BAC Information

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BAC

Clone NameB6Ng01-094H06
Chromosome18 (Build37)
Map Location 70,188,945 - 70,326,645
singlet/doubletdoublet
Overlap geneRab27b
Upstream geneLOC100043380, EG225681, Tcf4, Ccdc68
Downstream gene2310002L13Rik, 4930503L19Rik, Stard6, Poli, Mbd2, EG668032
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094H06.bB6Ng01-094H06.g
ACCDH905673DH905674
length1,1281,101
definitionDH905673|Mus musculus domesticus DNA, BAC clone: B6Ng01-094H06, 5' end.DH905674|Mus musculus domesticus DNA, BAC clone: B6Ng01-094H06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,325,505 - 70,326,645)(70,188,945 - 70,190,056)
sequence
gaattctctccccagctgtaggttcttaatgctcctcctgaaatgaatga
ccagatggctgagtgggcaaatttgatagacatctaatgcaaaggaaaac
tcacgttctccatgggacttttgtgtatggataagaatgagtgataaaat
gtcatagcattcagaggttagcgttgacagcctggctttatgacttatta
aggataaggaaaacagcatttacaaaatagagaaagtaatttgaatgtag
gctcaagtagaggcacacacaagcagatcgtttcttccttgtggctggtg
aataggcagaatgtcccacaagaaacccaggctcccaacattgtatggtt
gtttttgagagatggatttggaatctcccagaacttgtatacctgtgaaa
tccaaagtaagacaatttcaataatttgtggtggggggagggcagaaggg
ctgtctttttaaaagaaataaaataagaaaatagtctttttaagaaaaat
actttttaaaaatttatttttagtttttttattttttgaaaaataccttc
tatcacatctccatttctaattaaagaaaaccaaaagagatgaaatgtat
gaagtaaattttgaaagtgatgtgggggatgggcatggcggctcatgtca
gttgaggtcacaggccatttcagggtgacaatgaggctgactacctctct
cacagcccttttggtgttccaaacacaggtggttatggttctcacttgtc
cccataataaacaaaaacctatagacaaactagagtatcatttttgaaga
cttagcttatgcctctgcatgtgtctacgtactacagttacgagttctgg
ggcagaacacagttgattgttataatgctaagtgggactgaagcatccat
ccctgcaacgtcataaggaagcaccaacttacatgctaaattatgctgat
aactagtattataaactacctcttgctacagctgatatttttccattctt
cttcattttattgcggttcaaatctgacaagataaaaacaaacaaacatt
atttagcacctttgtcaattggaggaagcgattcttaaagtatcaaagta
aagttttaggcaaaaaatgataaattga
ccttttagaaagttctgcttttctcagtagggagactgactacggttcag
acatagcacaaaagtaaataatttagaagtttgttaatcatccttcaaat
ttgaatgatatacaatagtgactagtagtttttgcgggaagaaggcattt
tgataaattatagaatatttaatgactgaaactaaacttcttccttcagc
ctacctttagctagttatcatttgaaaagtatgaatcaatatttgctaga
cagaaacaaaatgccacatagcttatcaagcgagccttgtttccatagct
tatcaaaacccggaacatgttcgaggttgctacgttttctactattaatg
gttctataaatattttattcacatctactgtctgtactctatattaccgg
ggatctgtctatcttctgtggtgtacattgtatacatctcagggtctgtc
ttctaaaatgtatactctctatatccccagagtctgtcttctaaagtgta
tactctatatccccagggtctgtcttctaaagtgtatactctctatatcc
ccagggtctgtcttctaaagtgtatactctttatatccccagggtctgtc
ttctaaagtgtatactctctatatccccaggatctgtgttctgcagtgtc
agtagttgtaggaagtgagaggcaaacattatctcttcaatatggccatg
gaaaactaatactgaaaggtccttcaagtagattttataaacagtgtgcc
caaaggcattactttatcaagaaggtatccattggctttttgaatggctg
ttagaattctgacccataacaaatcatgaatggacccttaagcagtgtct
agctgctcacagccctatcttgctgctggtgaaccaaaggagagagcaca
ataaggttgaagcaaccttgactactccacagtcaagttgtgtgctttct
ctatatacatcaatgcttcagagcatcagcattatgatcccattctggcc
ttttgagaagtaagtctggaagatagtgtcagcacacccttaggggtgtg
tgcccagtcagcagtgctctatgttgtcaccacagccatgatcattcatg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_70325505_70326645
seq2: B6Ng01-094H06.b_45_1172 (reverse)

seq1  TCAATTTATCATTTCTTTCCCTTAAAACTCTTACTTTTGATACTCTTAAG  50
      |||||||||||||| || ||  ||||||| |||| ||||||||| |||||
seq2  TCAATTTATCATTTTTTGCC--TAAAACT-TTAC-TTTGATACT-TTAAG  45

seq1  AATTCTGCCTCCTCCAAATTGACAAAGGTGCTAAATAATGTTTTGTTTTG  100
      |||   || |||||| |||||||||||||||||||||||| |||||||  
seq2  AAT--CGCTTCCTCC-AATTGACAAAGGTGCTAAATAATG-TTTGTTT--  89

seq1  TTTTTTATCTTGTCTGATTTTGAAACGCAATAAAAATGTAGAAGAATGGA  150
       ||||||||||||| || |||||| |||||| |||||| |||||||||||
seq2  GTTTTTATCTTGTCAGA-TTTGAACCGCAAT-AAAATGAAGAAGAATGGA  137

seq1  AAAATATCAGCTGTAGCAAGAGGTAGTTTAT-ATACTAGTTATCAGCATA  199
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAAATATCAGCTGTAGCAAGAGGTAGTTTATAATACTAGTTATCAGCATA  187

seq1  ATTTTAGCATGTAAGTTGGTGCTTCCTTATGACGTTGCAGGGATGGATGC  249
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TTTAGCATGTAAGTTGGTGCTTCCTTATGACGTTGCAGGGATGGATGC  236

seq1  TTCAGTCCCACTTAGCATTATAACAATCAACTGTGTTCTGCCCCAGAACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTCCCACTTAGCATTATAACAATCAACTGTGTTCTGCCCCAGAACT  286

seq1  CGTAACTGTAGTACGTAGACACATGCAGAGGCATAAGCTAAGTCTTCAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAACTGTAGTACGTAGACACATGCAGAGGCATAAGCTAAGTCTTCAAA  336

seq1  AATGATACTCTAGTTTGTCTATAGGTTTTTGTTTATTATGGGGACAAGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATACTCTAGTTTGTCTATAGGTTTTTGTTTATTATGGGGACAAGTG  386

seq1  AGAACCATAACCACCTGTGTTTGGAACACCAAAAGGGCTGTGAGAGAGGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCATAACCACCTGTGTTTGGAACACCAAAAGGGCTGTGAGAGAGGT  436

seq1  AGTCAGCCTCATTGTCACCCTGAAATGGCCTGTGACCTCAACTGACATGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGCCTCATTGTCACCCTGAAATGGCCTGTGACCTCAACTGACATGA  486

seq1  GCCGCCATGCCCATCCCCCACATCACTTTCAAAATTTACTTCATACATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCCATGCCCATCCCCCACATCACTTTCAAAATTTACTTCATACATTT  536

seq1  CATCTCTTTTGGTTTTCTTTAATTAGAAATGGAGATGTGATAGAAGGTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTTTTGGTTTTCTTTAATTAGAAATGGAGATGTGATAGAAGGTAT  586

seq1  TTTTCAAAAAATAAAAAAACTAAAAATAAATTTTTAAAAAGTATTTTTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAAAAATAAAAAAACTAAAAATAAATTTTTAAAAAGTATTTTTCT  636

seq1  TAAAAAGACTATTTTCTTATTTTATTTCTTTTAAAAAGACAGCCCTTCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGACTATTTTCTTATTTTATTTCTTTTAAAAAGACAGCCCTTCTG  686

seq1  CCCTCCCCCCACCACAAATTATTGAAATTGTCTTACTTTGGATTTCACAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCCACCACAAATTATTGAAATTGTCTTACTTTGGATTTCACAG  736

seq1  GTATACAAGTTCTGGGAGATTCCAAATCCATCTCTCAAAAACAACCATAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACAAGTTCTGGGAGATTCCAAATCCATCTCTCAAAAACAACCATAC  786

seq1  AATGTTGGGAGCCTGGGTTTCTTGTGGGACATTCTGCCTATTCACCAGCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGGGAGCCTGGGTTTCTTGTGGGACATTCTGCCTATTCACCAGCC  836

seq1  ACAAGGAAGAAACGATCTGCTTGTGTGTGCCTCTACTTGAGCCTACATTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAAGAAACGATCTGCTTGTGTGTGCCTCTACTTGAGCCTACATTC  886

seq1  AAATTACTTTCTCTATTTTGTAAATGCTGTTTTCCTTATCCTTAATAAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACTTTCTCTATTTTGTAAATGCTGTTTTCCTTATCCTTAATAAGT  936

seq1  CATAAAGCCAGGCTGTCAACGCTAACCTCTGAATGCTATGACATTTTATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGCCAGGCTGTCAACGCTAACCTCTGAATGCTATGACATTTTATC  986

seq1  ACTCATTCTTATCCATACACAAAAGTCCCATGGAGAACGTGAGTTTTCCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTCTTATCCATACACAAAAGTCCCATGGAGAACGTGAGTTTTCCT  1036

seq1  TTGCATTAGATGTCTATCAAATTTGCCCACTCAGCCATCTGGTCATTCAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATTAGATGTCTATCAAATTTGCCCACTCAGCCATCTGGTCATTCAT  1086

seq1  TTCAGGAGGAGCATTAAGAACCTACAGCTGGGGAGAGAATTC  1141
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGAGGAGCATTAAGAACCTACAGCTGGGGAGAGAATTC  1128

seq1: chr18_70188945_70190056
seq2: B6Ng01-094H06.g_77_1177

seq1  CCTTTTAGAAAGTTCTGCTTTTCTCAGTAGGGAGACTGACTACGGTTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAGAAAGTTCTGCTTTTCTCAGTAGGGAGACTGACTACGGTTCAG  50

seq1  ACATAGCACAAAAGTAAATAATTTAGAAGTTTGTTAATCATCCTTCAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGCACAAAAGTAAATAATTTAGAAGTTTGTTAATCATCCTTCAAAT  100

seq1  TTGAATGATATACAATAGTGACTAGTAGTTTTTGCGGGAAGAAGGCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATGATATACAATAGTGACTAGTAGTTTTTGCGGGAAGAAGGCATTT  150

seq1  TGATAAATTATAGAATATTTAATGACTGAAACTAAACTTCTTCCTTCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAATTATAGAATATTTAATGACTGAAACTAAACTTCTTCCTTCAGC  200

seq1  CTACCTTTAGCTAGTTATCATTTGAAAAGTATGAATCAATATTTGCTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTTAGCTAGTTATCATTTGAAAAGTATGAATCAATATTTGCTAGA  250

seq1  CAGAAACAAAATGCCACATAGCTTATCAAGCGAGCCTTGTTTCCATAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACAAAATGCCACATAGCTTATCAAGCGAGCCTTGTTTCCATAGCT  300

seq1  TATCAAAACCCGGAACATGTTCGAGGTTGCTACGTTTTCTACTATTAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAACCCGGAACATGTTCGAGGTTGCTACGTTTTCTACTATTAATG  350

seq1  GTTCTATAAATATTTTATTCACATCTACTGTCTGTACTCTATATTACCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATAAATATTTTATTCACATCTACTGTCTGTACTCTATATTACCGG  400

seq1  GGATCTGTCTATCTTCTGTGGTGTACATTGTATACATCTCAGGGTCTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTGTCTATCTTCTGTGGTGTACATTGTATACATCTCAGGGTCTGTC  450

seq1  TTCTAAAATGTATACTCTCTATATCCCCAGAGTCTGTCTTCTAAAGTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAATGTATACTCTCTATATCCCCAGAGTCTGTCTTCTAAAGTGTA  500

seq1  TACTCTATATCCCCAGGGTCTGTCTTCTAAAGTGTATACTCTCTATATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTATATCCCCAGGGTCTGTCTTCTAAAGTGTATACTCTCTATATCC  550

seq1  CCAGGGTCTGTCTTCTAAAGTGTATACTCTTTATATCCCCAGGGTCTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTCTGTCTTCTAAAGTGTATACTCTTTATATCCCCAGGGTCTGTC  600

seq1  TTCTAAAGTGTATACTCTCTATATCCCCAGGATCTGTGTTCTGCAGTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAGTGTATACTCTCTATATCCCCAGGATCTGTGTTCTGCAGTGTC  650

seq1  AGTAGTTGTAGGAAGTGAGAGGCAAACATTATCTCTTCAATATGGCCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTGTAGGAAGTGAGAGGCAAACATTATCTCTTCAATATGGCCATG  700

seq1  GAAAACTAATACTGAAAGGTCCTTCAAGTAGATTTTATAAACAGTGTGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTAATACTGAAAGGTCCTTCAAGTAGATTTTATAAACAGTGTGCC  750

seq1  CAAAGGCATTACTTTATCAAGAAGGTATCCATTGGCTTTTTGAATGGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCATTACTTTATCAAGAAGGTATCCATTGGCTTTTTGAATGGCTG  800

seq1  TTAGAATTCTGACCCATAACAAATCATGAATGGACCCTTAAGCAGGTGTC  850
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTAGAATTCTGACCCATAACAAATCATGAATGGACCCTTAAGCA-GTGTC  849

seq1  TAGCTGCTCACAGCCCTATCTTGCTGCTGGTGAACCAAAGGAGAGAGCAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCTCACAGCCCTATCTTGCTGCTGGTGAACCAAAGGAGAGAGCAC  899

seq1  AATAAGGTTGAAGCAACCTTGACTACTCCACAGTCAAGTTGTGTGCTTTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGTTGAAGCAACCTTGACTACTCCACAGTCAAGTTGTGTGCTTTC  949

seq1  TCCTATTATACATCAATGCTTCAGAGCAATCAGCATTATGATCCCCAATT  1000
      | ||| ||||||||||||||||||||| |||||||||||||||||  |||
seq2  T-CTA-TATACATCAATGCTTCAGAGC-ATCAGCATTATGATCCC--ATT  994

seq1  CTGGCCTTTTGAGAAGTAAGTCTGGAAGAAAGTTGTCAAGCCACACCCTT  1050
      ||||||||||||||||||||||||||||| || |||||   |||||||||
seq2  CTGGCCTTTTGAGAAGTAAGTCTGGAAGATAG-TGTCA--GCACACCCTT  1041

seq1  AGGGGTTGTGTGCCCAGTCAGCAGTGGCTCTATG-TGTCACCACAGCCAT  1099
      ||||| ||||||||||||||||||| |||||||| |||||||||||||||
seq2  AGGGG-TGTGTGCCCAGTCAGCAGT-GCTCTATGTTGTCACCACAGCCAT  1089

seq1  GATCATTCCATGT  1112
      ||||||| |||||
seq2  GATCATT-CATGT  1101