAAGCCTGAGTTATCTTCATAGTGATTTTTAGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGCTTAGTTCTAAGCCTGAGTTATCTTCATAGTGATTTTTAGAAAC  500

seq1  ATTAGGGTTTGTATCCATGACCAAGTGAGGTGGCTTCTCACCTCAGTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGGTTTGTATCCATGACCAAGTGAGGTGGCTTCTCACCTCAGTCAG  550

seq1  TGCAAATCCAGGAGAAGCTGAGAGCTAACAAAGAGGAGAAAGGTTCATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATCCAGGAGAAGCTGAGAGCTAACAAAGAGGAGAAAGGTTCATTG  600

seq1  CCTATAACAGATAAGGGAGACACAAGAGTTATTTCCAGGGCAGTAGCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATAACAGATAAGGGAGACACAAGAGTTATTTCCAGGGCAGTAGCCTT  650

seq1  ATGAATTGAGGAAGCAATAGTCTTGGTTGGATAGTCTACCTATTCATACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTGAGGAAGCAATAGTCTTGGTTGGATAGTCTACCTATTCATACA  700

seq1  GGAAATCATTGTGGGGGGTGGG  722
      ||||||||||||||||||||||
seq2  GGAAATCATTGTGGGGGGTGGG  722