BAC Information

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BAC

Clone NameB6Ng01-093E05
Chromosome18 (Build37)
Map Location 18,565,863 - 18,724,884
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040647
Downstream geneLOC100040658, LOC665624, LOC665629
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093E05.bB6Ng01-093E05.g
ACCDH904798DH904799
length1,029572
definitionDH904798|Mus musculus domesticus DNA, BAC clone: B6Ng01-093E05, 5' end.DH904799|Mus musculus domesticus DNA, BAC clone: B6Ng01-093E05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,724,346 - 18,724,884)(18,565,863 - 18,566,440)
sequence
gaattcaatgaatttggttactttctaataatatacatttaaagactatg
aaaaagcctcacgtttattaagcacataataatagctactgagccagtat
ggatcacattatctcatgagtataagacattacatgatttatagtggtgt
tacaagttgatcaaatgcctggtaatattcaacaagtgctagaactcaaa
atatgtagtataaaattgcaaagataaaactaatgtgcattcatgactgt
ataaaaccttagtttcttttgattgaatttaatgatacaatatattgctt
ttattaaaagacataaaattgcctttaattcgaatatattattttccttg
acattcatagaaaataatcacattgatagagcttttctcaatgtttatat
caaatattactaatttcttatgatatataatttctacaaataccttccat
caatcaatttatggtgaagctgaataattgacaaggcccctggtagaata
tggcaccatatatgttcacattaattaatttatttgttttatatcccaat
ctctggcatacttcctatactttcatcacacagtctctccccctatcctc
ctaccctctcctcttctaaggggactgggtattcccctaccctagcatat
caactttctgtaggattagtcacatcccactccccaaggcagcccagttg
gggaatggattccatggaaatgcatcagctttaaggacagcacattccag
attttgggggatacacccaaactgagatacacatctgctacatatgtgct
acagggctcagtacaatccacgtatacttcttggttagtgactcaagctc
taagagcctgaaagggtccttgttagttgactgttcctactcctgtggcg
tcctacctccttcaaggccctcaatccttccaaagggtctccaaactcca
tcagctcctggatggagcactcagaggaaagacatgcttggctcctgtca
gcaagcacacgaaggtatcatggatttgt
tttctgcttatggatgtcccagtttctagtctatcctttcctctagacca
gttttttttttaattgacaggtgatgtatccagaaaagacacaagatttt
ctctatttataatcttaataaaaaccttcagaattcctataatgttactt
ttatgtatgtattcaggtcttcttagttgtgatatttgctccttatcatg
gtcttacacaaattcttaattgagcattctgaaacagttaataaagtaaa
ttattcatgccttagatattttttgtgaggtatttgagccacaataataa
caagctttaccatgaaagtagattgggaataagataggctatttcttgaa
ttaaacctgttgtatggttcttaaatatttggagatagtatcaaaaatat
ttggaaaaggtacagaaactggcataaagaaagctctagaatgctctaag
cagggaataatgtgtattaatatgcaaatcacagattataatggtgtaat
gtataaaactgacactctgatgatgataccgatgagagttccatatatat
atatgtgtgtgtgtgtatgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_18724346_18724884
seq2: B6Ng01-093E05.b_41_579 (reverse)

seq1  AAACAAATAAATTAATTAATGTGAACATATATGGTGCCATATTCTACCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATAAATTAATTAATGTGAACATATATGGTGCCATATTCTACCAG  50

seq1  GGGCCTTGTCAATTATTCAGCTTCACCATAAATTGATTGATGGAAGGTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTTGTCAATTATTCAGCTTCACCATAAATTGATTGATGGAAGGTAT  100

seq1  TTGTAGAAATTATATATCATAAGAAATTAGTAATATTTGATATAAACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAAATTATATATCATAAGAAATTAGTAATATTTGATATAAACATT  150

seq1  GAGAAAAGCTCTATCAATGTGATTATTTTCTATGAATGTCAAGGAAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGCTCTATCAATGTGATTATTTTCTATGAATGTCAAGGAAAATA  200

seq1  ATATATTCGAATTAAAGGCAATTTTATGTCTTTTAATAAAAGCAATATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTCGAATTAAAGGCAATTTTATGTCTTTTAATAAAAGCAATATAT  250

seq1  TGTATCATTAAATTCAATCAAAAGAAACTAAGGTTTTATACAGTCATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCATTAAATTCAATCAAAAGAAACTAAGGTTTTATACAGTCATGAA  300

seq1  TGCACATTAGTTTTATCTTTGCAATTTTATACTACATATTTTGAGTTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACATTAGTTTTATCTTTGCAATTTTATACTACATATTTTGAGTTCTA  350

seq1  GCACTTGTTGAATATTACCAGGCATTTGATCAACTTGTAACACCACTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTGTTGAATATTACCAGGCATTTGATCAACTTGTAACACCACTATA  400

seq1  AATCATGTAATGTCTTATACTCATGAGATAATGTGATCCATACTGGCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGTAATGTCTTATACTCATGAGATAATGTGATCCATACTGGCTCA  450

seq1  GTAGCTATTATTATGTGCTTAATAAACGTGAGGCTTTTTCATAGTCTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTATTATTATGTGCTTAATAAACGTGAGGCTTTTTCATAGTCTTTA  500

seq1  AATGTATATTATTAGAAAGTAACCAAATTCATTGAATTC  539
      |||||||||||||||||||||||||||||||||||||||
seq2  AATGTATATTATTAGAAAGTAACCAAATTCATTGAATTC  539

seq1: chr18_18565863_18566440
seq2: B6Ng01-093E05.g_67_644

seq1  GAATTCTTTCTGCTTATGGATGTCCCAGTTTCTAGTCTATCCTTTCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTGCTTATGGATGTCCCAGTTTCTAGTCTATCCTTTCCTCT  50

seq1  AGACCAGTTTTTTTTTTAATTGACAGGTGATGTATCCAGAAAAGACACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGTTTTTTTTTTAATTGACAGGTGATGTATCCAGAAAAGACACAA  100

seq1  GATTTTCTCTATTTATAATCTTAATAAAAACCTTCAGAATTCCTATAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTCTATTTATAATCTTAATAAAAACCTTCAGAATTCCTATAATG  150

seq1  TTACTTTTATGTATGTATTCAGGTCTTCTTAGTTGTGATATTTGCTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTTATGTATGTATTCAGGTCTTCTTAGTTGTGATATTTGCTCCTT  200

seq1  ATCATGGTCTTACACAAATTCTTAATTGAGCATTCTGAAACAGTTAATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGTCTTACACAAATTCTTAATTGAGCATTCTGAAACAGTTAATAA  250

seq1  AGTAAATTATTCATGCCTTAGATATTTTTTGTGAGGTATTTGAGCCACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATTATTCATGCCTTAGATATTTTTTGTGAGGTATTTGAGCCACAA  300

seq1  TAATAACAAGCTTTACCATGAAAGTAGATTGGGAATAAGATAGGCTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAACAAGCTTTACCATGAAAGTAGATTGGGAATAAGATAGGCTATTT  350

seq1  CTTGAATTAAACCTGTTGTATGGTTCTTAAATATTTGGAGATAGTATCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATTAAACCTGTTGTATGGTTCTTAAATATTTGGAGATAGTATCAA  400

seq1  AAATATTTGGAAAAGGTACAGAAACTGGCATAAAGAAAGCTCTAGAATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTGGAAAAGGTACAGAAACTGGCATAAAGAAAGCTCTAGAATGC  450

seq1  TCTAAGCAGGGAATAATGTGTATTAATATGCAAATCACAGATTATAATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCAGGGAATAATGTGTATTAATATGCAAATCACAGATTATAATGG  500

seq1  TGTAATGTATAAAACTGACACTCTGATGATGATACCGATGAGAGTTCCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATGTATAAAACTGACACTCTGATGATGATACCGATGAGAGTTCCAT  550

seq1  ATATATATATGTGTGTGTGTGTATGTAT  578
      ||||||||||||||||||||||||||||
seq2  ATATATATATGTGTGTGTGTGTATGTAT  578