BAC Information

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BAC

Clone NameB6Ng01-091P23
Chromosome18 (Build37)19 (Build37)
Map Location 49,554,331 - 49,554,85159,967,279 - 59,968,409
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC545470
Downstream geneDtwd2, Dmxl1, Tnfaip8, Hsd17b4, LOC626721, LOC667233, Gm93
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091P23.bB6Ng01-091P23.g
ACCDH903880DH903881
length9791,121
definitionDH903880|Mus musculus domesticus DNA, BAC clone: B6Ng01-091P23, 5' end.DH903881|Mus musculus domesticus DNA, BAC clone: B6Ng01-091P23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(49,554,331 - 49,554,851)(59,967,279 - 59,968,409)
sequence
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgctctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcatttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttccttccgtctactcctcttgggtgaatttgcttcctttttttctaggg
ctttagatgtgttgtcaagctgctagtatgtgctgtctcccgtttcttct
ggaggcactcagcgctatgagtttccctc
gaattcagtggcctcattcttagaaacagggtgtattggatgacccatca
ttgaaaactgaagtatgcaattgatattcaagtgggtcagaacaaagagt
gtgaagctgaaacacaaaagcaaaatggcccctgtttgcaatcatggtgt
aaagaattcatgagtatagagggcatttttgttttacttcttctgtaagt
tttaacattttcaaaataaacgagaaaagagaacatctgatttgatcttc
acagagacacagggttatccagtgtcgagcaaaacagtcgaaaacagtgg
ttcttaaccttcctgttaaacaccccagggtcacttaccagatatttaca
ttatgattcataacagtagcaaaattacagttatgaagaagtaatgaaaa
taaccttatggttgggggtcaccacaatatgaggaactgtgttaaagggt
aacaacattagggaaggttgagagccactgatctaaaagaagagaaagat
tcattaggctgcatgctagacctttctaccaacccacctggcttggcatt
tacccccatatcctatccagttaacaggctcatcccttcagtgtttccta
ggccttgagacctcttgtcagcacctgcagctccctccctccctccctcc
cttcctcccagtttccctttcttcccttcttttgccagaaatcccaccct
gcatccccctgtgctgcttcacaagttcctctagggattgcttccatcag
gggtcccaggtgacttgttttgctcaacctttgcccctggcctatatctt
tgactccccaggtgtgtctgctctcagcttcaagcttccctcccccatct
aattaaacccaagtggtgccacctggccttttccttccttgttggggcct
ctcagtctggtctctttccccaggttccttctatctctgcccttgcctgc
ctcccttttctgagggtgctggtgggtctccaggtgttcagtcttcagct
gtcacctggagtgggtgatggctttgagcaagcaggatgctgctcctcag
gcgctggtctcttccagaaacctgacagaataggtggatcttcagccctc
aaagctgaatacaaattggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_49554331_49554851
seq2: B6Ng01-091P23.b_47_567 (reverse)

seq1  AAACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCC  50

seq1  CAACCAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAAAAAAAGCCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAG  100

seq1  ACCTTCAAAGAAGATCTAATTCCAATTCTGCACAAACTATTTCACAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCAAAGAAGATCTAATTCCAATTCTGCACAAACTATTTCACAAAAT  150

seq1  AGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTAGAAGGTACTCTACCCAACTCATTTTATGAAGCCACTATTACTC  200

seq1  TGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACCTAAACCACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCA  250

seq1  ATTTCTCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTTATGAATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAA  300

seq1  CCGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAATCCAAGAACACATTAAAGCAATCATCCATCCTGACCAAGTAGGTT  350

seq1  TTATTCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCAGGGATGCAGGGATGGTTTAATATACGAAAATCCATCAATGTA  400

seq1  ATCCATTATATAAACAAACTCAAAGACAAAAACTACATGATCATCTCGTT  450
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATCCATTATATAAACAAACTCAAAGACAAAAACCACATGATCATCTCGTT  450

seq1  AGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCAGAAAAAGCATTTGACAAGATCCAACACCCATTCATGATAAAAG  500

seq1  TTTTGGAAAGATCAGGAATTC  521
      |||||||||||||||||||||
seq2  TTTTGGAAAGATCAGGAATTC  521

seq1: chr19_59967279_59968409
seq2: B6Ng01-091P23.g_68_1188 (reverse)

seq1  CACCAATTTGGTATTCAGGCTGTGAGGGGCAAGGAAGATCCACCTA-TCT  49
      ||||||||| ||||||| ||| ||||||     ||||||||||||| |||
seq2  CACCAATTT-GTATTCA-GCTTTGAGGG---CTGAAGATCCACCTATTCT  45

seq1  GTCAGGGTATCTGTGAAGAGACCAGCGCCTGGAGGAGCAGGCCTTCCTGC  99
      |||| ||| |||| |||||||||||||||| |||||||||  | ||||||
seq2  GTCA-GGTTTCTG-GAAGAGACCAGCGCCT-GAGGAGCAG--CATCCTGC  90

seq1  TTGCTTCAAAGGCCATCACCCACTCCA-GTGACAGCTGAAGACTGGACAC  148
      |||| ||||| |||||||||||||||| ||||||||||||||||| ||||
seq2  TTGC-TCAAA-GCCATCACCCACTCCAGGTGACAGCTGAAGACTGAACAC  138

seq1  CTGGAGACCCACAGGCACCCTCAGAAAAGGGAGGGCAGGCAAGGGCAGAG  198
      ||||||||||||  |||||||||||||||||| |||||||||||||||||
seq2  CTGGAGACCCACCAGCACCCTCAGAAAAGGGA-GGCAGGCAAGGGCAGAG  187

seq1  ATAGAAGGAACCTGGGGAAAGAGACCAGACTGAGAGG-CCCAACAAGGAA  247
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  ATAGAAGGAACCTGGGGAAAGAGACCAGACTGAGAGGCCCCAACAAGGAA  237

seq1  GGAAAAGGCCAGGTGGCACCACTTGGGTTTAATTAGATGGGGGAGGGAAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGGCCAGGTGGCACCACTTGGGTTTAATTAGATGGGGGAGGGAAG  287

seq1  CTTGAAGCTGAGAGCAGACACACCTGGGGAGTCAAAGATATAGGCCAGGG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGCTGAGAGCAGACACACCTGGGGAGTCAAAGATATAGGCCAGGG  337

seq1  GCAAAGGTTGAGCAAAACAAGTCACCTGGGACCCCTGATGGAAGCAATCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGGTTGAGCAAAACAAGTCACCTGGGACCCCTGATGGAAGCAATCC  387

seq1  CTAGAGGAACTTGTGAAGCAGCACAGGGGGATGCAGGGTGGGATTTCTGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGGAACTTGTGAAGCAGCACAGGGGGATGCAGGGTGGGATTTCTGG  437

seq1  CAAAAGAAGGGAAGAAAGGGAAACTGGGAGGAAGGGAGGGAGGGAGGGAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAAGGGAAGAAAGGGAAACTGGGAGGAAGGGAGGGAGGGAGGGAG  487

seq1  GGAGCTGCAGGTGCTGACAAGAGGTCTCAAGGCCTAGGAAACACTGAAGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGCAGGTGCTGACAAGAGGTCTCAAGGCCTAGGAAACACTGAAGG  537

seq1  GATGAGCCTGTTAACTGGATAGGATATGGGGGTAAATGCCAAGCCAGGTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGCCTGTTAACTGGATAGGATATGGGGGTAAATGCCAAGCCAGGTG  587

seq1  GGTTGGTAGAAAGGTCTAGCATGCAGCCTAATGAATCTTTCTCTTCTTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGTAGAAAGGTCTAGCATGCAGCCTAATGAATCTTTCTCTTCTTTT  637

seq1  AGATCAGTGGCTCTCAACCTTCCCTAATGTTGTTACCCTTTAACACAGTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAGTGGCTCTCAACCTTCCCTAATGTTGTTACCCTTTAACACAGTT  687

seq1  CCTCATATTGTGGTGACCCCCAACCATAAGGTTATTTTCATTACTTCTTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATATTGTGGTGACCCCCAACCATAAGGTTATTTTCATTACTTCTTC  737

seq1  ATAACTGTAATTTTGCTACTGTTATGAATCATAATGTAAATATCTGGTAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTGTAATTTTGCTACTGTTATGAATCATAATGTAAATATCTGGTAA  787

seq1  GTGACCCTGGGGTGTTTAACAGGAAGGTTAAGAACCACTGTTTTCGACTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCCTGGGGTGTTTAACAGGAAGGTTAAGAACCACTGTTTTCGACTG  837

seq1  TTTTGCTCGACACTGGATAACCCTGTGTCTCTGTGAAGATCAAATCAGAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTCGACACTGGATAACCCTGTGTCTCTGTGAAGATCAAATCAGAT  887

seq1  GTTCTCTTTTCTCGTTTATTTTGAAAATGTTAAAACTTACAGAAGAAGTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTTTTCTCGTTTATTTTGAAAATGTTAAAACTTACAGAAGAAGTA  937

seq1  AAACAAAAATGCCCTCTATACTCATGAATTCTTTACACCATGATTGCAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAATGCCCTCTATACTCATGAATTCTTTACACCATGATTGCAAA  987

seq1  CAGGGGCCATTTTGCTTTTGTGTTTCAGCTTCACACTCTTTGTTCTGACC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGCCATTTTGCTTTTGTGTTTCAGCTTCACACTCTTTGTTCTGACC  1037

seq1  CACTTGAATATCAATTGCATACTTCAGTTTTCAATGATGGGTCATCCAAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGAATATCAATTGCATACTTCAGTTTTCAATGATGGGTCATCCAAT  1087

seq1  ACACCCTGTTTCTAAGAATGAGGCCACTGAATTC  1131
      ||||||||||||||||||||||||||||||||||
seq2  ACACCCTGTTTCTAAGAATGAGGCCACTGAATTC  1121