BAC Information

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BAC

Clone NameB6Ng01-080H21
Chromosome18 (Build37)
Map Location 22,378,968 - 22,380,092
singlet/doubletsinglet
Overlap genenone
Upstream geneGm944, LOC665722, LOC225264, Klhl14, 4921528I01Rik
Downstream geneLOC546708, LOC100040547, Asxl3, Nol4, LOC100040579, LOC665797
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080H21.bB6Ng01-080H21.g
ACCDH895615DH895616
length1,112968
definitionDH895615|Mus musculus domesticus DNA, BAC clone: B6Ng01-080H21, 5' end.DH895616|Mus musculus domesticus DNA, BAC clone: B6Ng01-080H21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttagcataagatcaagatagccaggaggaagaggattctcagcc
caataaggaaactgagatcatattggaatctttaacctgatatctgtgtt
agtttcagaacctctaaatcatgaagcctgaggtatgctctggtaattca
tacataagagaccccagtgttccaaatagaagacaacgagagctagaata
tctcccaggctaccctggaacaggcattatttcagtggatcaattgttga
gttcgatattgtggagttttcatgttactgttcctagcttcttcaagagt
catgcaatacatgaagaaaattatgaaccctgcaggctagtatttactct
ttagagggtctgtagtacattgtctggactatttactttcttatgtgtag
ggtaatacaagataaagtcattaaattacttagttatacttagtatcatc
tactatgactttttaaagtttctatgaattaaagacattttgttccatca
tttcacatgagttttgctattacatcattttgttttgctgaagaaaaaag
tttccagaagctaggacacttgagtatggtgatatgaaatgtattagatc
caatattaaccaaatgcatagagttgactgttccagcatagaaggtcatg
tctagtactcctttcggtattggtcttattttctaggagatttaagacaa
ccttaaagttgtccagaaagccagacttcttgaatgttgtgaaagaagtg
ttctgacatagattggattctatgaggttaatctagaattaactttattt
taagaaagaaattattaaggtaaatattttaaagttttgttcagattagt
ttgggtaagcctattcacataggaatgctagactacttattgtacctcac
ttagaaataaagtccctggatggtccatcctttcgtctcagctccaaact
ttgtctctgtaactccttcatgagtattttgttccctattctaatgagga
tgaagtatccacacgttggtctccttcttcctaatttcttgtgcttgcaa
atgtatctgggtatctaagttctgggctaaatcactatcagtgagtgcat
atcaagtgagtc

gaattctttgtttagctctgtacctcattttttaaaatagggttatttgg
tttttctctagtctaacttcctgagttctttgtatttattggatattagc
cctctatcagatttaggattggtaaagatcttttcccaatctgttggttg
ccttttagtcttattgacagtgtcctttgccttacagaagctttgcaatt
ttatgaggttccatttgttaatacttaatcttacagtacaagctgttgtt
tttatcttcaggaatatatccactgtgctcatatattcaagattcttccc
cactacctcctatattagtttgagtgtctctggttttatgtggaggtcct
tgatccacttagacttgagctttgtacaaggagataagaatggatcaatt
cacattcttttacataataaccaccagttgagtcagcaccatttgttgaa
aatgctgtcttttttccactggatggttttagctcctttgtcgaaaatca
agtgaccataggtgtgtgggttcatttctgggtcttcaattttatttcat
tcatctacctgtatgtcactgtacaagtaccatgaagtttttatcacaat
tcctctgtagtagagtttgaggtcaggtatggtgattctgcaaatactga
tgttttgacttcttcctttccaatttgtattcctttgatctccttttgtt
gtcaaattgatctgactaggacttcaagtactatattaaataggtagtga
gagggtgggtagccttgtctagtccctgattttagtaggattgcttccag
tttctcattatttactttgatgtttgctactggtttgctgtatattgctg
tcattaagttttaggtatgggccttgaattccttgatctttctaagactt
ttatcatgaaggggtgttggtctttgtcaaatgcctctcagcatctaatg
agacgatcatggtgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22378968_22380092
seq2: B6Ng01-080H21.b_43_1154 (reverse)

seq1  GACTCACTTGATATGCACTCACTGATAAGTGGATATTAGCCCAGAAACTT  50
      |||||||||||||||||||||||||| ||| ||| ||||||||| |||||
seq2  GACTCACTTGATATGCACTCACTGAT-AGT-GAT-TTAGCCCAG-AACTT  46

seq1  AGAATACCCAAGATACATTTTGCAAAGCACAAGAAAATTAAGAAGAAGGA  100
      || |||||| ||||||| ||||| ||||||||| |||||| |||||||| 
seq2  AG-ATACCC-AGATACA-TTTGC-AAGCACAAG-AAATTAGGAAGAAGG-  90

seq1  AGACCAACGTGTGGATACTTCATTCCTCATTAGAATAGGGAACAAAATAC  150
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGACCAACGTGTGGATACTTCA-TCCTCATTAGAATAGGGAACAAAATAC  139

seq1  TCATGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACGAAAGGATGG  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAT-GAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGACGAAAGGATGG  188

seq1  ACCATCCAGGGACTTTAATTTCTAAGTGAGGTACAATAAGTAGTCTAGCA  250
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACCATCCAGGGACTTT-ATTTCTAAGTGAGGTACAATAAGTAGTCTAGCA  237

seq1  TTCCTATGTGAATAGGCTTA-CCAAACTAATCTGAACAAAACTTTAAAAT  299
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTCCTATGTGAATAGGCTTACCCAAACTAATCTGAACAAAACTTTAAAAT  287

seq1  ATTTACCTTAATAATTTCTTTCTTAAAATAAAGTTAATTCTAGATTAACC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCTTAATAATTTCTTTCTTAAAATAAAGTTAATTCTAGATTAACC  337

seq1  TCATAGAATCCAATCTATGTCAGAACACTTTCTTTCACAACATTCAAGAA  399
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TCATAGAATCCAATCTATGTCAGAACAC-TTCTTTCACAACATTCAAGAA  386

seq1  GTCTGGCTTTCTGGACAACTTTAAGGTTGTCTTAAATCTCCTAGAAAATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGCTTTCTGGACAACTTTAAGGTTGTCTTAAATCTCCTAGAAAATA  436

seq1  AGACCAATACCGAAAGGAGTACTAGACATGACCTTCTATGCTGGAACAGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAATACCGAAAGGAGTACTAGACATGACCTTCTATGCTGGAACAGT  486

seq1  CAACTCTATGCATTTGGTTAATATTGGATCTAATACATTTCATATCACCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTATGCATTTGGTTAATATTGGATCTAATACATTTCATATCACCA  536

seq1  TACTCAAGTGTCCTAGCTTCTGGAAACTTTTTTCTTCAGCAAAACAAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAAGTGTCCTAGCTTCTGGAAACTTTTTTCTTCAGCAAAACAAAAT  586

seq1  GATGTAATAGCAAAACTCATGTGAAATGATGGAACAAAATGTCTTTAATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTAATAGCAAAACTCATGTGAAATGATGGAACAAAATGTCTTTAATT  636

seq1  CATAGAAACTTTAAAAAGTCATAGTAGATGATACTAAGTATAACTAAGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAAACTTTAAAAAGTCATAGTAGATGATACTAAGTATAACTAAGTA  686

seq1  ATTTAATGACTTTATCTTGTATTACCCTACACATAAGAAAGTAAATAGTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGACTTTATCTTGTATTACCCTACACATAAGAAAGTAAATAGTC  736

seq1  CAGACAATGTACTACAGACCCTCTAAAGAGTAAATACTAGCCTGCAGGGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAATGTACTACAGACCCTCTAAAGAGTAAATACTAGCCTGCAGGGT  786

seq1  TCATAATTTTCTTCATGTATTGCATGACTCTTGAAGAAGCTAGGAACAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATTTTCTTCATGTATTGCATGACTCTTGAAGAAGCTAGGAACAGT  836

seq1  AACATGAAAACTCCACAATATCGAACTCAACAATTGATCCACTGAAATAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAAAACTCCACAATATCGAACTCAACAATTGATCCACTGAAATAA  886

seq1  TGCCTGTTCCAGGGTAGCCTGGGAGATATTCTAGCTCTCGTTGTCTTCTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTTCCAGGGTAGCCTGGGAGATATTCTAGCTCTCGTTGTCTTCTA  936

seq1  TTTGGAACACTGGGGTCTCTTATGTATGAATTACCAGAGCATACCTCAGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAACACTGGGGTCTCTTATGTATGAATTACCAGAGCATACCTCAGG  986

seq1  CTTCATGATTTAGAGGTTCTGAAACTAACACAGATATCAGGTTAAAGATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGATTTAGAGGTTCTGAAACTAACACAGATATCAGGTTAAAGATT  1036

seq1  CCAATATGATCTCAGTTTCCTTATTGGGCTGAGAATCCTCTTCCTCCTGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATGATCTCAGTTTCCTTATTGGGCTGAGAATCCTCTTCCTCCTGG  1086

seq1  CTATCTTGATCTTATGCTAAGAATTC  1125
      ||||||||||||||||||||||||||
seq2  CTATCTTGATCTTATGCTAAGAATTC  1112


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