BAC Information

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BAC

Clone NameB6Ng01-095J14
Chromosome18 (Build37)
Map Location 14,238,096 - 14,407,684
singlet/doubletdoublet
Overlap geneLOC100040094, LOC100040103
Upstream geneEG383354, LOC665379, LOC100040358, Zfp521
Downstream geneLOC100040391, LOC382096, LOC100040129, EG623867, Ss18, LOC100040446, Psma8, Taf4b, LOC669965, Kctd1, EG622268, LOC100040151
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095J14.bB6Ng01-095J14.g
ACCDH906497DH906498
length1,0251,167
definitionDH906497|Mus musculus domesticus DNA, BAC clone: B6Ng01-095J14, 5' end.DH906498|Mus musculus domesticus DNA, BAC clone: B6Ng01-095J14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,238,096 - 14,239,123)(14,406,456 - 14,407,684)
sequence
gaattctttaggtcagatgttctatcgaagtggccacaaagctatcatca
gctcattttccttattggagatatttctgatattcaccactattcctggt
ttttctgtctctgtgagtatctgggaaatctgcccatgtcaactctctga
atccactgacttgtgctgaccacgtaaatggaaaggatgggtagcacaaa
gggatgctgacctctgatagctggaatgtgtctcactttcctgtcccatc
ctttctaatacagcagcaatgaaggagacttcaaggtgaaagagcataaa
gcctgagtcagtaagtgttgcttcctgtgcatcccttgcagctagagcaa
gagcaagagctaggaaaacatgttttattagtgttaagccgctgaagcat
tcattagggttagttgttaccacggcataacctagcatagcctagcatag
tgtaactaaattcttcattctatggatggcaaatttaactattaacatga
gtagtatgaaaatttaaagtattcagactgcaatattactgtgaaatggg
atagttgaagacttcttcataaaggatgcataatttggtttttaccttac
aggacattgggggaagtggttgtgatatggttagagtattcacagtctca
aagtgaaagacattcaaataaagaagaaaaatgagaataaaatagctact
tgattataacagcaataaaatagcttattatatatgaatttgggtaccta
gcttctgatgcacattatttcatcatggctactatggagccactaaccag
ctcaacagtcctagaggaatggtggctacctctatttcttttaacagcag
acagatgcatcattgcttcactaagatcgctgggcctacttgactgttgg
actccatccatcttgctcctggactgaagataaaaagtgtgcatcttgta
tcacgtgctttgtctttgtttgctcctcttcctctggatgctgctgtcca
taatcaactcagctggctcctgtcc
gaattctgaccaaatgcgctctcctttcccagtgtctctatgcctatact
tatcagctatttgttctgaattatttagaaattgtctcgacatccatctc
ccatgttgacagagatatatccataaagagttattatataagcaatatta
ttattgtaattattgttatcattagctgcttcatttcttagcattttcct
tgtggttcatcgagggtcttctgagggctattaaagagcttgaaagaata
agaatcgtactagtagatatttatttccattgtattatttacaagtctat
cgtagggaatcctgctaactcccagttgtcaaatccacaaaaaccttaaa
ttctcacccctctcatctgtaagctttaacagcagcaagatggagtgaag
gctagtattactcaaacttcattactcatacaaaacattcctgagcgctc
tcgtgctgtggggtatgtacataaataattaaagcagagctatgctcgtc
agaagaacagaggcaaatacatcctcttctgtttgcaggcactgtatcgg
caatgacttcctcattaatgcagcaattcactaagggctgccgtagttaa
tgggaattagcaaagcgctagtgtgcccttattcatctgtggagaggctg
tacaatattcgaagtgagaggcctgttgaatgtcatttactggaagtgcc
ctcttcttatggtccctttcgagcagcaccaggggacttacggtttcgga
agtgtcactgaaagggccgcacagtcgcagagttcattagagtttgagtc
ctgtttcccatggattctctgctttccttcttccatcaagaaagagaact
ttggaaatgacttcaagttgtgccctatagagcaagactctgtgtatctc
tttgtatatgctgtcagcaaaggcaaactatagctagcagtactatcaca
ctagtaagtagcagcacttttataacagagaaaatttgtcatgtttatga
aatgtattttatagcattgaatatcgtagtaaaaaataaatcaagcttat
tctgtcagtatgttataaatttcttggtatcagtaaaaatagaatcaagg
tccctcctgaggaaattcatgtcaaggtccgactgctgaccggtgatctt
atgacttctaccttaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_14238096_14239123
seq2: B6Ng01-095J14.b_45_1069

seq1  GAATTCTTTAGGTCAGATGTTCTATCGAAGTGGCCACAAAGCTATCATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGGTCAGATGTTCTATCGAAGTGGCCACAAAGCTATCATCA  50

seq1  GCTCATTTTCCTTATTGGAGATATTTCTGATATTCACCACTATTCCTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATTTTCCTTATTGGAGATATTTCTGATATTCACCACTATTCCTGGT  100

seq1  TTTTCTGTCTCTGTGAGTATCTGGGAAATCTGCCCATGTCAACTCTCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTCTCTGTGAGTATCTGGGAAATCTGCCCATGTCAACTCTCTGA  150

seq1  ATCCACTGACTTGTGCTGACCACGTAAATGGAAAGGATGGGTAGCACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTGACTTGTGCTGACCACGTAAATGGAAAGGATGGGTAGCACAAA  200

seq1  GGGATGCTGACCTCTGATAGCTGGAATGTGTCTCACTTTCCTGTCCCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCTGACCTCTGATAGCTGGAATGTGTCTCACTTTCCTGTCCCATC  250

seq1  CTTTCTAATACAGCAGCAATGAAGGAGACTTCAAGGTGAAAGAGCATAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTAATACAGCAGCAATGAAGGAGACTTCAAGGTGAAAGAGCATAAA  300

seq1  GCCTGAGTCAGTAAGTGTTGCTTCCTGTGCATCCCTTGCAGCTAGAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAGTCAGTAAGTGTTGCTTCCTGTGCATCCCTTGCAGCTAGAGCAA  350

seq1  GAGCAAGAGCTAGGAAAACATGTTTTATTAGTGTTAAGCCGCTGAAGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGAGCTAGGAAAACATGTTTTATTAGTGTTAAGCCGCTGAAGCAT  400

seq1  TCATTAGGGTTAGTTGTTACCACGGCATAACCTAGCATAGCCTAGCATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGGGTTAGTTGTTACCACGGCATAACCTAGCATAGCCTAGCATAG  450

seq1  TGTAACTAAATTCTTCATTCTATGGATGGCAAATTTAACTATTAACATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTAAATTCTTCATTCTATGGATGGCAAATTTAACTATTAACATGA  500

seq1  GTAGTATGAAAATTTAAAGTATTCAGACTGCAATATTACTGTGAAATGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTATGAAAATTTAAAGTATTCAGACTGCAATATTACTGTGAAATGGG  550

seq1  ATAGTTGAAGACTTCTTCATAAAGGATGCATAATTTGGTTTTTACCTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTGAAGACTTCTTCATAAAGGATGCATAATTTGGTTTTTACCTTAC  600

seq1  AGGACATTGGGGGAAGTGGTTGTGATATGGTTAGAGTATTCACAGTCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATTGGGGGAAGTGGTTGTGATATGGTTAGAGTATTCACAGTCTCA  650

seq1  AAGTGAAAGACATTCAAAT-AAGAAGAAAAATGAGAATAAAATAGCTACT  699
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AAGTGAAAGACATTCAAATAAAGAAGAAAAATGAGAATAAAATAGCTACT  700

seq1  TGATTATAACAGCAATAAAATAGCTTATTATATATGAATTTGGGTACCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATAACAGCAATAAAATAGCTTATTATATATGAATTTGGGTACCTA  750

seq1  GCTTCTGATGCACATTATTTCATCATGGCTACTATGGAGCCACTAACCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGATGCACATTATTTCATCATGGCTACTATGGAGCCACTAACCAG  800

seq1  CTCAACAGTCCTAGAGGAATGGTGGCTACCTCTATTTCTTTTTAACAGCA  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTCAACAGTCCTAGAGGAATGGTGGCTACCTCTATTTC-TTTTAACAGCA  849

seq1  GACAGATGCATCAATGCTTCACTAAGAATCGCTGGGCCTACTTGACTGTT  899
      ||||||||||||| |||||||||||| |||||||||||||||||||||||
seq2  GACAGATGCATCATTGCTTCACTAAG-ATCGCTGGGCCTACTTGACTGTT  898

seq1  GGACTCCATCCATCTTGCTCCTGGACTGAAGATAAAAAGTGTTGCATCTT  949
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGACTCCATCCATCTTGCTCCTGGACTGAAGATAAAAAGTG-TGCATCTT  947

seq1  GTATCACGTGCTTTGTCTTTGTTTGCTCCTCTT-CTCTGGGATGCTGCTG  998
      ||||||||||||||||||||||||||||||||| |||| |||||||||||
seq2  GTATCACGTGCTTTGTCTTTGTTTGCTCCTCTTCCTCT-GGATGCTGCTG  996

seq1  TCACATCATCTAGCTCAGCTGGCT-CTGTCC  1028
      || ||| ||| | ||||||||||| ||||||
seq2  TC-CATAATC-AACTCAGCTGGCTCCTGTCC  1025

seq1: chr18_14406456_14407684
seq2: B6Ng01-095J14.g_66_1232 (reverse)

seq1  GTTAAG--AGAAGTCAAATAAAAGAAAATTCATACCGGTCAAGCCAATGC  48
      ||||||  |||||||    | ||||    ||  ||||||| |||    | 
seq2  GTTAAGGTAGAAGTC----ATAAGA----TC--ACCGGTC-AGC---AGT  36

seq1  TTGACCTTTTAGACATGAATTTCCTCATGGAAGGAACTTTGATCTATCTT  98
        ||||||   |||||||||||||||| ||| ||| |||   ||||| ||
seq2  CGGACCTT---GACATGAATTTCCTCA-GGAGGGACCTTGATTCTATTTT  82

seq1  TTACACTGATTTACACAAGAAATATTTAATTAACATTTACTGACAGAATA  148
      |   |||||  ||| ||||||  |||||  |||||  |||||||||||||
seq2  T---ACTGA--TAC-CAAGAA--ATTTA--TAACA--TACTGACAGAATA  120

seq1  AGCCTGAAATTTAATTTTTTTACTACCGATTATTTCAAATTGGCCTAATT  198
      ||| ||  |||||  |||||||||| ||||   |||||  ||  |||   
seq2  AGCTTG--ATTTA--TTTTTTACTA-CGAT--ATTCAA--TG--CTA---  156

seq1  TAAAAATAACATTTTCATAAACATTGACATATTTTCTTCTGTTATAAAAG  248
      |||||   ||| ||||||||||| ||||| |||||| |||||||||||||
seq2  TAAAA--TACA-TTTCATAAACA-TGACAAATTTTC-TCTGTTATAAAAG  201

seq1  TGCTTGCCTACTTTACCTAGTGTGATTAAGTACTTGCTAGCTATAGTTTG  298
      ||||   ||||||   ||||||||||  ||||| ||||||||||||||||
seq2  TGCT--GCTACTT--ACTAGTGTGAT--AGTAC-TGCTAGCTATAGTTTG  244

seq1  CCTTTTTGCTGACAGCAATTATACAAAGAGATACACAGAGTCTTGCTCTA  348
      ||  |||||||||||||  |||||||||||||||||||||||||||||||
seq2  CC--TTTGCTGACAGCA--TATACAAAGAGATACACAGAGTCTTGCTCTA  290

seq1  TAGGGCACAAACTTGAAGTCATTTTCCAAAGTTCTTCTTTCTTGATGGAA  398
      |||||||| |||||||||||| |||||||||||| |||||||||||||||
seq2  TAGGGCAC-AACTTGAAGTCA-TTTCCAAAGTTC-TCTTTCTTGATGGAA  337

seq1  GAAAGGAAAGCAGAGAATCCATGGGAAACAGGACTCAAACTCTAATGAAC  448
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-AAGGAAAGCAGAGAATCCATGGGAAACAGGACTCAAACTCTAATGAAC  386

seq1  TCTGCGACTGTGCGGCCCCTTCAGTGACACTTCCGAAACCGTAAGTCCCC  498
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCTGCGACTGTGCGGCCCTTTCAGTGACACTTCCGAAACCGTAAGTCCCC  436

seq1  TGGTGCTGCTCGAAAGGGACCATAAGAAGAGGGCACTTCCAGTAAATGAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCTGCTCGAAAGGGACCATAAGAAGAGGGCACTTCCAGTAAATGAC  486

seq1  ATTCAACAGGCCTCTCACTTCGAATATTGTACAGCCTCTCCACAGATGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACAGGCCTCTCACTTCGAATATTGTACAGCCTCTCCACAGATGAA  536

seq1  TAAGGGCACACTAGCGCTTTGCTAATTCCCATTAACTACGGCAGCCCTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGCACACTAGCGCTTTGCTAATTCCCATTAACTACGGCAGCCCTTA  586

seq1  GTGAATTGCTGCATTAATGAGGAAGTCATTGCCGATACAGTGCCTGCAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATTGCTGCATTAATGAGGAAGTCATTGCCGATACAGTGCCTGCAAA  636

seq1  CAGAAGAGGATGTATTTGCCTCTGTTCTTCTGACGAGCATAGCTCTGCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGGATGTATTTGCCTCTGTTCTTCTGACGAGCATAGCTCTGCTT  686

seq1  TAATTATTTATGTACATACCCCACAGCACGAGAGCGCTCAGGAATGTTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTTATGTACATACCCCACAGCACGAGAGCGCTCAGGAATGTTTT  736

seq1  GTATGAGTAATGAAGTTTGAGTAATACTAGCCTTCACTCCATCTTGCTGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGTAATGAAGTTTGAGTAATACTAGCCTTCACTCCATCTTGCTGC  786

seq1  TGTTAAAGCTTACAGATGAGAGGGGTGAGAATTTAAGGTTTTTGTGGATT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAAGCTTACAGATGAGAGGGGTGAGAATTTAAGGTTTTTGTGGATT  836

seq1  TGACAACTGGGAGTTAGCAGGATTCCCTACGATAGACTTGTAAATAATAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAACTGGGAGTTAGCAGGATTCCCTACGATAGACTTGTAAATAATAC  886

seq1  AATGGAAATAAATATCTACTAGTACGATTCTTATTCTTTCAAGCTCTTTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAAATAAATATCTACTAGTACGATTCTTATTCTTTCAAGCTCTTTA  936

seq1  ATAGCCCTCAGAAGACCCTCGATGAACCACAAGGAAAATGCTAAGAAATG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCCTCAGAAGACCCTCGATGAACCACAAGGAAAATGCTAAGAAATG  986

seq1  AAGCAGCTAATGATAACAATAATTACAATAATAATATTGCTTATATAATA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCTAATGATAACAATAATTACAATAATAATATTGCTTATATAATA  1036

seq1  ACTCTTTATGGATATATCTCTGTCAACATGGGAGATGGATGTCGAGACAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTATGGATATATCTCTGTCAACATGGGAGATGGATGTCGAGACAA  1086

seq1  TTTCTAAATAATTCAGAACAAATAGCTGATAAGTATAGGCATAGAGACAC  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAATAATTCAGAACAAATAGCTGATAAGTATAGGCATAGAGACAC  1136

seq1  TGGGAAAGGAGAGCGCATTTGGTCAGAATTC  1229
      |||||||||||||||||||||||||||||||
seq2  TGGGAAAGGAGAGCGCATTTGGTCAGAATTC  1167