BAC Information

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BAC

Clone NameB6Ng01-082N16
Chromosome15 (Build37)18 (Build37)
Map Location 92,845,538 - 92,845,75235,895,452 - 35,896,008
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100042529, Cntn1, Pdzrn4, LOC100042552
Downstream geneLOC100043283, Glt8d3, Yaf2, Zcrb1, Pphln1, LOC627623, Prickle1, Zfp42-ps1, LOC100042627, LOC100042631
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082N16.bB6Ng01-082N16.g
ACCDH897287DH897288
length1,026551
definitionDH897287|Mus musculus domesticus DNA, BAC clone: B6Ng01-082N16, 5' end.DH897288|Mus musculus domesticus DNA, BAC clone: B6Ng01-082N16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(92,845,538 - 92,845,752)(35,895,452 - 35,896,008)
sequence
gaattccaaccatcatgcaattgcagaaactgtctgaagctagcaaagcc
atgcttctgctagagcatgagacaaatcacagtcagctgctgcagaaaat
ctgaagcagcccccgtattcccacacctggaatgaaaataaaaccacatt
cttaaaatatttgtgtttttttttttaaagaaagcaaatcccagaatttt
caaaaatgtcactacatttctccacttctgtttttcttcttaagatttat
ttattattatatctaagtacactgtagctgtcttcagatgcaccagaaga
gggcgtcagatctcattacggatggttgtgagccaccatgtggttgctgg
gatttgaactcaggaccttcgggaagagcagtcggtgctcttaatcactg
agccatctctccagcccctccacttctgttttaagccattaattgtgctg
tgtgaagcagggaattataaacagtgacatttttaatgaaataagtgctt
tttgggtcagtggcgagggttttccgtagacctcttctcctcaattcttt
tttctttttcttttttggtttttcaagacagggtttctctgtatagccct
ggctgtcctggaactcactttgtagaccaggctggccttgaactcagaaa
tctgcctgcctctgccttccaagtgctaggactaaaggcatgcaccacca
cgcccggctttctcctcaattctaatctttatcagttttgatggtctcta
ctgcttttcatttcctgtggaaatataaacagatccatgtctccaacaca
aaacttcctctggcttctgttctgacgtcagagcactgtggattctatct
gcttttttttgttttgttttctctttgtttataagcctttcctttaagac
atgactggatatttctacaactgcttgtcctgtgtttgggcaattggcac
agcctggaattgtatttgatgacacatatcacacttgtcccgggagcacc
taccacttcacccttactgcatcatg
ttttcagcctgtggctagggattcagagttcttgggagctggaccttttc
cccaaactgagctctgtatacttactggctgtccgttctccagaatctcg
tagacgctgttggaataaacccgattcttgatgccagcacggtcgatgtt
ttgctggggcagcatatctcggaatcgaatgttggggtcaactacactca
ggttgtcaggcaccccacagtccaatggaaagaggatgtacagtcttcgg
ctccctgcaccactgagcatgttgttatgtagctgattgaacattcggat
ccgggcctggagccctgcagtagggaagcccaagaaatcatctcattact
ttgtctcccactcaatctagaactgacactcagctcgttagccttctcag
tgtgagcacaagagaattgggggggggtgtctaatctctctcatcgtaca
ggaaggagatttgggggaagaagagaatattcagggatctcccctttcca
ccccttattctgttttcccgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_92845538_92845752
seq2: B6Ng01-082N16.b_253_467

seq1  AAATGTCACTACATTTCTCCACTTCTGTTTTTTTTTCTTAAGATTTATTT  50
      ||||||||||||||||||||||||||| ||||| ||||||||||||||||
seq2  AAATGTCACTACATTTCTCCACTTCTG-TTTTTCTTCTTAAGATTTATTT  49

seq1  ATTATTATATCTAAGTACACTGTAGCTGTCTTCAGATGCACCAGAAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTATATCTAAGTACACTGTAGCTGTCTTCAGATGCACCAGAAGAGG  99

seq1  GCGTAAGATCTCATTACTGATGGTTGTGAGCCACCATGTGGTTGCTGGGA  150
      |||| |||||||||||| ||||||||||||||||||||||||||||||||
seq2  GCGTCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGA  149

seq1  TTTGAACTCAGGACCTTC-GGAAGAGCAGTTGGTGCTCTTAATCACTGAG  199
      |||||||||||||||||| ||||||||||| |||||||||||||||||||
seq2  TTTGAACTCAGGACCTTCGGGAAGAGCAGTCGGTGCTCTTAATCACTGAG  199

seq1  CCATCTCTCCAGCCCC  215
      ||||||||||||||||
seq2  CCATCTCTCCAGCCCC  215

seq1: chr18_35895452_35896008
seq2: B6Ng01-082N16.g_72_628

seq1  GAATTCTTGTCAGCCTGTGGCTAGGGATTCAGAGTTCTTGGGAGCTGGAC  50
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCAGCCTGTGGCTAGGGATTCAGAGTTCTTGGGAGCTGGAC  50

seq1  CTTTTCCCCAAACTGAGCTCTGTATACTTACTGGCTGTCCGTTCTCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCCCCAAACTGAGCTCTGTATACTTACTGGCTGTCCGTTCTCCAGA  100

seq1  ATCTCGTAGACGCTGTTGGAATAAACCCGATTCTTGATGCCAGCACGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCGTAGACGCTGTTGGAATAAACCCGATTCTTGATGCCAGCACGGTC  150

seq1  GATGTTTTGCTGGGGCAGCATATCTCGGAATCGAATGTTGGGGTCAACTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTTTGCTGGGGCAGCATATCTCGGAATCGAATGTTGGGGTCAACTA  200

seq1  CACTCAGGTTGTCAGGCACCCCACAGTCCAATGGAAAGAGGATGTACAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGGTTGTCAGGCACCCCACAGTCCAATGGAAAGAGGATGTACAGT  250

seq1  CTTCGGCTCCCTGCACCACTGAGCATGTTGTTATGTAGCTGATTGAACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGGCTCCCTGCACCACTGAGCATGTTGTTATGTAGCTGATTGAACAT  300

seq1  TCGGATCCGGGCCTGGAGCCCTGCAGTAGGGAAGCCCAAGAAATCATCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGATCCGGGCCTGGAGCCCTGCAGTAGGGAAGCCCAAGAAATCATCTC  350

seq1  ATTACTTTGTCTCCCACTCAATCTAGAACTGACACTCAGCTCGTTAGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTTGTCTCCCACTCAATCTAGAACTGACACTCAGCTCGTTAGCCT  400

seq1  TCTCAGTGTGAGCACAAGAGAATTGGGGGGGGGTGTCTAATCTCTCTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTGTGAGCACAAGAGAATTGGGGGGGGGTGTCTAATCTCTCTCAT  450

seq1  CGTACAGGAAGGAGATTTGGGGGAAGAAGAGAATATTCAGGGATCTCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACAGGAAGGAGATTTGGGGGAAGAAGAGAATATTCAGGGATCTCCCC  500

seq1  TTTCCACCCCTTATTCTGTTTTCCCGTGTGTGTGTGTGTGTGTGTGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACCCCTTATTCTGTTTTCCCGTGTGTGTGTGTGTGTGTGTGTGTG  550

seq1  TGTGTGT  557
      |||||||
seq2  TGTGTGT  557