BAC Information

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BAC

Clone NameB6Ng01-080I24
Chromosome18 (Build37)
Map Location 59,364,483 - 59,525,976
singlet/doubletdoublet
Overlap gene4833446K15Rik
Upstream geneFbn2, Slc27a6, Isoc1, Adamts19, A730017C20Rik
Downstream geneLOC667549, EG240327, LOC546714, EG225594, F830016B08Rik, LOC667578, EG667584
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080I24.bB6Ng01-080I24.g
ACCDH895666DH895667
length1,1101,055
definitionDH895666|Mus musculus domesticus DNA, BAC clone: B6Ng01-080I24, 5' end.DH895667|Mus musculus domesticus DNA, BAC clone: B6Ng01-080I24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,524,858 - 59,525,976)(59,364,483 - 59,365,539)
sequence
gaattcaacattaagtcagccaagctgttccccccattttgtctctgctc
tctgttttatcttcttgcctacagccactttctaccatgaagtaactcct
acttcagacatcgacccatgtgtttgactctgaagtcttggactgtgtac
aatgtctctttctagcccaaagttctttctggtttgtttcacagacttcc
agttaaaaccctactacctgaaatatttcctagctggctgcctatgccta
cttcccacctcggccttcccttagacccatgctgagatgttgtcctcggt
ttatagtgcacaggtacttggtcctgcctctgcccttgtacacagtcttt
atcccagctatacctctctaacttcagtcttctgccaaaggggctttaat
tctgaaaaaggcatcattagtgttacagagaatgaatcagcagtctgctg
cctagcctatggaagcattcctgtgtgttgcttaattagcatgctgttga
tacactgggtttgttttacctttgctttctcctttgctttcttaaaaaaa
ttagctatcaaaatttagaactgagaaaataatacacacacacacacaca
cacacacacacacacacatacacacacatacattgggtttgttttacctt
tgctttctccaaaaaattagctatcaaaatttagaactgagaaaataata
cacacacacacacacacacacacacacacacacataatacaactagattt
ctaggtttgattaaaggtggggctgtagcaatactgtgtctgtatcgcaa
caggacagtggttgtgacccttccagctgttaatatcttttcagatgatg
tagctttactgtagactgtcacctccctccatgaggtcaaatataactga
cccttattattatgtttgtatattactctttcattatggaagatgaaagt
gggcaagaaaagattcaaaccatagatctatgatttagataaaacatttt
ttttttgtcaccggtaaatgatgagaatcagaaattgatatagtcacatg
tttaaatttgtgtattggaagagaagtgaagaggaaggaggtacaagaga
agaagcaaag
gaattccttactggcactagtgaccagaggactaagaactactggtgggg
catcctttccttaagtctacctagccaacttctatgccttcttctcacca
ttttcctgtgatcaggtaaccctaactgtcatccagtggattgagacatc
tatttatctgactcttagagctgaatggggttgtcaggtatgacagttgg
gatagctctccaatggggcagttgggatagccctccagtggggcagttgg
gatagccctccagtggggaagttaggatagccctccagtggggcagttgg
gatagtcctccagtggggaagttgggatagccctccagtggggcagttgg
gatagccctccagtatggcaaattagaactccagtgttccatttgtatat
tctggttcctggatagacatgaggaagaaataaagataagacttattacc
actaactgtcctagacagaacaccaggagatgccaaaaacaatattttaa
aaatcacaagcctaaactagttagaatcttgtaatagacttgcaaaggca
tcatccatctattgaggaggcctcctcctcatttcttttggcctctgagg
atggactttagagttaactgttgttggagtggctagaatcgcaatatgag
taccatcctagatggcttctagacacagaacaaagaagcataaccatccc
ttggaaacagtagtggacctttctctctcagctgcaggtaggacacagca
gtgttgagttacaccaagctcctgatatcctgtatctggattctcatggg
gaacatgggttctatttgattttagagtcatcgcttcaaaggagggagag
taaaaactgggatcgacttatgggtggacacctaccaccgttgtctgtcc
ttaagtgttatttagatcagtagcttagtgaccagaccatgggacactta
tgaagtttgatccaccttcaagccttggtgaaggggagaggaagaataaa
taatcatgtgacgtgggaagacattgggtctttctcagattccggccccc
tctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59524858_59525976
seq2: B6Ng01-080I24.b_47_1156 (reverse)

seq1  CTTTGCCTTCTTCTCTTGTACCCTCCCTCTCCTTCTTTCACCTTCTCTCC  50
      ||||| |||||||||||||| ||||| ||  ||||      ||||||| |
seq2  CTTTG-CTTCTTCTCTTGTA-CCTCCTTCCTCTTC-----ACTTCTCTTC  43

seq1  AAATACACAAATTT-AACATGTGACTATATCAATTTCTGGTTTTCTCATT  99
       ||||||||||||| ||||||||||||||||||||||||   |||||| |
seq2  CAATACACAAATTTAAACATGTGACTATATCAATTTCTG--ATTCTCA-T  90

seq1  CATTTACCGGTGAC--AAAAAAAATGTTTTATCTTAAATCATAGATCTAT  147
      ||||||||||||||  ||||||||||||||||| ||||||||||||||||
seq2  CATTTACCGGTGACAAAAAAAAAATGTTTTATC-TAAATCATAGATCTAT  139

seq1  GGTTTGAATCTTTTCTTGCCCACTTTCATCTTCCATAATGAAAGAGTAAT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGAATCTTTTCTTGCCCACTTTCATCTTCCATAATGAAAGAGTAAT  189

seq1  AATACAAACATAATAATAAGGGTCAGTTATATTTGACCTCATGGAGGGAG  247
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -ATACAAACATAATAATAAGGGTCAGTTATATTTGACCTCATGGAGGGAG  238

seq1  GTGACAGTCTACAGTAAAGCTACATCATCTGAAAAGATATTAACAGCTGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGTCTACAGTAAAGCTACATCATCTGAAAAGATATTAACAGCTGG  288

seq1  AAGGGTCACAACCACTGTCCTGTTGCGATACAGACACAGTATTGCTACAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTCACAACCACTGTCCTGTTGCGATACAGACACAGTATTGCTACAG  338

seq1  CCCCACCTTTAATCAAACCTAGAAATCTAGTTGTATTATGTGTGTGTGTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCTTTAATCAAACCTAGAAATCTAGTTGTATTATGTGTGTGTGTG  388

seq1  TGTGTGTGTGTGTGTGTGTGTGTATTATTTTCTCAGTTCTAAATTTTGAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTATTATTTTCTCAGTTCTAAATTTTGAT  438

seq1  AGCTAATTTTTTGGAGAAAGCAAAGGTAAAACAAACCCAATGTATGTGTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATTTTTTGGAGAAAGCAAAGGTAAAACAAACCCAATGTATGTGTG  488

seq1  TGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTATTTTCTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTATTTTCTC  538

seq1  AGTTCTAAATTTTGATAGCTAATTTTTTTAAGAAAGCAAAGGAGAAAGCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTAAATTTTGATAGCTAATTTTTTTAAGAAAGCAAAGGAGAAAGCA  588

seq1  AAGGTAAAACAAACCCAGTGTATCAACAGCATGCTAATTAAGCAACACAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAAAACAAACCCAGTGTATCAACAGCATGCTAATTAAGCAACACAC  638

seq1  AGGAATGCTTCCATAGGCTAGGCAGCAGACTGCTGATTCATTCTCTGTAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGCTTCCATAGGCTAGGCAGCAGACTGCTGATTCATTCTCTGTAA  688

seq1  CACTAATGATGCCTTTTTCAGAATTAAAGCCCCTTTGGCAGAAGACTGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATGATGCCTTTTTCAGAATTAAAGCCCCTTTGGCAGAAGACTGAA  738

seq1  GTTAGAGAGGTATAGCTGGGATAAAGACTGTGTACAAGGGCAGAGGCAGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAGAGGTATAGCTGGGATAAAGACTGTGTACAAGGGCAGAGGCAGG  788

seq1  ACCAAGTACCTGTGCACTATAAACCGAGGACAACATCTCAGCATGGGTCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTACCTGTGCACTATAAACCGAGGACAACATCTCAGCATGGGTCT  838

seq1  AAGGGAAGGCCGAGGTGGGAAGTAGGCATAGGCAGCCAGCTAGGAAATAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAAGGCCGAGGTGGGAAGTAGGCATAGGCAGCCAGCTAGGAAATAT  888

seq1  TTCAGGTAGTAGGGTTTTAACTGGAAGTCTGTGAAACAAACCAGAAAGAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTAGTAGGGTTTTAACTGGAAGTCTGTGAAACAAACCAGAAAGAA  938

seq1  CTTTGGGCTAGAAAGAGACATTGTACACAGTCCAAGACTTCAGAGTCAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGCTAGAAAGAGACATTGTACACAGTCCAAGACTTCAGAGTCAAA  988

seq1  CACATGGGTCGATGTCTGAAGTAGGAGTTACTTCATGGTAGAAAGTGGCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGGTCGATGTCTGAAGTAGGAGTTACTTCATGGTAGAAAGTGGCT  1038

seq1  GTAGGCAAGAAGATAAAACAGAGAGCAGAGACAAAATGGGGGGAACAGCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCAAGAAGATAAAACAGAGAGCAGAGACAAAATGGGGGGAACAGCT  1088

seq1  TGGCTGACTTAATGTTGAATTC  1119
      ||||||||||||||||||||||
seq2  TGGCTGACTTAATGTTGAATTC  1110

seq1: chr18_59364483_59365539
seq2: B6Ng01-080I24.g_70_1124

seq1  GAATTCCTTACTGGCACTAGTGACCAGAGGACTAAGAACTACTGGTGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTACTGGCACTAGTGACCAGAGGACTAAGAACTACTGGTGGGG  50

seq1  CATCCTTTCCTTAAGTCTACCTAGCCAACTTCTATGCCTTCTTCTCACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTTTCCTTAAGTCTACCTAGCCAACTTCTATGCCTTCTTCTCACCA  100

seq1  TTTTCCTGTGATCAGGTAACCCTAACTGTCATCCAGTGGATTGAGACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGTGATCAGGTAACCCTAACTGTCATCCAGTGGATTGAGACATC  150

seq1  TATTTATCTGACTCTTAGAGCTGAATGGGGTTGTCAGGTATGACAGTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATCTGACTCTTAGAGCTGAATGGGGTTGTCAGGTATGACAGTTGG  200

seq1  GATAGCTCTCCAATGGGGCAGTTGGGATAGCCCTCCAGTGGGGCAGTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCTCTCCAATGGGGCAGTTGGGATAGCCCTCCAGTGGGGCAGTTGG  250

seq1  GATAGCCCTCCAGTGGGGAAGTTAGGATAGCCCTCCAGTGGGGCAGTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCCCTCCAGTGGGGAAGTTAGGATAGCCCTCCAGTGGGGCAGTTGG  300

seq1  GATAGTCCTCCAGTGGGGAAGTTGGGATAGCCCTCCAGTGGGGCAGTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTCCTCCAGTGGGGAAGTTGGGATAGCCCTCCAGTGGGGCAGTTGG  350

seq1  GATAGCCCTCCAGTATGGCAAATTAGAACTCCAGTGTTCCATTTGTATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCCCTCCAGTATGGCAAATTAGAACTCCAGTGTTCCATTTGTATAT  400

seq1  TCTGGTTCCTGGATAGACATGAGGAAGAAATAAAGATAAGACTTATTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTCCTGGATAGACATGAGGAAGAAATAAAGATAAGACTTATTACC  450

seq1  ACTAACTGTCCTAGACAGAACACCAGGAGATGCCAAAAACAATATTTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTGTCCTAGACAGAACACCAGGAGATGCCAAAAACAATATTTTAA  500

seq1  AAATCACAAGCCTAAACTAGTTAGAATCTTGTAATAGACTTGCAAAGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCACAAGCCTAAACTAGTTAGAATCTTGTAATAGACTTGCAAAGGCA  550

seq1  TCATCCATCTATTGAGGAGGCCTCCTCCTCATTTCTTTTGGCCTCTGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCATCTATTGAGGAGGCCTCCTCCTCATTTCTTTTGGCCTCTGAGG  600

seq1  ATGGACTTTAGAGTTAACTGTTGTTGGAGTGGCTAGAATCGCAATATGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTTTAGAGTTAACTGTTGTTGGAGTGGCTAGAATCGCAATATGAG  650

seq1  TACCATCCTAGATGGCTTCTAGACACAGAACAAAGAAGCATAACCATCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCCTAGATGGCTTCTAGACACAGAACAAAGAAGCATAACCATCCC  700

seq1  TTGGAAACAGTAGTGGACCTTTCTCTCTCAGCTGCAGGTAGGACACAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAACAGTAGTGGACCTTTCTCTCTCAGCTGCAGGTAGGACACAGCA  750

seq1  GTGTTGAGTTACACCAAGCTCCTGATATCCTGTATCTGGATTCTCATGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGAGTTACACCAAGCTCCTGATATCCTGTATCTGGATTCTCATGGG  800

seq1  GAACATGGGTTCTATTTGATTTTAGAGTCATCGCTTCAAAGGAGGGAGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGGGTTCTATTTGATTTTAGAGTCATCGCTTCAAAGGAGGGAGAG  850

seq1  TAAAAACTGGGATCGACTTATGGGTGGACACCTACCACCGTTGTCTGTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTGGGATCGACTTATGGGTGGACACCTACCACCGTTGTCTGTCC  900

seq1  TTAAGTGTTAATTTAGATCAGTAGCTTAGTGACCAGACCAAGGGACCACT  950
      ||||||||| |||||||||||||||||||||||||||||| |||| ||||
seq2  TTAAGTGTT-ATTTAGATCAGTAGCTTAGTGACCAGACCATGGGA-CACT  948

seq1  TCATGAAGGTGGATCCACC-TCAAGCCTT-GTGAAGGGGAGAGGAAGAAT  998
      | |||||| | |||||||| ||||||||| ||||||||||||||||||||
seq2  T-ATGAAGTTTGATCCACCTTCAAGCCTTGGTGAAGGGGAGAGGAAGAAT  997

seq1  AAATAATCATGTGACATTGTGAGACATTGTGTCTTTCTCAGAATTCCTGC  1048
      ||||||||||||||| | |  |||||||| ||||||||||| ||||| ||
seq2  AAATAATCATGTGACGTGGGAAGACATTGGGTCTTTCTCAG-ATTCCGGC  1046

seq1  CCTCTCTCT  1057
      || ||||||
seq2  CCCCTCTCT  1055