BAC Information

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BAC

Clone NameB6Ng01-096C23
Chromosome18 (Build37)
Map Location 58,476,188 - 58,613,320
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC672445, Prrc1, 1700011I03Rik, 4930511M06Rik, 2210409D07Rik, Slc12a2, 9330166H04Rik, Fbn2
Downstream geneSlc27a6, Isoc1, Adamts19, A730017C20Rik, 4833446K15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096C23.bB6Ng01-096C23.g
ACCDH906918DH906919
length1461,089
definitionDH906918|Mus musculus domesticus DNA, BAC clone: B6Ng01-096C23, 5' end.DH906919|Mus musculus domesticus DNA, BAC clone: B6Ng01-096C23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,476,188 - 58,476,332)(58,612,223 - 58,613,320)
sequence
atcatctgagcagttatatttgaattgaaaaaatctctccctgtccacca
aggtccaccttcatcttgagtgttatataaaaataacattgtgaataaat
ccttaggctataattctcttgatctgaggggggatgggatagggag
gaattctttcgattactgattgatgtaggataccccagagagtggacggt
actgtccctagacaggtggccctggactgtgtaagagaggcagtggaatc
agagcctgggggcaaaacagtaagaagccatggtctctgcttcagttcct
gcctctggctttctgtttttgcttctaggtgatggactgcaaagtgtaag
atgaagtaaaccatttttccccaagttgcttttggtcatgctatttatta
cagccagagcagggcatgtgcccagggctatgaatcctgacaccgtgagt
cagtttccttctcgatgttttgtgtataacctgctttccatgctttagat
actgactagatgctagataactcttcttgcttactcagaagaaaaacagg
taattatttatggttgcattttacttgaaaagattaaaaaggagggaatc
tttaggaggctatcctagtgacttttaataatgactgagataattttaga
aataattgtctctctgtcctccactagaggctgaatccacaattctgggt
atggctcgggagttggtatttttaaaatccctccagatgtttcactgttc
attggaattcatagccagtgtctcagaatggggaagcactgagctagcat
agctgctgtagctacagctgcatggctgacatttttaactttccacccca
ttcacactctcattgagggctgcactcaacctagtattcaagcaggcaag
caagcaagcaagcaaacaaacaaacaatgacaaaagcccatgcccttgag
aataagtaatcacagattcactgtctttatctcaccaacaagaaaagctt
gcagtttacacagcaatactgcataagaggaaggaaggaaagggttcctg
ataggccttcaaaagctttcaccatcctgatagcccaccaggctttcctt
atctagtatagaaaggagcctcacttaaagcaaaattgtgtctgtgtgga
ctaactatgctttctgttttggatgtactaagatttctgtgtcgttctgg
ttgattctgtcctctgtctctctgacctctcttccctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_58476188_58476332
seq2: B6Ng01-096C23.b_41_186

seq1  ATCATCTGAGCAGTTATATTTGAATTG-ATTTATCTCTCCCTGTCCACCA  49
      ||||||||||||||||||||||||||| |   ||||||||||||||||||
seq2  ATCATCTGAGCAGTTATATTTGAATTGAAAAAATCTCTCCCTGTCCACCA  50

seq1  AGGTCCACCTTCATCTTGAGTGTTATATAAAAATAACATTGTGAATAAAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCACCTTCATCTTGAGTGTTATATAAAAATAACATTGTGAATAAAT  100

seq1  CCTTAGGCTATAATTCTCTTGATCTGAGGGGGGATGGGATAGGGAG  145
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGGCTATAATTCTCTTGATCTGAGGGGGGATGGGATAGGGAG  146

seq1: chr18_58612223_58613320
seq2: B6Ng01-096C23.g_65_1153 (reverse)

seq1  ACAGGGAGAGAGA-GACAGAGAGACAGAGAGACAGAAACCAACAGAACGA  49
      ||||||| ||||| | ||||||||||||| ||||||| | | ||||||||
seq2  ACAGGGA-AGAGAGGTCAGAGAGACAGAG-GACAGAATCAACCAGAACGA  48

seq1  CACAGGAAATCTTAAGTAACATTCCAGACAGAAAGCATAGTTAGTTCCAA  99
      |||| |||||||| ||| |||| | | ||||||||||||||||||  | |
seq2  CACA-GAAATCTT-AGT-ACATCCAAAACAGAAAGCATAGTTAGT--CCA  93

seq1  CACAGACACAATTTTGCTTTTAAGTGAGGCTCCTTTCTATACTAGATAAG  149
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CACAGACACAATTTTGC-TTTAAGTGAGGCTCCTTTCTATACTAGATAAG  142

seq1  GAAAGCCTGGTGGGCTTATCAGGATGGTGAAAGCTTTTGAAGGCCTATCA  199
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GAAAGCCTGGTGGGC-TATCAGGATGGTGAAAGCTTTTGAAGGCCTATCA  191

seq1  GGAACCCTTTCCTTCCTTCCTCTTATGCAGTATTTGCTGTGTAAACTGCA  249
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGAACCCTTTCCTTCCTTCCTCTTATGCAGTA-TTGCTGTGTAAACTGCA  240

seq1  AGCTTTTCTTGTTGGTGAGATAAAGACAGTGAATCTGTGATTACTTATTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTCTTGTTGGTGAGATAAAGACAGTGAATCTGTGATTACTTATTC  290

seq1  TCAAGGGCATGGGCTTTTGTCATTGTTTGTTTGTTTGCTTGCTTGCTTGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGCATGGGCTTTTGTCATTGTTTGTTTGTTTGCTTGCTTGCTTGC  340

seq1  TTGCCTGCTTGAATACTAGGTTGAGTGCAGCCCTCAATGAGAGTGTGAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGCTTGAATACTAGGTTGAGTGCAGCCCTCAATGAGAGTGTGAAT  390

seq1  GGGGTGGAAAGTTAAAAATGTCAGCCATGCAGCTGTAGCTACAGCAGCTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGAAAGTTAAAAATGTCAGCCATGCAGCTGTAGCTACAGCAGCTA  440

seq1  TGCTAGCTCAGTGCTTCCCCATTCTGAGACACTGGCTATGAATTCCAATG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCTCAGTGCTTCCCCATTCTGAGACACTGGCTATGAATTCCAATG  490

seq1  AACAGTGAAACATCTGGAGGGATTTTAAAAATACCAACTCCCGAGCCATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGAAACATCTGGAGGGATTTTAAAAATACCAACTCCCGAGCCATA  540

seq1  CCCAGAATTGTGGATTCAGCCTCTAGTGGAGGACAGAGAGACAATTATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAATTGTGGATTCAGCCTCTAGTGGAGGACAGAGAGACAATTATTT  590

seq1  CTAAAATTATCTCAGTCATTATTAAAAGTCACTAGGATAGCCTCCTAAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATTATCTCAGTCATTATTAAAAGTCACTAGGATAGCCTCCTAAAG  640

seq1  ATTCCCTCCTTTTTAATCTTTTCAAGTAAAATGCAACCATAAATAATTAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTCCTTTTTAATCTTTTCAAGTAAAATGCAACCATAAATAATTAC  690

seq1  CTGTTTTTCTTCTGAGTAAGCAAGAAGAGTTATCTAGCATCTAGTCAGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTCTTCTGAGTAAGCAAGAAGAGTTATCTAGCATCTAGTCAGTA  740

seq1  TCTAAAGCATGGAAAGCAGGTTATACACAAAACATCGAGAAGGAAACTGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAGCATGGAAAGCAGGTTATACACAAAACATCGAGAAGGAAACTGA  790

seq1  CTCACGGTGTCAGGATTCATAGCCCTGGGCACATGCCCTGCTCTGGCTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACGGTGTCAGGATTCATAGCCCTGGGCACATGCCCTGCTCTGGCTGT  840

seq1  AATAAATAGCATGACCAAAAGCAACTTGGGGAAAAATGGTTTACTTCATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAGCATGACCAAAAGCAACTTGGGGAAAAATGGTTTACTTCATC  890

seq1  TTACACTTTGCAGTCCATCACCTAGAAGCAAAAACAGAAAGCCAGAGGCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTTTGCAGTCCATCACCTAGAAGCAAAAACAGAAAGCCAGAGGCA  940

seq1  GGAACTGAAGCAGAGACCATGGCTTCTTACTGTTTTGCCCCCAGGCTCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGAAGCAGAGACCATGGCTTCTTACTGTTTTGCCCCCAGGCTCTG  990

seq1  ATTCCACTGCCTCTCTTACACAGTCCAGGGCCACCTGTCTAGGGACAGTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACTGCCTCTCTTACACAGTCCAGGGCCACCTGTCTAGGGACAGTA  1040

seq1  CCGTCCACTCTCTGGGGTATCCTACATCAATCAGTAATCGAAAGAATTC  1098
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCCACTCTCTGGGGTATCCTACATCAATCAGTAATCGAAAGAATTC  1089