BAC Information

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BAC

Clone NameB6Ng01-092B02
Chromosome18 (Build37)
Map Location 85,890,069 - 86,006,492
singlet/doubletdoublet
Overlap genenone
Upstream geneB230399E16Rik, Cyb5, Fbxo15, 1700034H14Rik, LOC100039765, LOC665382
Downstream geneLOC545269, LOC545270, LOC665402, Neto1, Cbln2, LOC100039872, LOC100039881, LOC665437
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-092B02.bB6Ng01-092B02.g
ACCDH903929DH903930
length1,123391
definitionDH903929|Mus musculus domesticus DNA, BAC clone: B6Ng01-092B02, 5' end.DH903930|Mus musculus domesticus DNA, BAC clone: B6Ng01-092B02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,890,069 - 85,891,203)(86,006,096 - 86,006,492)
sequence
gaattctttgtggtctttaagcttctcatggcctggacaaagtgatattt
ttagcactggtaaaggtataataagcttaaaacttacatatagatactaa
cttcccatctttttgatatttaaaatacagggcttcattccacaactcag
gatttccttcaccttgtaacttttctggcttgaatctgagggaataggat
tattgatatgtattatcacaactagttttgtgtgaatatttaatttattc
tacaaaacaaaagctagaaattcatctaaagaatgggtgtggctttaaat
aacttttttttttaggatttaaagaaggaacattttcttcaaatagtaat
aactaaaagggcgtttcaagtttatacaaaataaaatgataaaaatctgc
atgtgtcttaaaaataacattggcagtgtattcagcacacttaaaaaatt
tagtagccattttccatcctgaagttcttgatatgtacattgaaaactga
aaaaggactcctgtgcatctttacgtccctagcccacactacaagaaagc
cagatcatccatcccaaagacctgtggagtggattaactgtatagtgcaa
tcacactgaaattttctgttttctttagctgatgtcttgttggctttgta
aagcagacttagttttagaatcaaaaattgtaagtgcaaaaatgtctgac
ctctagtataataaatgtggaatatgcatattcagggtaatctagaatga
agtctcactccttatattcaaagggacaggcactcagccttgttctagac
agattcacactcattacgtcatcacagagatagtaaataatcgatctctt
ggggattttttttttaaagtcacgtgtgaaaggtatatcaataagctaca
gattgatactttaaactatgggtaggtatctgtgctgaacggtcacaaga
gggacatgagtgtcaggacccagtagcataaagtaaaagtacctgacaca
gattatagcagtggtggtgctaatcttctttatgagcatcatttctaaaa
ggtatggtagaattaattacggtaaataagatctctatgtgcccgcttta
caccattcatttatacgacctgt
tgtaagctttattgggtcatcttagaaggaggttgaaagacagtaagggt
gagtgcaatacaaactatggaaaataaattctagagatttcagaggagaa
caacattagtaactcagctattcgccattcctgtgatgttttttgccttt
ttcctaagaacttgcgaggggttcaattaaaaggtaaagaagtaatttct
aatttctatggtagagtccatttcaaggcagcattatatgtagcctgtgg
catagttgtgtaaatatatatgtgtaaaaagttagttatatagttagaca
tatagatatatagttgttataaaattgttatagtgctgttatatggttat
atagttagttttatagtaatatagttatgtatttatatagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_85890069_85891203
seq2: B6Ng01-092B02.b_46_1168

seq1  GAATTCTTTGTGGTCTTTAAGCTTCTCATGGCCTGGACAAAGTGATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTGGTCTTTAAGCTTCTCATGGCCTGGACAAAGTGATATTT  50

seq1  TTAGCACTGGTAAAGGTATAATAAGCTTAAAACTTACATATAGATACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCACTGGTAAAGGTATAATAAGCTTAAAACTTACATATAGATACTAA  100

seq1  CTTCCCATCTTTTTGATATTTAAAATACAGGGCTTCATTCCACAACTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCATCTTTTTGATATTTAAAATACAGGGCTTCATTCCACAACTCAG  150

seq1  GATTTCCTTCACCTTGTAACTTTTCTGGCTTGAATCTGAGGGAATAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCTTCACCTTGTAACTTTTCTGGCTTGAATCTGAGGGAATAGGAT  200

seq1  TATTGATATGTATTATCACAACTAGTTTTGTGTGAATATTTAATTTATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATATGTATTATCACAACTAGTTTTGTGTGAATATTTAATTTATTC  250

seq1  TACAAAACAAAAGCTAGAAATTCATCTAAAGAATGGGTGTGGCTTTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAACAAAAGCTAGAAATTCATCTAAAGAATGGGTGTGGCTTTAAAT  300

seq1  AACTTTTTTTTTTAGGATTTAAAGAAGGAACATTTTCTTCAAATAGTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTTTTTTTAGGATTTAAAGAAGGAACATTTTCTTCAAATAGTAAT  350

seq1  AACTAAAAGGGCGTTTCAAGTTTATACAAAATAAAATGATAAAAATCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAAGGGCGTTTCAAGTTTATACAAAATAAAATGATAAAAATCTGC  400

seq1  ATGTGTCTTAAAAATAACATTGGCAGTGTATTCAGCACACTTAAAAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCTTAAAAATAACATTGGCAGTGTATTCAGCACACTTAAAAAATT  450

seq1  TAGTAGCCATTTTCCATCCTGAAGTTCTTGATATGTACATTGAAAACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGCCATTTTCCATCCTGAAGTTCTTGATATGTACATTGAAAACTGA  500

seq1  AAAAGGACTCCTGTGCATCTTTACGTCCCTAGCCCACACTACAAGAAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGACTCCTGTGCATCTTTACGTCCCTAGCCCACACTACAAGAAAGC  550

seq1  CAGATCATCCATCCCAAAGACCTGTGGAGTGGATTAACTGTATAGTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCATCCATCCCAAAGACCTGTGGAGTGGATTAACTGTATAGTGCAA  600

seq1  TCACACTGAAATTTTCTGTTTTCTTTAGCTGATGTCTTGTTGGCTTTGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACTGAAATTTTCTGTTTTCTTTAGCTGATGTCTTGTTGGCTTTGTA  650

seq1  AAGCAGACTTAGTTTTAGAATCAAAAATTGTAAGTGCAAAAATGTCTGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGACTTAGTTTTAGAATCAAAAATTGTAAGTGCAAAAATGTCTGAC  700

seq1  CTCTAGTATAATAAATGTGGAATATGCATATTCAGGGTAATCTAGAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTATAATAAATGTGGAATATGCATATTCAGGGTAATCTAGAATGA  750

seq1  AGTCTCACTCCTTATATTCAAAGGGACAGGCACTCAGCCTTGTTCTAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCACTCCTTATATTCAAAGGGACAGGCACTCAGCCTTGTTCTAGAC  800

seq1  AGATTCACACTCATTACGTCATCACAGAGATAGTAAATAATCGATCTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCACACTCATTACGTCATCACAGAGATAGTAAATAATCGATCTCTT  850

seq1  GGGGATTTTTTTTTTAAAGTCACGTGTGAAAGGTATATCAATAAGCTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTTTTTTTTTAAAGTCACGTGTGAAAGGTATATCAATAAGCTACA  900

seq1  GATTGATACTTTAAACTATGGGTAGGTATCTGTGCTGAACGGTCACAAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GATTGATACTTTAAACTATGGGTAGGTATCTGTGCTGAACGGTCACAAG-  949

seq1  AGGGACATGAGTGTCAGGGAACCCAGTAGCATAAAGTAAAAAGTTACCTG  1000
      ||||||||||||||||||  |||||||||||||||||||||   ||||||
seq2  AGGGACATGAGTGTCAGG--ACCCAGTAGCATAAAGTAAAA--GTACCTG  995

seq1  AACACAGATTTATAGCAGTG--TGTGCTAAATCTTCTTTATGAGCATCAT  1048
       ||||||| |||||||||||   ||||| |||||||||||||||||||||
seq2  -ACACAGA-TTATAGCAGTGGTGGTGCT-AATCTTCTTTATGAGCATCAT  1042

seq1  TTCTAAAAGGTTATGTAGAAATGTAATTACGGTAAAATAAGATCTCTAAT  1098
      |||||||||||   ||||||   |||||||||| ||||||||||||| ||
seq2  TTCTAAAAGGTATGGTAGAA--TTAATTACGGT-AAATAAGATCTCT-AT  1088

seq1  GTGCACGGCTTTACACCATTCATTTATACAGACCTGT  1135
      |||| | |||||||||||||||||||||| |||||||
seq2  GTGC-CCGCTTTACACCATTCATTTATAC-GACCTGT  1123

seq1: chr18_86006096_86006492
seq2: B6Ng01-092B02.g_68_464 (reverse)

seq1  ACTATATAAATACATAACTATATTACTATAAAACTAACTATATAACCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATATAAATACATAACTATATTACTATAAAACTAACTATATAACCATA  50

seq1  TAACAGCACTATAACAATTTTATAACAACTATATATCTATATGTCTAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCACTATAACAATTTTATAACAACTATATATCTATATGTCTAACT  100

seq1  ATATAACTAACTTTTTACACATATATATTTACACAACTATGCCACAGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAACTAACTTTTTACACATATATATTTACACAACTATGCCACAGGCT  150

seq1  ACATATAATGCTGCCTTGAAATGGACTCTACCATAGAAATTAGAAATTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAATGCTGCCTTGAAATGGACTCTACCATAGAAATTAGAAATTAC  200

seq1  TTCTTTACCTTTTAATTGAACCCCTCGCAAGTTCTTAGGAAAAAGGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTACCTTTTAATTGAACCCCTCGCAAGTTCTTAGGAAAAAGGCAAA  250

seq1  AAACATCACAGGAATGGCGAATAGCTGAGTTACTAATGTTGTTCTCCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCACAGGAATGGCGAATAGCTGAGTTACTAATGTTGTTCTCCTCT  300

seq1  GAAATCTCTAGAATTTATTTTCCATAGTTTGTATTGCACTCACCCTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCTCTAGAATTTATTTTCCATAGTTTGTATTGCACTCACCCTTACT  350

seq1  GTCTTTCAACCTCCTTCTAAGATGACCCAATAAAGCTTACAGAATTC  397
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCAACCTCCTTCTAAGATGACCCAATAAAGCTTACAGAATTC  397