BAC Information

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BAC

Clone NameB6Ng01-078B22
Chromosome18 (Build37)
Map Location 26,092,042 - 26,093,152
singlet/doubletsinglet
Overlap genenone
Upstream geneFhod3, 5730494M16Rik, AW554918, Brunol4, LOC100041241, LOC665916, LOC100041263
Downstream geneLOC100041274
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078B22.bB6Ng01-078B22.g
ACCDH893909DH893910
length1,1201,161
definitionDH893909|Mus musculus domesticus DNA, BAC clone: B6Ng01-078B22, 5' end.DH893910|Mus musculus domesticus DNA, BAC clone: B6Ng01-078B22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgcatcaattccttttataattaacaggaattctaattgaaca
aacaaaatgtaataaagcctatgtctcaccataaacttcatattctgatc
taaaatattcacaattgtttatgttaacagagatattgtcaaatgccaaa
caatacctgttctgtgtgattttcatttatgtttattatgttaaagtgtt
tctgtgttttcatcttcttcttagaatagtgctatgagtaaaggctgttc
tcatgcctctatgtatgaaggcaaaccaaaagacatgagtcagccatcta
cagcagcaaggaaatgttgggagtggacagcctctcaataccttctgctt
ctccaagtggccaaactcacctgcagatcttgcagcatgtactaatcact
atgtttagtgcttctatacgggacatgatttactcaaaaaaattaaaata
gaaggaagaaaaaggcttttgtatagaaagtatgactcttacagacccta
ctacccagtgacttacaagggctagaatgaggcatttagcacagggcaag
agcagttagcaaaatacaatccagccctgtctagagccccaggtcactga
gaaccaggcctttcctagactattgtccacctgcaagcctgagattgttc
caaattaagtttttaatgaaggtctcctctggaaacaaatctttatggca
atgagcagaagttggatgcacattggtgattcatgagtcaatacacaagg
aagtcccaaatatgtctactacattcaacatttctgccatcagcaactcc
cagattgactgcagaaaggttgaggccattgatttaagaagttccataaa
aggggaccagtgcaatttgagaggctaggactatcctgagcaaccctttg
agatatctctggagtcatggttttaaaacctcttttgagtgctgataaag
ggatgcctgaatgtctcacctcagttattcctcattacactatatataaa
gctgtctctgctatcaccatcttctccaagaagaaacaaaggtaagaaga
ggtttagaaaacaaatactaaacacatgccatttattttgtaggagttca
ggaaagaagaaaacattgat
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
gaattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccaaatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaggctcccaa
tggaaggagctagagaaagtactcaacgagctaaaggatcttcaacccta
taggtggaacacattatgaactaaccagtaccctgagctcttgactctag
ctgcatatgtttcaaagatgccctagtcggcatcactggagagaagccca
attggaccacaacctttgtgtgtcccgttacaggaccgccaggccaaaaa
ggggggaagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_26092042_26093152
seq2: B6Ng01-078B22.b_44_1163 (reverse)

seq1  ATCAATGTTT--CTCTTT-CTG-ACTCCTAC-AAATTAATGGCATGTGTT  45
      ||||||||||   ||||| ||| |||||||| |||| |||||||||||||
seq2  ATCAATGTTTTCTTCTTTCCTGAACTCCTACAAAATAAATGGCATGTGTT  50

seq1  TAGTATT--GTTTCTTAACCTC-TCTTACCTTTGTTTCTTCTTTGGAG-A  91
      |||||||   ||||| |||||| |||||||||||||||||| |||||| |
seq2  TAGTATTTGTTTTCTAAACCTCTTCTTACCTTTGTTTCTTC-TTGGAGAA  99

seq1  GATGGTGATAGCAGAGACAGCTTTATATATAGTGTAATGAGGAATAACTG  141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTGATAGCAGAGACAGCTTTATATATAGTGTAATGAGGAATAACTG  149

seq1  AGGTGAGACATTCAGGCATCCCTTTATCAGCACTCAAAAGAGGTTTTAAA  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAGACATTCAGGCATCCCTTTATCAGCACTCAAAAGAGGTTTTAAA  199

seq1  ACCATGACTCCAGAGATATCTCAAAGGGTTGCTCAGGATAGTCCTAGCCT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGACTCCAGAGATATCTCAAAGGGTTGCTCAGGATAGTCCTAGCCT  249

seq1  CTCAAATTGCACTGGTCCCCTTTTATGGAACTTCTTAAATCAATGGCCTC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATTGCACTGGTCCCCTTTTATGGAACTTCTTAAATCAATGGCCTC  299

seq1  AACC-TTCTGCAGTCAATCTGGGAGTTGCTGATGGCAGAAATGTTGAATG  340
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTCTGCAGTCAATCTGGGAGTTGCTGATGGCAGAAATGTTGAATG  349

seq1  TAGTAGACATATTTGGGACTTCCTTGTGTATTGACTCATGAATCACCAAT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGACATATTTGGGACTTCCTTGTGTATTGACTCATGAATCACCAAT  399

seq1  GTGCATCCAACTTCTGCTCATTGCCATAAAGATTTGTTTCCAGAGGAGAC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATCCAACTTCTGCTCATTGCCATAAAGATTTGTTTCCAGAGGAGAC  449

seq1  CTTCATTAAAAACTTAATTTGGAACAATCTCAGGCTTGCAGGTGGACAAT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTAAAAACTTAATTTGGAACAATCTCAGGCTTGCAGGTGGACAAT  499

seq1  AGTCTAGGAAAGGCCTGGTTCTCAGTGACCTGGGGCTCTAGACAGGGCTG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTAGGAAAGGCCTGGTTCTCAGTGACCTGGGGCTCTAGACAGGGCTG  549

seq1  GATTGTATTTTGCTAACTGCTCTTGCCCTGTGCTAAATGCCTCATTCTAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTATTTTGCTAACTGCTCTTGCCCTGTGCTAAATGCCTCATTCTAG  599

seq1  CCCTTGTAAGTCACTGGGTAGTAGGGTCTGTAAGAGTCATACTTTCTATA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGTAAGTCACTGGGTAGTAGGGTCTGTAAGAGTCATACTTTCTATA  649

seq1  CAAAAGCCTTTTTCTTCCTTCTATTTTAATTTTTTTGAGTAAATCATGTC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCCTTTTTCTTCCTTCTATTTTAATTTTTTTGAGTAAATCATGTC  699

seq1  CCGTATAGAAGCACTAAACATAGTGATTAGTACATGCTGCAAGATCTGCA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTATAGAAGCACTAAACATAGTGATTAGTACATGCTGCAAGATCTGCA  749

seq1  GGTGAGTTTGGCCACTTGGAGAAGCAGAAGGTATTGAGAGGCTGTCCACT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGTTTGGCCACTTGGAGAAGCAGAAGGTATTGAGAGGCTGTCCACT  799

seq1  CCCAACATTTCCTTGCTGCTGTAGATGGCTGACTCATGTCTTTTGGTTTG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACATTTCCTTGCTGCTGTAGATGGCTGACTCATGTCTTTTGGTTTG  849

seq1  CCTTCATACATAGAGGCATGAGAACAGCCTTTACTCATAGCACTATTCTA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATACATAGAGGCATGAGAACAGCCTTTACTCATAGCACTATTCTA  899

seq1  AGAAGAAGATGAAAACACAGAAACACTTTAACATAATAAACATAAATGAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGATGAAAACACAGAAACACTTTAACATAATAAACATAAATGAA  949

seq1  AATCACACAGAACAGGTATTGTTTGGCATTTGACAATATCTCTGTTAACA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACACAGAACAGGTATTGTTTGGCATTTGACAATATCTCTGTTAACA  999

seq1  TAAACAATTGTGAATATTTTAGATCAGAATATGAAGTTTATGGTGAGACA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAATTGTGAATATTTTAGATCAGAATATGAAGTTTATGGTGAGACA  1049

seq1  TAGGCTTTATTACATTTTGTTTGTTCAATTAGAATTCCTGTTAATTATAA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTTATTACATTTTGTTTGTTCAATTAGAATTCCTGTTAATTATAA  1099

seq1  AAGGAATTGATGCATGAATTC  1111
      |||||||||||||||||||||
seq2  AAGGAATTGATGCATGAATTC  1120