BAC Information

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BAC

Clone NameB6Ng01-096F18
Chromosome18 (Build37)
Map Location 58,723,368 - 58,724,559
singlet/doubletsinglet
Overlap geneSlc27a6
Upstream gene1700011I03Rik, 2210409D07Rik, Slc12a2, 9330166H04Rik, Fbn2
Downstream geneIsoc1, Adamts19, A730017C20Rik, 4833446K15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-096F18.bB6Ng01-096F18.g
ACCDH907033DH907034
length1,1951,174
definitionDH907033|Mus musculus domesticus DNA, BAC clone: B6Ng01-096F18, 5' end.DH907034|Mus musculus domesticus DNA, BAC clone: B6Ng01-096F18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgcctcagcggaatcagctgaattttaaggatgtgaaatcgtgt
gtttttgtttttgtttttttaatttgctcacttcctttattctagtaaac
atgactactctttgtaaaccctcactattccctagactccagcctcaacg
aagattcggttcccaatcataatggaactcctcactaacattccaattca
ttaagaaattatagaaatttagctgttggcttataattccagatggctga
cttgaaattatgataattacaataagtagttgaaagactcaataagttca
aatgccagaaagaatagtttaaacagaacgtagagctattgatttgaaag
gctcctttgtgctgtctttctgtatctgtcttgtctttccttccagccat
ccttgtgaggttttgctcctggccaacagcagtctgcacacagctggatg
tggcgtaacctcatgcaccaatcagaactgagcattcgccttgggttctt
acatcttgctgtatttgaacttgtgatagaaataaagattaataagacac
ttaaagtctcaaccccaagcttcctggtgacatggcaccctgttagttat
gtgtttgttttgagtttcttacaaattctatttatgaattatttagtgcc
acttgactcattttattaatttcattgaaaatgactttttcatagaatag
attttattcgtgtttttccctctctctcagatcctcctgacctgcctaac
ttcatgttctctaactttgtttctctgttttctcttttctcaaacaacaa
caaagaaaaccacaacacacacacacacacacacacacacactcacacac
acacacacgcacacgcacacgcacatgcacacgccccagacacagaaaag
aaaatcaaaacaaaaagcaaagaggaagagaggaaaaaaaaaacagcaaa
tgcaggcaggcgtggtgctcatgcctttattcccagcacctcggggaggc
agaggcaggcagatttctgaagttggaggccagcctggtctacagagtgg
agtttcaggacaagccaaggctactacagagaaacccttgtctcgaaaaa
caaaccaaccacccaaacaacaactaacaacagcaaaatgaaatttttta
aagagtcccacaaaatcctatttagtttctttgggggggtttggg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcaagggtgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcagtctggcagttcctc
agaaaattggacatagtactaccagaggatccagcaatacctctcctggg
catatatccagaatatgtcccaaccgataagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtgatacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctaacca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
aggaattctcacaatatgtactcactgataagtggatattagtccaaaac
ctaggatacccaagatataagatacaatttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagaattggga
acaaaacacccatggaaggagttatagagacaacgtttggagctaagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcttccaaacgctgacaccattgcatacactagcaagattttgctgat
aggacccagatgtagctgtctcttgtgagactatgcccgggcctagcaaa
cacagaagtggatgctcacagtcagctattggatggatcacagggctccc
aatggaggagctagagaaagtacccaggagcttaaggatctgcaacccta
tagtggaacaacattatgacttaccagtatcccgagctcttgactctagc
tgcatatttatcaaagaatgccctagtcggccatcactgtaataagagcc
attgaccgcaacctgtattgcccagtcagtgcatgcatgtcctaaaaatg
gaatgagggtaggtatgtggcgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_58723368_58724559
seq2: B6Ng01-096F18.b_46_1240

seq1  GAATTCTGCCTCAGCGGAATCAGCTGAATTTTAAGGATGTGAAATCGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCTCAGCGGAATCAGCTGAATTTTAAGGATGTGAAATCGTGT  50

seq1  GTTTTTGTTTTTGTTTTTTTAATTTGCTCACTTCCTTTATTCTAGTAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTTTTTGTTTTTTTAATTTGCTCACTTCCTTTATTCTAGTAAAC  100

seq1  ATGACTACTCTTTGTAAACCCTCACTATTCCCTAGACTCCAGCCTCAACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTACTCTTTGTAAACCCTCACTATTCCCTAGACTCCAGCCTCAACG  150

seq1  AAGATTCGGTTCCCAATCATAATGGAACTCCTCACTAACATTCCAATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCGGTTCCCAATCATAATGGAACTCCTCACTAACATTCCAATTCA  200

seq1  TTAAGAAATTATAGAAATTTAGCTGTTGGCTTATAATTCCAGATGGCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAATTATAGAAATTTAGCTGTTGGCTTATAATTCCAGATGGCTGA  250

seq1  CTTGAAATTATGATAATTACAATAAGTAGTTGAAAGACTCAATAAGTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAATTATGATAATTACAATAAGTAGTTGAAAGACTCAATAAGTTCA  300

seq1  AATGCCAGAAAGAATAGTTTAAACAGAACGTAGAGCTATTGATTTGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAGAAAGAATAGTTTAAACAGAACGTAGAGCTATTGATTTGAAAG  350

seq1  GCTCCTTTGTGCTGTCTTTCTGTATCTGTCTTGTCTTTCCTTCCAGCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTTGTGCTGTCTTTCTGTATCTGTCTTGTCTTTCCTTCCAGCCAT  400

seq1  CCTTGTGAGGTTTTGCTCCTGGCCAACAGCAGTCTGCACACAGCTGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGAGGTTTTGCTCCTGGCCAACAGCAGTCTGCACACAGCTGGATG  450

seq1  TGGCGTAACCTCATGCACCAATCAGAACTGAGCATTCGCCTTGGGTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGTAACCTCATGCACCAATCAGAACTGAGCATTCGCCTTGGGTTCTT  500

seq1  ACATCTTGCTGTATTTGAACTTGTGATAGAAATAAAGATTAATAAGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTGCTGTATTTGAACTTGTGATAGAAATAAAGATTAATAAGACAC  550

seq1  TTAAAGTCTCAACCCCAAGCTTCCTGGTGACATGGCACCCTGTTAGTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTCTCAACCCCAAGCTTCCTGGTGACATGGCACCCTGTTAGTTAT  600

seq1  GTGTTTGTTTTGAGTTTCTTACAAATTCTATTTATGAATTATTTAGTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGTTTTGAGTTTCTTACAAATTCTATTTATGAATTATTTAGTGCC  650

seq1  ACTTGACTCATTTTATTAATTTCATTGAAAATGACTTTTTCATAGAATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACTCATTTTATTAATTTCATTGAAAATGACTTTTTCATAGAATAG  700

seq1  ATTTTATTCGTGTTTTTCCCTCTCTCTCAGATCCTCCTGACCTGCCTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTCGTGTTTTTCCCTCTCTCTCAGATCCTCCTGACCTGCCTAAC  750

seq1  TTCATGTTCTCTAACTTTG-TTCTCTGTTTTCTC-TTTCTCAAACAACAA  798
      ||||||||||||||||||| |||||||||||||| |||||||||||||||
seq2  TTCATGTTCTCTAACTTTGTTTCTCTGTTTTCTCTTTTCTCAAACAACAA  800

seq1  CAAAGAAAACCACAACACACACACACACACACACACACACACACACACAC  848
      ||||||||||||||  |||||||||||||||||||||||||||| |||||
seq2  CAAAGAAAACCACA--ACACACACACACACACACACACACACACTCACAC  848

seq1  ACACACACACGCACACGCACACGCACATGCACACGCCCCAGACACAAGAA  898
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACACACACACGCACACGCACACGCACATGCACACGCCCCAGACAC-AGAA  897

seq1  AAGAAAATCAAAACAAAAAGCAAAAGAGGAAGAGAGGAAAAAAAAAACAG  948
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAGAAAATCAAAACAAAAAGC-AAAGAGGAAGAGAGGAAAAAAAAAACAG  946

seq1  CAAAATGCAGGCAGGCGTGGTGCTCATGCCTTTAATCCCAGCA-CTC-GG  996
      | |||||||||||||||||||||||||||||||| |||||||| ||| ||
seq2  C-AAATGCAGGCAGGCGTGGTGCTCATGCCTTTATTCCCAGCACCTCGGG  995

seq1  GAGGCAGAGGCAGGCAGATTTCTG-AGTTGGAGGCCAGCCTGGTCTACAG  1045
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGGCAGATTTCTGAAGTTGGAGGCCAGCCTGGTCTACAG  1045

seq1  AGT-GAGTTCCAGGAC-AGCCAAGGCTAC-ACAGAGAAACCC-TGTCTCG  1091
      ||| ||||| |||||| |||||||||||| |||||||||||| |||||||
seq2  AGTGGAGTTTCAGGACAAGCCAAGGCTACTACAGAGAAACCCTTGTCTCG  1095

seq1  AAAAACCAACCAACCAACCAAACAAACAAACAAACAACCAGCAAAATGAA  1141
      |||||| ||||||||| ||||||||   ||| ||||| ||||||||||||
seq2  AAAAACAAACCAACCACCCAAACAA--CAACTAACAA-CAGCAAAATGAA  1142

seq1  ATTTTTTAAAAAGT-CCACAAAATACTATTTAGTTT-TTTTGGGGGTTTT  1189
      |||||||||| ||| ||||||||| ||||||||||| ||| ||||| |||
seq2  ATTTTTTAAAGAGTCCCACAAAATCCTATTTAGTTTCTTTGGGGGGGTTT  1192

seq1  GGG  1192
      |||
seq2  GGG  1195