BAC Information

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BAC

Clone NameB6Ng01-087I15
Chromosome18 (Build37)
Map Location 66,675,741 - 66,792,946
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042820, Zfp532, 5330437I02Rik, Sec11c, Grp, Rax, Cplx4, Lman1, Ccbe1, Pmaip1, LOC100042852
Downstream geneMc4r, Gnal, Chmp1b, Mppe1, Impa2, B430212C06Rik, Cidea, Tubb6, Afg3l2, Slmo1, Spire1, Cep76
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087I15.bB6Ng01-087I15.g
ACCDH900636DH900637
length1,2131,136
definitionDH900636|Mus musculus domesticus DNA, BAC clone: B6Ng01-087I15, 5' end.DH900637|Mus musculus domesticus DNA, BAC clone: B6Ng01-087I15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,675,741 - 66,676,973)(66,791,819 - 66,792,946)
sequence
gaattccacgcgtccttcgggttcctggggctcagtttacttaccagtga
ccccactgaggtccttgcaaggcctcccttttctttggctctcttactca
gctacaactattggggggaaatacataggggaagcaaccgaatgaataaa
aatgcatccctaatcagacaacaaagaatgtcggtaatgccactgtccca
tctggtctgatagggtggcttttcagtctgataaggtccaaagcaaacaa
acagcgtttcacagagctctgcagaaaacacctccagcctcagaacagag
gctttgaagccaaggttaaataacttcttgggcaaaacaggatttttttg
tttgtttgcttttttgttttttggttttttgggacagggtttctctgtat
agccctggctgtcctaaaactcactctgtagaccaggctggcctcgaact
cagaaatctgcctgcctctgcctcccaagtgctgggattaaaggcgtgaa
ccaccacgcccggcaaaacaggatttttacaaaagcattttagggaaaat
aatgaaaacgctaagttatgctgcatttggaatatgtaaatgtaatgaag
tgtgaggtgttcaccctcattgagctagccttcatgatgctctggataga
ggcattgtttctctctgtttttaaaaaattaattaattaattaatatgat
gagcacgctgtagctgtctttagacacaacagaagagggcatcagatctc
attactgatggttgagtcaccatttggttgctgggattgaactcgggacc
tctggaagaacagccagtgctctgaaccactgagccatctctccagcctt
ctctctgtcttttaatttaatacagttatttttccagatgtacagttgac
tgctccttttcatgcacctttgccagtagctgggccatctccaccctttg
tgtttcagttggaaagtacttgagctctgtgcttcgaaaccagcttggta
agtctgtcactaagtagtagctcctgaggccgtgggggtgaagaatccct
tcagcatctctgaagcttcagcggggagcaataacttagactggtccctt
cttactgaggtctttgtagccttgtccaaccggactaagttgtggacctg
gcctgactccgcattgaccactgctctcggctactgaactttacgggact
tcttggctgactt
gaattcctgccttggccttactacatgatggacggtaacctgtaataaga
aatatgccttttcttcctcattttgtatttgctcatggtgtgtatgacag
caatagaaaagcaaacaagaatgctgtaaatatatataatatagatgtag
acaaaggaagtaaaaggcctattaatccccctccccaatgtattttggtg
cttctgatttttgtttatttaattaattggttttcattattatgaatgct
ataacataaaacaaccttgagtgcatatttgataaaacctctgcttcttg
tttgtagaaagttgaaaaaaataatattcctacacattttgatggctgct
acaaaattgcccttccagattgatacagcagtttaggttttgtcaacacg
tggggatgatttaagacacaggggtgtcttaaataacgatgtgaagttaa
gaaacccacaaagtcaagttcttcctctcttgtaagtgaagctagccaca
cagaccagaaaccaccccacccttgataaacattgaatgactgttgcatt
tacttaaagttttcaatatatgtgaatatgaattagttatggctcccact
ctggagtgtgctcaaattagagggacaatatgaagaacaaaacaccttgc
atgcaacctgagaccagacaggtcatgggcctaggcaaacccaatactat
tgctctcctaaaaggacctagcaatagcatgacttctaatgacatattgc
tctccctatggatcggtgccttgctcagaggctacatccactccagtagt
gacatgcatgacaggccaaaagcctggatgcagtcctgagatgaagagtt
tcacggaaacttagtctcctggaactgtggcattccatagcacgtatgct
ccaattttgtccttgcaaatggatctgtgtgcttcctttcagtattgttt
tgtatagtgcctccaagcaatgacttgccaaatacctaagcaaatcgaac
tttgcttcctggcttcacaatgctactagtagtctttggagccaaccctg
ggcttggatcagtaagatgttgctattcagtgaacattcagatgctttgt
attgtagagaaagaatagtgaggaaatcagccttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_66675741_66676973
seq2: B6Ng01-087I15.b_46_1258

seq1  GAATTCCACGCGTCCTTCGGGTTCCTGGGGCTCAGTTTACTTACCAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACGCGTCCTTCGGGTTCCTGGGGCTCAGTTTACTTACCAGTGA  50

seq1  CCCCACTGAGGTCCTTGCAAGGCCTCCCTTTTCTTTGGCTCTCTTACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACTGAGGTCCTTGCAAGGCCTCCCTTTTCTTTGGCTCTCTTACTCA  100

seq1  GCTACAACTATTGGGGGGAAATACATAGGGGAAGCAACCGAATGAATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAACTATTGGGGGGAAATACATAGGGGAAGCAACCGAATGAATAAA  150

seq1  AATGCATCCCTAATCAGACAACAAAGAATGTCGGTAATGCCACTGTCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCATCCCTAATCAGACAACAAAGAATGTCGGTAATGCCACTGTCCCA  200

seq1  TCTGGTCTGATAGGGTGGCTTTTCAGTCTGATAAGGTCCAAAGCAAACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCTGATAGGGTGGCTTTTCAGTCTGATAAGGTCCAAAGCAAACAA  250

seq1  ACAGCGTTTCACAGAGCTCTGCAGAAAACACCTCCAGCCTCAGAACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCGTTTCACAGAGCTCTGCAGAAAACACCTCCAGCCTCAGAACAGAG  300

seq1  GCTTTGAAGCCAAGGTTAAATAACTTCTTGGGCAAAACAGGATTTTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGAAGCCAAGGTTAAATAACTTCTTGGGCAAAACAGGATTTTTTTG  350

seq1  TTTGTTTGCTTTTTTGTTTTTTGGTTTTTTGGGACAGGGTTTCTCTGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGCTTTTTTGTTTTTTGGTTTTTTGGGACAGGGTTTCTCTGTAT  400

seq1  AGCCCTGGCTGTCCTAAAACTCACTCTGTAGACCAGGCTGGCCTCGAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGGCTGTCCTAAAACTCACTCTGTAGACCAGGCTGGCCTCGAACT  450

seq1  CAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGAA  500

seq1  CCACCACGCCCGGCAAAACAGGATTTTTACAAAAGCATTTTAGGGAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACGCCCGGCAAAACAGGATTTTTACAAAAGCATTTTAGGGAAAAT  550

seq1  AATGAAAACGCTAAGTTATGCTGCATTTGGAATATGTAAATGTAATGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAACGCTAAGTTATGCTGCATTTGGAATATGTAAATGTAATGAAG  600

seq1  TGTGAGGTGTTCACCCTCATTGAGCTAGCCTTCATGATGCTCTGGATAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGTGTTCACCCTCATTGAGCTAGCCTTCATGATGCTCTGGATAGA  650

seq1  GGCATTGTTTCTCTCTGTTTTTAAAAAATTAATTAATTAATTAATATGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTGTTTCTCTCTGTTTTTAAAAAATTAATTAATTAATTAATATGAT  700

seq1  GAGCACGCTGTAGCTGTCTTTAGACACAACAGAAGAGGGCATCAGATCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACGCTGTAGCTGTCTTTAGACACAACAGAAGAGGGCATCAGATCTC  750

seq1  ATTACTGATGGTTGAGTCACCATTTGGTTGCTGGGATTGAACTCGGGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGATGGTTGAGTCACCATTTGGTTGCTGGGATTGAACTCGGGACC  800

seq1  TCTGGAAGAACAGCCAGTGCTCTGAACCACTGAGCCATCTCTCCAGCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAGAACAGCCAGTGCTCTGAACCACTGAGCCATCTCTCCAGCCTT  850

seq1  CTCTCTGTCTTTTAATTTAATACAGTTATTTTTCCAGATGTACAGTTGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGTCTTTTAATTTAATACAGTTATTTTTCCAGATGTACAGTTGAC  900

seq1  TGCTCCTTTTCATGCACCTTTGCCAGTAGCTGGGCCATCTCCACCCTTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTTTTCATGCACCTTTGCCAGTAGCTGGGCCATCTCCACCCTTTG  950

seq1  TGTTTCAGGTTGGAAAGTACTTGAGCTCTGTGCTTCGAAACCAGCTTGGT  1000
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCA-GTTGGAAAGTACTTGAGCTCTGTGCTTCGAAACCAGCTTGGT  999

seq1  AAGTCTGTCACTAAGTAAGTAGCTCCTGAAGGCCGTGGGGGTGAAGAAAC  1050
      |||||||||||||||| ||||||||||| ||||||||||||||||||| |
seq2  AAGTCTGTCACTAAGT-AGTAGCTCCTG-AGGCCGTGGGGGTGAAGAATC  1047

seq1  CCTTCAGCATCTCTGAAGCTCCAGC-GGGAGCAATAAACTTAAGACTGGG  1099
      |||||||||||||||||||| |||| ||||||||| ||||| ||||||| 
seq2  CCTTCAGCATCTCTGAAGCTTCAGCGGGGAGCAAT-AACTT-AGACTGGT  1095

seq1  CCCTTCCTTACTGAGGGTCTTTGTAGCTTTGTCAGACAGGACTAGTCTGT  1149
      ||||| |||||||| |||||||||||| |||||  || ||||||   |||
seq2  CCCTT-CTTACTGA-GGTCTTTGTAGCCTTGTCCAACCGGACTAAGTTGT  1143

seq1  TGACCCTGCCTGGAACTCCGCCTTTGGACCACTGCTCTCGGCCTTACCCC  1199
       ||||  |||||  ||||||| ||  ||||||||||||||||  ||   |
seq2  GGACCTGGCCTG--ACTCCGCATT--GACCACTGCTCTCGGC--TA---C  1184

seq1  TGAACTCTTTTACTGGGTCTTTCTTGGCTGACTT  1233
      |||||   ||||| ||| | ||||||||||||||
seq2  TGAAC---TTTAC-GGGAC-TTCTTGGCTGACTT  1213

seq1: chr18_66791819_66792946
seq2: B6Ng01-087I15.g_86_1201 (reverse)

seq1  TAAAGCCTGATTTCTTTCACTA-TCTCTCT-TACAATACTAGAGGCAATT  48
      ||||| ||||||||  |||||| ||| ||| ||||||||   | |||  |
seq2  TAAAGGCTGATTTC-CTCACTATTCTTTCTCTACAATAC--AAAGCA--T  45

seq1  CTGAATG-TCACTGAATAGGCAACATTCTTACTGAATTCCAAGCCCAGGG  97
      ||||||| |||||||||| |||||| |||||||||  |||||||||||||
seq2  CTGAATGTTCACTGAATA-GCAACA-TCTTACTGA--TCCAAGCCCAGGG  91

seq1  TTGGCT-CAAAGACTACCTAGTAGGCATTGGTGAAGGCCAGGAAGCAAAG  146
      |||||| ||||||||| |||||| ||||| ||||| ||||||||||||||
seq2  TTGGCTCCAAAGACTA-CTAGTA-GCATT-GTGAA-GCCAGGAAGCAAAG  137

seq1  TTCGATTTTGCTTAGGTATTTGGCAAGTCATTGCTTGGAGGCACCTATAA  196
      ||||| ||||||||||||||||||||||||||||||||||||| |||| |
seq2  TTCGA-TTTGCTTAGGTATTTGGCAAGTCATTGCTTGGAGGCA-CTAT-A  184

seq1  CAAAACAATACTGAAAGGAAGCACACAGATCCATTTGCAAGGACAAAATT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAATACTGAAAGGAAGCACACAGATCCATTTGCAAGGACAAAATT  234

seq1  GGAGCATACGTGCTATGGAATGCCACAGTTCCAGGAGACTAAGTTTCCGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATACGTGCTATGGAATGCCACAGTTCCAGGAGACTAAGTTTCCGT  284

seq1  GAAACTCTTCATCTCAGGACTGCATCCAGGCTTTTGGCCTGTCATGCATG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTCTTCATCTCAGGACTGCATCCAGGCTTTTGGCCTGTCATGCATG  334

seq1  TCACTACTGGAGTGGATGTAGCCTCTGAGCAAGGCACCGATCCATAGGGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTACTGGAGTGGATGTAGCCTCTGAGCAAGGCACCGATCCATAGGGA  384

seq1  GAGCAATATGTCATTAGAAGTCATGCTATTGCTAGGTCCTTTTAGGAGAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATATGTCATTAGAAGTCATGCTATTGCTAGGTCCTTTTAGGAGAG  434

seq1  CAATAGTATTGGGTTTGCCTAGGCCCATGACCTGTCTGGTCTCAGGTTGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGTATTGGGTTTGCCTAGGCCCATGACCTGTCTGGTCTCAGGTTGC  484

seq1  ATGCAAGGTGTTTTGTTCTTCATATTGTCCCTCTAATTTGAGCACACTCC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGGTGTTTTGTTCTTCATATTGTCCCTCTAATTTGAGCACACTCC  534

seq1  AGAGTGGGAGCCATAACTAATTCATATTCACATATATTGAAAACTTTAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGGAGCCATAACTAATTCATATTCACATATATTGAAAACTTTAAG  584

seq1  TAAATGCAACAGTCATTCAATGTTTATCAAGGGTGGGGTGGTTTCTGGTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCAACAGTCATTCAATGTTTATCAAGGGTGGGGTGGTTTCTGGTC  634

seq1  TGTGTGGCTAGCTTCACTTACAAGAGAGGAAGAACTTGACTTTGTGGGTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGGCTAGCTTCACTTACAAGAGAGGAAGAACTTGACTTTGTGGGTT  684

seq1  TCTTAACTTCACATCGTTATTTAAGACACCCCTGTGTCTTAAATCATCCC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACTTCACATCGTTATTTAAGACACCCCTGTGTCTTAAATCATCCC  734

seq1  CACGTGTTGACAAAACCTAAACTGCTGTATCAATCTGGAAGGGCAATTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGTTGACAAAACCTAAACTGCTGTATCAATCTGGAAGGGCAATTTT  784

seq1  GTAGCAGCCATCAAAATGTGTAGGAATATTATTTTTTTCAACTTTCTACA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGCCATCAAAATGTGTAGGAATATTATTTTTTTCAACTTTCTACA  834

seq1  AACAAGAAGCAGAGGTTTTATCAAATATGCACTCAAGGTTGTTTTATGTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAAGCAGAGGTTTTATCAAATATGCACTCAAGGTTGTTTTATGTT  884

seq1  ATAGCATTCATAATAATGAAAACCAATTAATTAAATAAACAAAAATCAGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATTCATAATAATGAAAACCAATTAATTAAATAAACAAAAATCAGA  934

seq1  AGCACCAAAATACATTGGGGAGGGGGATTAATAGGCCTTTTACTTCCTTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCAAAATACATTGGGGAGGGGGATTAATAGGCCTTTTACTTCCTTT  984

seq1  GTCTACATCTATATTATATATATTTACAGCATTCTTGTTTGCTTTTCTAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTACATCTATATTATATATATTTACAGCATTCTTGTTTGCTTTTCTAT  1034

seq1  TGCTGTCATACACACCATGAGCAAATACAAAATGAGGAAGAAAAGGCATA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCATACACACCATGAGCAAATACAAAATGAGGAAGAAAAGGCATA  1084

seq1  TTTCTTATTACAGGTTACCGTCCATCATGTAG  1128
      ||||||||||||||||||||||||||||||||
seq2  TTTCTTATTACAGGTTACCGTCCATCATGTAG  1116