BAC Information

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BAC

Clone NameB6Ng01-086J13
Chromosome18 (Build37)
Map Location 59,185,526 - 59,186,770
singlet/doubletsinglet
Overlap geneAdamts19
Upstream geneFbn2, Slc27a6, Isoc1
Downstream geneA730017C20Rik, 4833446K15Rik, LOC667549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086J13.bB6Ng01-086J13.g
ACCDH899949DH899950
length1,2221,162
definitionDH899949|Mus musculus domesticus DNA, BAC clone: B6Ng01-086J13, 5' end.DH899950|Mus musculus domesticus DNA, BAC clone: B6Ng01-086J13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtgtttgtatgttactgaggtctgattcttaatttcccccttc
tctagtgtgacagccctaacctctacatagttatatactttaaaataata
aaggggtgatttgaaaagagttttcagaagtacattagtatgcaccctat
aatgattttggataatcttcatctccattgttgttgttgttattattaat
attttgttttccaagacaaggtttctctatgtaactgtcctggaactcct
tctgtagaccagcttggcctcagactcagagatctcactatctctgcttc
ccagagattgggattaaaggcatgcaccaccatacccagctatgaaatgc
taatttattttatgagatactcttaacattaaaacactgtattttacctc
acatataccgtttgcacgcagtagctttttctgctgcatctgggatctgg
aacatgcttacaatcacaggcctaggacatcctgctttcttcctcatgtg
ctcttagaagcctgtgctgctcagcgtttgtttatcaattgaggcagtca
gccaccttgggggaggatgcctcagtgaagactggctaaacttgtttatt
caaagcaacttcaagagaaaattttgcagcagaggagaagtggtttttgt
tagggaaaattatcttccttccatgagaaagggaggcagtgtccttaaat
gggaagccatgacaatgaagagagcaaggagtgaacagaggccgctgggg
aggctcaccagtcaagtgactagttcttttggaacagtaaccagtttgca
gaacttcctgccagcttccttccagtttccaacccagcctcttcccactg
tttctcctttagttccccaatagacagcttaaacagtcccttcttccagt
tttcccaatacaaacagctccaagctataacaatcattctagcctatctg
tcttcactaactgccttctcctctcactctgctagccctccccaccacaa
gcctcagctggcttttctatctccatcctgttcccagaaatccaagagca
cacgctgagatccacagggtcaagcagttctagcagctaggattcttaaa
ggccacttgacagccaattggggacctttaaagtcagcacctaagattaa
tccatgcagtcatccaaggcatctttcgagacctgtcataggccgatcct
ccttatccatgttctcttatgt
gaattcttacccgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggagacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctgaaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagtt
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaatgctgacaccattgcatacactagcaagattttctcgaaa
ggacccagatgtagctgtctcttgtgagactatgccgggccctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacaaggctccca
atggagagctagagaaagtagccaggagctaagggatctgcaccctatag
atggacacactatgaactacagtacccgagctcttgactctagctgcata
tgtatcaaaagatgctagtcagcatcactggtaaagagagtcatgaaccg
caactttatatgccagtacaggacgctcaggcaaaaaaggaaagtgtgtg
tggtaagaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59185526_59186770
seq2: B6Ng01-086J13.b_45_1266

seq1  GAATTCAGTGTTTGTATGTTACTGAGGTCTGATTCTTAATTTCCCCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTTTGTATGTTACTGAGGTCTGATTCTTAATTTCCCCCTTC  50

seq1  TCTAGTGTGACAGCCCTAACCTCTACATAGTTATATACTTTAAAATAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTGTGACAGCCCTAACCTCTACATAGTTATATACTTTAAAATAATA  100

seq1  AAGGGGTGATTTGAAAAGAGTTTTCAGAAGTACATTAGTATGCACCCTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGTGATTTGAAAAGAGTTTTCAGAAGTACATTAGTATGCACCCTAT  150

seq1  AATGATTTTGGATAATCTTCATCTCCATTGTTGTTGTTGTTATTATTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTTTGGATAATCTTCATCTCCATTGTTGTTGTTGTTATTATTAAT  200

seq1  ATTTTGTTTTCCAAGACAAGGTTTCTCTATGTAACTGTCCTGGAACTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTTTCCAAGACAAGGTTTCTCTATGTAACTGTCCTGGAACTCCT  250

seq1  TCTGTAGACCAGCTTGGCCTCAGACTCAGAGATCTCACTATCTCTGCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGACCAGCTTGGCCTCAGACTCAGAGATCTCACTATCTCTGCTTC  300

seq1  CCAGAGATTGGGATTAAAGGCATGCACCACCATACCCAGCTATGAAATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATTGGGATTAAAGGCATGCACCACCATACCCAGCTATGAAATGC  350

seq1  TAATTTATTTTATGAGATACTCTTAACATTAAAACACTGTATTTTACCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATTTTATGAGATACTCTTAACATTAAAACACTGTATTTTACCTC  400

seq1  ACATATACCGTTTGCACGCAGTAGCTTTTTCTGCTGCATCTGGGATCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATACCGTTTGCACGCAGTAGCTTTTTCTGCTGCATCTGGGATCTGG  450

seq1  AACATGCTTACAATCACAGGCCTAGGACATCCTGCTTTCTTCCTCATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCTTACAATCACAGGCCTAGGACATCCTGCTTTCTTCCTCATGTG  500

seq1  CTCTTAGAAGCCTGTGCTGCTCAGCGTTTGTTTATCAATTGAGGCAGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAGAAGCCTGTGCTGCTCAGCGTTTGTTTATCAATTGAGGCAGTCA  550

seq1  GCCACCTTGGGGGAGGATGCCTCAGTGAAGACTGGCTAAACTTGTTTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTTGGGGGAGGATGCCTCAGTGAAGACTGGCTAAACTTGTTTATT  600

seq1  CAAAGCAACTTCAAGAGAAAATTTTGCAGCAGAGGAGAAGTGGTTTTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAACTTCAAGAGAAAATTTTGCAGCAGAGGAGAAGTGGTTTTTGT  650

seq1  TAGGGAAAATTATCTTCCTTCCATGAGAAAGGGAGGCAGTGTCCTTAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAAAATTATCTTCCTTCCATGAGAAAGGGAGGCAGTGTCCTTAAAT  700

seq1  GGGAAGCCATGACAATGAAGAGAGCAAGGAGTGAACAGAGGCCGCTGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCCATGACAATGAAGAGAGCAAGGAGTGAACAGAGGCCGCTGGGG  750

seq1  AGGCTCACCAGTCAAGTGACTAGTTCTTTTGGAACAGTAACCAGTTTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCACCAGTCAAGTGACTAGTTCTTTTGGAACAGTAACCAGTTTGCA  800

seq1  GAACTTCCTGCCAGCTTCCTTCCAGTTTCCAACCCAGCCTCTTCCCACTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCCTGCCAGCTTCCTTCCAGTTTCCAACCCAGCCTCTTCCCACTG  850

seq1  TTTCTCCTTTAGTTCCCCAATAGACAGCTTAAACAGTCCCTTCTTCCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCTTTAGTTCCCCAATAGACAGCTTAAACAGTCCCTTCTTCCAGT  900

seq1  TTTCCCAATACAAACAGCTCCAAGCTATAACAATCATTCTAGCCTATCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAATACAAACAGCTCCAAGCTATAACAATCATTCTAGCCTATCTG  950

seq1  TCTTCACTAACTGCCTTCTCCTCTCACTCTGCTAGCCCCTCCCCACCACA  1000
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCTTCACTAACTGCCTTCTCCTCTCACTCTGCTAG-CCCTCCCCACCACA  999

seq1  AGCCTCAGCTGGCTTTTCTATCTCCAATCCTGTTCCCAGAAATCCAAGAG  1050
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGCCTCAGCTGGCTTTTCTATCTCC-ATCCTGTTCCCAGAAATCCAAGAG  1048

seq1  GCAACCAACGCTGAAGAT-CACAGGGTCAAGCAGTTCTAGCAGCTAAGAA  1099
          |  |||||| |||| |||||||||||||||||||||||||| || |
seq2  ----CACACGCTG-AGATCCACAGGGTCAAGCAGTTCTAGCAGCT-AGGA  1092

seq1  TTCTTAAAGGGCCACTTGACAAGCAATTGGGGAACCTTTAAAGGTCCAGG  1149
      |||||||| ||||||||||||  ||||||||| ||||||||| |||   |
seq2  TTCTTAAA-GGCCACTTGACAGCCAATTGGGG-ACCTTTAAA-GTC--AG  1137

seq1  CACTTAAGATAAATCACATGGCAGTCATCACAGGGCATCTTTCCGAGACC  1199
      ||| |||||| |||| ||| ||||||||| || ||||||||| |||||||
seq2  CACCTAAGATTAATC-CAT-GCAGTCATC-CAAGGCATCTTT-CGAGACC  1183

seq1  TGCTCATAGAGCACGATCCTCCTTTTTTCCATGGTTTCTCTTATGT  1245
      || |||||| || |||||||||  || ||||||  |||||||||||
seq2  TG-TCATAG-GC-CGATCCTCC--TTATCCATG--TTCTCTTATGT  1222