BAC Information

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BAC

Clone NameB6Ng01-088D09
Chromosome18 (Build37)
Map Location 22,515,643 - 22,662,242
singlet/doubletdoublet
Overlap geneLOC100040547, Asxl3
Upstream geneLOC225264, Klhl14, 4921528I01Rik, LOC546708
Downstream geneNol4, LOC100040579, LOC665797, Dtna
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088D09.bB6Ng01-088D09.g
ACCDH901130DH901131
length1,2501,102
definitionDH901130|Mus musculus domesticus DNA, BAC clone: B6Ng01-088D09, 5' end.DH901131|Mus musculus domesticus DNA, BAC clone: B6Ng01-088D09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,660,981 - 22,662,242)(22,515,643 - 22,516,753)
sequence
gaattcaaagcattaaacaaacactgcaatataaactaatattcaaactc
atatctaataaaataatcttttaatttatttgtgtgtgtgagagacacat
acacagagaaacacacacacacatatacacagaggtggcaggggaagtgg
gggcaaggcagcatctcatatagtcaaggcaggcctcaagttgtagctaa
tgctgaattaaaactcctgttcttcctccttcaatatccatgtgatgaca
ccatagactaccaaacttaacacagtctttcacattatcttctttttctt
ttttttctgattttgtatctcttccaggtggtttccctacatagtaagga
catgtattatcagaagagggaagagtatgctgagagtagaaactggccaa
gcaacagcattgcatctagaaacacaatcaacttcaatgtcattcaacag
acagcagaaagtggttcaacgtaaagtcaaaacctgatgaaaagaaccaa
gtgagtgtctataggtaaacagtgtgcttgtttagacagtgtcaaggtag
tctccttggaactcactattaataacgaactaactgtggtcacatgtgga
ggaagtggggaagagcaagccaaggaataaaagatgacttagtgacctag
ggaagcaggcaagaggcagtccaatatcatgggcaggatgttgggcaata
agactgctcaccgatggagacagaaagctagtcaggataacatctgatat
ttcaaaggaacaggtcagacattttgtatgtgtgcaaatatgctagagca
gaactgacagcaataaaaacaactttcctgtgtgaatttaatttttgtct
ctgcattggataatttttgtctctgcattggaaaagaaaaaaagaaacat
gaagttatttctaagaatgcattttatttattttgatctatgtaaaatgt
cattttaacatctaatttcaatattattcttgagatgttttatattctcc
ctgaaaattatttgctatcatttattcattggttcacggtctacatataa
aacacatacacacacacaagcagccacatctccaggtatgagcagctctg
tgactggctattggcccctattacggacgttgatctttagaccaggactt
actcgaatcctaatgtaagtgattgctaattccagagaaggatgataagc
cgtggactcaatgatagaatgggtgatggttccacctatatatcccaccc

gaattctctgtcatgcctaccatggcaggctacatggtcataggcccaaa
tgtcacagggactgaccattggtgaattgaagcctttaaaaagaatgagc
caaaataacttttttttctttttaataagttaataacttccagaatttct
tatagtaatgaaaactgagctaattcatgagccaccagtccacagtaatg
tttcatgaaaaccagttattattgggtgtttaaaagcctgacactgaagt
atacaacttacatgtattataatgctgaatcctgtaaacaaacccaggag
acatttgtcatatcacttgtaatccaaaagaaaaaaaaaaaacaagccaa
aaggaagacaagagaagctgaagaattaattggtttgtcgtgtttttctg
agttgcaactgaagtaagtttagctcaatctaataatctaatcatgtgcc
tcagtaagtggctggatgttggaggacgtcacccatgcatttgcccatct
cccagtgtcttggtgaggaccgactgttctaggttttctgcacctacatc
cttcaagctgagctgtgctatgattaagcacatctgtgttcttgcacttt
cttctcctttactttttcttttctcctcctgtcactttaaaatgtcaatt
tcagagaaggtttcatatcctttttacccaggagaaaggccagtggccaa
gattaaggtagtatgactacctggcagagaggaatgtccctggtattgag
gaaaggcaagcggcaggcatgcgtagggagtgctgtaggagtaccatttc
cttagttacagggatggtggatgcactcactccgttgtaaatgggacagg
agtgaattacatgtaaagtctacacagcatcactcagggtttctggtatt
gttttatgatggtagagttgaggcttctcttgcaaagacactaaacctcc
ctctggtaagttcctactaaaacccactttcctaatgtagagcaaatttg
catgatggttctgttctatttttcccccagatggatcgcttagagtacct
acaaggtgtctctgtatagatttataggcataatttaaatagctcagatc
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22660981_22662242
seq2: B6Ng01-088D09.b_44_1293 (reverse)

seq1  GGGTGGGAT-TATAGGTGTGGACAACTACACCATCTATCATATTGAGT-C  48
      ||||||||| |||||||| | || |  || |  ||||||  ||||||| |
seq2  GGGTGGGATATATAGGTG-GAACCATCACCCATTCTATC--ATTGAGTCC  47

seq1  ACAGCTTTTATCATCATTCTCATGAATTATAGCAATCAC-TACATATTAA  97
      || ||  |||||||| |||||  ||||  |||||||||| ||||   | |
seq2  ACGGC--TTATCATCCTTCTCTGGAAT--TAGCAATCACTTACA---TTA  90

seq1  TGATTCTGAGT-AGTCCTTGTCTAAAGATCCACTGTTCGTTATAGTGGCC  146
       ||||| |||| |||||| ||||||||||| || || ||| |||| ||||
seq2  GGATTC-GAGTAAGTCCTGGTCTAAAGATCAAC-GTCCGTAATAGGGGCC  138

seq1  AATAGCCAGTCACAGAGCTGCTCATAACTGGAGATGTGGCTGCTTTGTGT  196
      |||||||||||||||||||||||||| |||||||||||||||| ||||| 
seq2  AATAGCCAGTCACAGAGCTGCTCATACCTGGAGATGTGGCTGC-TTGTG-  186

seq1  TGTGTGTATGTGTTTTATATGTAGACCGTGAACCAATGAATAAATGAATA  246
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGTGTGTATGTGTTTTATATGTAGACCGTGAACCAATGAATAAATG-ATA  235

seq1  GCAAATAATTTTCAGGGAGAATATAAAACATCTCAAGAATAATATTTGAA  296
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GCAAATAATTTTCAGGGAGAATATAAAACATCTCAAGAATAATA-TTGAA  284

seq1  ATTAGATGTTAAAATGACATTTTACATAGATCAAAATAAATAAAATGCAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATGTTAAAATGACATTTTACATAGATCAAAATAAATAAAATGCAT  334

seq1  TCTTAGAAATAACTTCATGTTTCTTTTTTTCTTTTCCAATGCAGAGACAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAAATAACTTCATGTTTCTTTTTTTCTTTTCCAATGCAGAGACAA  384

seq1  AAATTATCCAATGCAGAGACAAAAATTAAATTCACACAGGAAAGTTGTTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATCCAATGCAGAGACAAAAATTAAATTCACACAGGAAAGTTGTTT  434

seq1  TTATTGCTGTCAGTTCTGCTCTAGCATATTTGCACACATACAAAATGTCT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCTGTCAGTTCTGCTCTAGCATATTTGCACACATACAAAATGTCT  484

seq1  GACCTGTTCCTTTGAAATATCAGATGTTATCCTGACTAGCTTTCTGTCTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTTCCTTTGAAATATCAGATGTTATCCTGACTAGCTTTCTGTCTC  534

seq1  CATCGGTGAGCAGTCTTATTGCCCAACATCCTGCCCATGATATTGGACTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGGTGAGCAGTCTTATTGCCCAACATCCTGCCCATGATATTGGACTG  584

seq1  CCTCTTGCCTGCTTCCCTAGGTCACTAAGTCATCTTTTATTCCTTGGCTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGCCTGCTTCCCTAGGTCACTAAGTCATCTTTTATTCCTTGGCTT  634

seq1  GCTCTTCCCCACTTCCTCCACATGTGACCACAGTTAGTTCGTTATTAATA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCCCCACTTCCTCCACATGTGACCACAGTTAGTTCGTTATTAATA  684

seq1  GTGAGTTCCAAGGAGACTACCTTGACACTGTCTAAACAAGCACACTGTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCCAAGGAGACTACCTTGACACTGTCTAAACAAGCACACTGTTT  734

seq1  ACCTATAGACACTCACTTGGTTCTTTTCATCAGGTTTTGACTTTACGTTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATAGACACTCACTTGGTTCTTTTCATCAGGTTTTGACTTTACGTTG  784

seq1  AACCACTTTCTGCTGTCTGTTGAATGACATTGAAGTTGATTGTGTTTCTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTTTCTGCTGTCTGTTGAATGACATTGAAGTTGATTGTGTTTCTA  834

seq1  GATGCAATGCTGTTGCTTGGCCAGTTTCTACTCTCAGCATACTCTTCCCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAATGCTGTTGCTTGGCCAGTTTCTACTCTCAGCATACTCTTCCCT  884

seq1  CTTCTGATAATACATGTCCTTACTATGTAGGGAAACCACCTGGAAGAGAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATAATACATGTCCTTACTATGTAGGGAAACCACCTGGAAGAGAT  934

seq1  ACAAAATCAGAAAAAAAAGAAAAAGAAGATAATGTGAAAGACTGTGTTAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATCAGAAAAAAAAGAAAAAGAAGATAATGTGAAAGACTGTGTTAA  984

seq1  GTTTGGTAGTCTATGGTGTCATCACATGGATATTGAAGGAGGAAGAACAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTAGTCTATGGTGTCATCACATGGATATTGAAGGAGGAAGAACAG  1034

seq1  GAGTTTTAATTCAGCATTAGCTACAACTTGAGGCCTGCCTTGACTATATG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTAATTCAGCATTAGCTACAACTTGAGGCCTGCCTTGACTATATG  1084

seq1  AGATGCTGCCTTGCCCCCACTTCCCCTGCCACCTCTGTGTATATGTGTGT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGCCTTGCCCCCACTTCCCCTGCCACCTCTGTGTATATGTGTGT  1134

seq1  GTGTGTTTCTCTGTGTATGTGTCTCTCACACACACAAATAAATTAAAAGA  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTCTCTGTGTATGTGTCTCTCACACACACAAATAAATTAAAAGA  1184

seq1  TTATTTTATTAGATATGAGTTTGAATATTAGTTTATATTGCAGTGTTTGT  1246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATTAGATATGAGTTTGAATATTAGTTTATATTGCAGTGTTTGT  1234

seq1  TTAATGCTTTGAATTC  1262
      ||||||||||||||||
seq2  TTAATGCTTTGAATTC  1250

seq1: chr18_22515643_22516753
seq2: B6Ng01-088D09.g_70_1171

seq1  GAATTCTCTGTCATGCCTACCATGGCAGGCTACATGGTCATAGGCCCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTCATGCCTACCATGGCAGGCTACATGGTCATAGGCCCAAA  50

seq1  TGTCACAGGGACTGACCATTGGTGAATTGAAGCCTTTAAAAAGAATGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAGGGACTGACCATTGGTGAATTGAAGCCTTTAAAAAGAATGAGC  100

seq1  CAAAATAACTTTTTTTTCTTTTTAATAAGTTAATAACTTCCAGAATTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATAACTTTTTTTTCTTTTTAATAAGTTAATAACTTCCAGAATTTCT  150

seq1  TATAGTAATGAAAACTGAGCTAATTCATGAGCCACCAGTCCACAGTAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTAATGAAAACTGAGCTAATTCATGAGCCACCAGTCCACAGTAATG  200

seq1  TTTCATGAAAACCAGTTATTATTGGGTGTTTAAAAGCCTGACACTGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGAAAACCAGTTATTATTGGGTGTTTAAAAGCCTGACACTGAAGT  250

seq1  ATACAACTTACATGTATTATAATGCTGAATCCTGTAAACAAACCCAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACTTACATGTATTATAATGCTGAATCCTGTAAACAAACCCAGGAG  300

seq1  ACATTTGTCATATCACTTGTAATCCAAAAGAAAAAAAAAAAACAAGCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTGTCATATCACTTGTAATCCAAAAGAAAAAAAAAAAACAAGCCAA  350

seq1  AAGGAAGACAAGAGAAGCTGAAGAATTAATTGGTTTGTCGTGTTTTTCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGACAAGAGAAGCTGAAGAATTAATTGGTTTGTCGTGTTTTTCTG  400

seq1  AGTTGCAACTGAAGTAAGTTTAGCTCAATCTAATAATCTAATCATGTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCAACTGAAGTAAGTTTAGCTCAATCTAATAATCTAATCATGTGCC  450

seq1  TCAGTAAGTGGCTGGATGTTGGAGGACGTCACCCATGCATTTGCCCATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAAGTGGCTGGATGTTGGAGGACGTCACCCATGCATTTGCCCATCT  500

seq1  CCCAGTGTCTTGGTGAGGACCGACTGTTCTAGGTTTTCTGCACCTACATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGTCTTGGTGAGGACCGACTGTTCTAGGTTTTCTGCACCTACATC  550

seq1  CTTCAAGCTGAGCTGTGCTATGATTAAGCACATCTGTGTTCTTGCACTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGCTGAGCTGTGCTATGATTAAGCACATCTGTGTTCTTGCACTTT  600

seq1  CTTCTCCTTTACTTTTTCTTTTCTCCTCCTGTCACTTTAAAATGTCAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCTTTACTTTTTCTTTTCTCCTCCTGTCACTTTAAAATGTCAATT  650

seq1  TCAGAGAAGGTTTCATATCCTTTTTACCCAGGAGAAAGGCCAGTGGCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAAGGTTTCATATCCTTTTTACCCAGGAGAAAGGCCAGTGGCCAA  700

seq1  GATTAAGGTAGTATGACTACCTGGCAGAGAGGAATGTCCCTGGTATTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAGGTAGTATGACTACCTGGCAGAGAGGAATGTCCCTGGTATTGAG  750

seq1  GAAAGGCAAGCGGCAGGCATGCGTAGGGAGTGCTGTAGGAGTACCATTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCAAGCGGCAGGCATGCGTAGGGAGTGCTGTAGGAGTACCATTTC  800

seq1  CTTAGTTACAGGGATGGTGGATGCACTCACTCCGTTGTAAATGGGACAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTACAGGGATGGTGGATGCACTCACTCCGTTGTAAATGGGACAGG  850

seq1  AGTGAATTACATGTAAAGTCTACACAGCATCACTCAGGGTTTCTGGTATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATTACATGTAAAGTCTACACAGCATCACTCAGGGTTTCTGGTATT  900

seq1  GTTTTTATGATGGTAGAGTTGAGGCTTCTCTTGCAAAGACACTAAACCTC  950
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-TTTTATGATGGTAGAGTTGAGGCTTCTCTTGCAAAGACACTAAACCTC  949

seq1  CCTCTGGTAAGTTCCTACTAAAACCCACTTTCCTAATGTAGAGCCAAATT  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCTCTGGTAAGTTCCTACTAAAACCCACTTTCCTAATGTAGAG-CAAATT  998

seq1  TTGCCATGAATGGTTTCTGTTCTATTTTTCCCCACAGATGGATCGCTTTA  1050
      |   |||| |||| ||||||||||||||||||| |||||||||||| |||
seq2  T--GCATG-ATGG-TTCTGTTCTATTTTTCCCC-CAGATGGATCGC-TTA  1042

seq1  GAGTTACCTACAAGTGGTCTCTGTATAGATTTATA-GCATAATTTAAAAT  1099
      ||| ||||||||||  ||||||||||||||||||| ||||||||| ||||
seq2  GAG-TACCTACAAGGTGTCTCTGTATAGATTTATAGGCATAATTT-AAAT  1090

seq1  AGCTCAGATCTG  1111
      ||||||||||||
seq2  AGCTCAGATCTG  1102