BAC Information

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BAC

Clone NameB6Ng01-079P17
Chromosome18 (Build37)
Map Location 7,795,166 - 7,795,909
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039635, Mkx, LOC664778, Armc4, Mpp7, EG622384, LOC100039562
Downstream geneLOC100039606, Wac, LOC665121, LOC225134, LOC665132, EG433158, EG545242
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079P17.bB6Ng01-079P17.g
ACCDH895243DH895244
length1,1691,170
definitionDH895243|Mus musculus domesticus DNA, BAC clone: B6Ng01-079P17, 5' end.DH895244|Mus musculus domesticus DNA, BAC clone: B6Ng01-079P17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaagttagactccagagagtccaataaacctattaaaaatgg
ggtacagagctaaacaaagaattctcaactgaggaatgtcaaatggctga
gaagcacctaaagaaatgttcaacatccttagtcatcagaaaaatgcaaa
tcaaaacaaccctgagattctacctcataccagtcataatgattaagaat
aaaaactcaggtgacagcagatactagtgaggatgtggagaaagaagaac
acccctccattgctagtgggattgtgtactggctggtttttagtttctac
ttgatgcagactgatgttatcacagataaaggagcttcagttggggaagt
gcctccatgagatccatctgtggggcattttctttgttggtgatcaaggg
gggtgggcccattgtgggtggtgccattcctgggccggtagtcttgggtt
ctataagaacaagctgaacaaaccagggaaagtaagccagtaagtaacat
ctctccatggcctctgcatcagctcctgattcctgacctgcttcagttcc
agtcctaacttcctttagtgatgaacagaaatatggaagtgtaagttaaa
taaaccctttcctccccaacttgcttcttggtcatgatgtttgtgccgga
atagaaaccctgactaagacagattgcaagctggtacaaccactcaggaa
atcagtctggtggttcctcagaaaattggacatagtactacctgaggacc
cagctataccactcctgggcctatacccaaaagagtctccaacatataat
aaggacacatgctccactatgttcatagcagccttatttatttataatag
ccagaatctggaaagaaccacacacacacacacacacacacacacacaca
gagtattagatatctactcttttatcaagagagttactggggactaagag
atgacttgtcaactaagagcacttgctacccttgtagagaacctggattc
agttcttagccctcaacaaatgcctgaaactccagttccagggtatggtg
acaaccatcttctggcattttggagcatggcatacatggtggtgcacttc
agaaaaaaaatatcccatgccccataaaacataaaaaaaatcccttaaga
aagagaaaggtactttcct
gaattcttcatctgcttcagagctactaagagctggctccccgagcccat
ccagcgatgagcacaggctccttttcctagagacctccgctaattgatct
ttcttcttttccctttttcctctttttcttctaatctctctccaggtatt
cctacctaaccttaacttttcctcgggttcaagacccttggaaaggcctg
tatacttattttgtgtaccatatttcctctttgttcctactctctctccc
cactttacttctgatagcttgtcctgaatttcatctagaatcctccctgc
cttaaccacttgataacatgtgaaaaggaacaaaagggcttctaacatta
gaaaaaattcaaggccaaacattttccactttacttctgatagactgtct
tgaatttccttagaaagttcaaggccaggcttacctcgtaaagctgtact
cactggtactctcgttccccagctgaaaagttctgaattcatacagttga
atccttcttaacagtctgctttacgggaacctttattaccgcgacccgca
gttctggttctggaatgagggatcttccttgcgccagtcccgagtttttt
ctcgtcccggaattcggcaccaattgttaataaacgcgttctcacgcccg
gccaggaagaacaccacagaccagaatcttctgcggcaaagctttattgc
ttacatcttcaggagcaggagtgcaagaagcaagagagagagaaaacgaa
accccgtccctattaaggagaattctccttcgcctaggacgtgtcactcc
ctgattggctgcagcccatcggccgagttgacgtcacggggaaggcagag
cacatggagtggagaaccaccctcggcacatgcgcagattatttgtttac
cactagacacagctgtcagcgccatcttgtacggcgaatgtgggcgcgct
ccacattctctatacattagagcatcagttttcagctttcgagcccagta
tattctgacagactttttatgaaattcaatactatttcaatactgctgct
tctttatggaacctcaatgttagctacacaagcggtcacgattgaacttc
tgtctatactgtgttataccttctacttccttcctcttcttcattgctgt
ccccccccacacaagtagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_7795166_7795909
seq2: B6Ng01-079P17.b_462_1213

seq1  GTGGTGCCATTCCTGGGCCGGTAGTCTTGGGTTCTATAAGAACAAGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGCCATTCCTGGGCCGGTAGTCTTGGGTTCTATAAGAACAAGCTGA  50

seq1  ACAAACCAGGGAAAGTAAGCCAGTAAGTAACATCTCTCCATGGCCTCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCAGGGAAAGTAAGCCAGTAAGTAACATCTCTCCATGGCCTCTGC  100

seq1  ATCAGCTCCTGATTCCTGACCTGCTTCAGTTCCAGTCCTAACTTCCTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTCCTGATTCCTGACCTGCTTCAGTTCCAGTCCTAACTTCCTTTA  150

seq1  GTGATGAACAGAAATATGGAAGTGTAAGTTAAATAAACCCTTTCCTCCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGAACAGAAATATGGAAGTGTAAGTTAAATAAACCCTTTCCTCCCC  200

seq1  AACTTGCTTCTTGGTCATGATGTTTGTGCCGGAATAGAAACCCTGACTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGCTTCTTGGTCATGATGTTTGTGCCGGAATAGAAACCCTGACTAA  250

seq1  GACAGATTGCAAGCTGGTACAACCACTCAGGAAATCAGTCTGGTGGTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATTGCAAGCTGGTACAACCACTCAGGAAATCAGTCTGGTGGTTCC  300

seq1  TCAGAAAATTGGACATAGTACTACCTGAGGACCCAGCTATACCACTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAATTGGACATAGTACTACCTGAGGACCCAGCTATACCACTCCTG  350

seq1  GGCCTATACCCAAAAGAGTCTCCAACATATAATAAGGACACATGCTCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTATACCCAAAAGAGTCTCCAACATATAATAAGGACACATGCTCCAC  400

seq1  TATGTTCATAGCAGCCTTATTTATTTATAATAGCCAGAATCTGGAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCATAGCAGCCTTATTTATTTATAATAGCCAGAATCTGGAAAGAA  450

seq1  CCACACACACACACACACACACACACACACACAGAGTATTAGATATCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACACACACACACACACACACACACACACAGAGTATTAGATATCTAC  500

seq1  TCTTTTATCAAGAGAGTTACTGGGGACTAAGAGATGACTTGTCAACTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATCAAGAGAGTTACTGGGGACTAAGAGATGACTTGTCAACTAAG  550

seq1  AGCACTTGCTACCCTTGTAGAGAACCTGGATTCAGTTCTTAGCACTC-AC  599
      ||||||||||||||||||||||||||||||||||||||||||| ||| ||
seq2  AGCACTTGCTACCCTTGTAGAGAACCTGGATTCAGTTCTTAGCCCTCAAC  600

seq1  AAATGCCTGAAACTCCAGTTCCAGGGTAT-GTGAC-ACCATCTTCTGGCA  647
      ||||||||||||||||||||||||||||| ||||| ||||||||||||||
seq2  AAATGCCTGAAACTCCAGTTCCAGGGTATGGTGACAACCATCTTCTGGCA  650

seq1  TTTT-GAGCACTGCATACAT-GTGGTGCACTTACAGAAAAAAAATA-CCC  694
      |||| |||||  |||||||| ||||||||||| ||||||||||||| |||
seq2  TTTTGGAGCATGGCATACATGGTGGTGCACTT-CAGAAAAAAAATATCCC  699

seq1  ATG-CACATAAAAC--TAAATAGATCCCTAAAAGAAGAGAAGGTAACTTT  741
      ||| | ||||||||   ||| | |||||| ||  ||||||| |  |||||
seq2  ATGCCCCATAAAACATAAAAAAAATCCCTTAAGAAAGAGAAAGGTACTTT  749

seq1  CCT  744
      |||
seq2  CCT  752