BAC Information

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BAC

Clone NameB6Ng01-081I01
Chromosome18 (Build37)
Map Location 41,484,847 - 41,604,842
singlet/doubletdoublet
Overlap genenone
Upstream geneKctd16, EG225416, LOC677182
Downstream geneLOC100041988, LOC100041997, Prelid2, Gm851, Sh3rf2, EG435561, Plac8l1, LOC433177, Lars, EG625929, LOC100042757, Rbm27, Pou4f3, LOC100042767
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081I01.bB6Ng01-081I01.g
ACCDH896338DH896339
length398515
definitionDH896338|Mus musculus domesticus DNA, BAC clone: B6Ng01-081I01, 5' end.DH896339|Mus musculus domesticus DNA, BAC clone: B6Ng01-081I01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,484,847 - 41,485,250)(41,604,322 - 41,604,842)
sequence
atcatatccctcttagctttagcagtgaatatggctttcttacatttact
gaaaagtctggaccataaatatcaaggtactagctaagaaaatccaagag
gaaacatttttcatggagaagaaatattcataagaaaggccattgcattg
ttttaaatacccaaaatggcactgtggttctgaaatgtctaaagaaaagc
tacactgcagagaaatgtatttctcaagcttccctcccgaggacaataaa
tatgaaagaacaatgctcaatttggagctctgttcattttgggaaaaaaa
tagttattccttactaaaagaataaaatacaaacaaacccacaaaatgta
tatgtatatatatatatatatatatatatatatatatatgtgtgtgtg
tcttttcagtctgctctaataatacttttcaaaaatgttataaaaacatt
aagagaataagggagctttttttttcttcaatgatcattgagagaatacg
ttctgtaacaacacttgcataattatcctagataatacttagagtgtttc
ctgaaagtgattcataagacttgagagtctgcttgtttggaacgactgct
ccctcagtacctgccaggagagcttcttttaactttcttgtgtgaataga
gaatagagagtgtcacaataaacctaccacagcaaaacaaaacaaaacaa
aaaccccaaaaacagaaaaaccaaaacaaccaatcaaacaaaaaacaaaa
caccatcaccatcaacaaccactctacaagactactaccagcacaacaaa
acaaacaagctctctgattagatgcaagtatacttagggagtcagttagg
cttgagttatatggttcccagaattattaatcattccttctttccttcct
tccttccttccttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_41484847_41485250
seq2: B6Ng01-081I01.b_45_448

seq1  GAATTCATCATATCCCTCTTAGCTTTAGCAGTGAATATGGCTTTCTTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATATCCCTCTTAGCTTTAGCAGTGAATATGGCTTTCTTACA  50

seq1  TTTACTGAAAAGTCTGGACCATAAATATCAAGGTACTAGCTAAGAAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTGAAAAGTCTGGACCATAAATATCAAGGTACTAGCTAAGAAAATC  100

seq1  CAAGAGGAAACATTTTTCATGGAGAAGAAATATTCATAAGAAAGGCCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGAAACATTTTTCATGGAGAAGAAATATTCATAAGAAAGGCCATT  150

seq1  GCATTGTTTTAAATACCCAAAATGGCACTGTGGTTCTGAAATGTCTAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGTTTTAAATACCCAAAATGGCACTGTGGTTCTGAAATGTCTAAAG  200

seq1  AAAAGCTACACTGCAGAGAAATGTATTTCTCAAGCTTCCCTCCCGAGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTACACTGCAGAGAAATGTATTTCTCAAGCTTCCCTCCCGAGGAC  250

seq1  AATAAATATGAAAGAACAATGCTCAATTTGGAGCTCTGTTCATTTTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATATGAAAGAACAATGCTCAATTTGGAGCTCTGTTCATTTTGGGA  300

seq1  AAAAAATAGTTATTCCTTACTAAAAGAATAAAATACAAACAAACCCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAGTTATTCCTTACTAAAAGAATAAAATACAAACAAACCCACAA  350

seq1  AATGTATATGTATATATATATATATATATATATATATATATATATGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATATGTATATATATATATATATATATATATATATATATATGTGTG  400

seq1  TGTG  404
      ||||
seq2  TGTG  404

seq1: chr18_41604322_41604842
seq2: B6Ng01-081I01.g_70_590 (reverse)

seq1  GGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAATGATTAATAATTCTGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAGGAAGGAAGGAAGGAAAGAAGGAATGATTAATAATTCTGGGA  50

seq1  ACCATATAACTCAAGCCTAACTGACTCCCTAAGTATACTTGCATCTAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATATAACTCAAGCCTAACTGACTCCCTAAGTATACTTGCATCTAATC  100

seq1  AGAGAGCTTGTTTGTTTTGTTGTGCTGGTAGTAGTCTTGTAGAGTGGTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCTTGTTTGTTTTGTTGTGCTGGTAGTAGTCTTGTAGAGTGGTTG  150

seq1  TTGATGGTGATGGTGTTTTGTTTTTTGTTTGATTGGTTGTTTTGGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGTGATGGTGTTTTGTTTTTTGTTTGATTGGTTGTTTTGGTTTTT  200

seq1  CTGTTTTTGGGGTTTTTGTTTTGTTTTGTTTTGCTGTGGTAGGTTTATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTGGGGTTTTTGTTTTGTTTTGTTTTGCTGTGGTAGGTTTATTG  250

seq1  TGACACTCTCTATTCTCTATTCACACAAGAAAGTTAAAAGAAGCTCTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACTCTCTATTCTCTATTCACACAAGAAAGTTAAAAGAAGCTCTCCT  300

seq1  GGCAGGTACTGAGGGAGCAGTCGTTCCAAACAAGCAGACTCTCAAGTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTACTGAGGGAGCAGTCGTTCCAAACAAGCAGACTCTCAAGTCTT  350

seq1  ATGAATCACTTTCAGGAAACACTCTAAGTATTATCTAGGATAATTATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCACTTTCAGGAAACACTCTAAGTATTATCTAGGATAATTATGCA  400

seq1  AGTGTTGTTACAGAACGTATTCTCTCAATGATCATTGAAGAAAAAAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGTTACAGAACGTATTCTCTCAATGATCATTGAAGAAAAAAAAAG  450

seq1  CTCCCTTATTCTCTTAATGTTTTTATAACATTTTTGAAAAGTATTATTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTATTCTCTTAATGTTTTTATAACATTTTTGAAAAGTATTATTAG  500

seq1  AGCAGACTGAAAAGAGAATTC  521
      |||||||||||||||||||||
seq2  AGCAGACTGAAAAGAGAATTC  521