BAC Information

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BAC

Clone NameB6Ng01-097F23
Chromosome18 (Build37)
Map Location 33,688,785 - 33,689,477
singlet/doubletsinglet
Overlap genenone
Upstream geneGypc, LOC100041160, LOC100041170, Tslp, Wdr36, Camk4, Stard4, EG433170, D0H4S114, ENSMUSG00000073610
Downstream geneLOC666281, LOC100041258, Epb4.1l4a, EG666296, Ppia-ps18_318.1, Ppia-ps18_319.1, LOC666313, Apc, Srp19, Reep5, Pkd2l2, 2610024E20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097F23.bB6Ng01-097F23.g
ACCDH907767DH907768
length6931,128
definitionDH907767|Mus musculus domesticus DNA, BAC clone: B6Ng01-097F23, 5' end.DH907768|Mus musculus domesticus DNA, BAC clone: B6Ng01-097F23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttattgcctagaggagagtgaatcttttctctagggcccacggt
ggtttcttatgaaaagttgtccctcataaaaagtagcgatgccttctgca
tatattgagcgtcttggctgctttgagagcgcacttgatgagcatctccc
gtggatgaggggacgctgctacaaacagctactgatgtaagtggtaccca
gaatatgtacttcctacccatcagtttagtgccagggaatggtgtggaag
gccagaaaggatacattgggatacaaatttttttccctgatttcacttca
gtagtgcaataagataaggtcattgtcagagtcacgtttaaaaaaatggc
tacacaatgcccaagttgccaggaaaccacactttctcccaggatgcgag
ggcgtccatttacttccatttacttccatttactgtgattttgcatgaaa
tgcccatgtcagttgtcattcaggttgaatgacatattcactctccagcg
actccattcattgtcagaagcataataaatactttttaggaaggttcctg
cagaattttaaatggtgtttccatgatgagtgtggtatttttacacattg
atctgaaatatcctattgctttttttgatattttgtttctagcctacagg
aaaaattaaaagatagagtatgtataaggagagaagaaggagg
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaaagggtttatct
atcttgttgattttctaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctaggg
cttttagatgtgttgtcaagctgctaggattgtgctgtctcccgtttctc
ttggaagcactcagcggctaatgagttccctcttagaaatgcttttcatg
tgtcccatagggttgggtacgttgggccttcattcattaactcctaaaag
tccttaaatttcttctaatctcctggaccaaggatcattgaaaagaaggt
ttatcaagttcacgcgaatgttgggcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_33688785_33689477
seq2: B6Ng01-097F23.b_48_740

seq1  GAATTCTTATTGCCTAGAGGAGAGTGAATCTTTTCTCTAGGGCCCACGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTGCCTAGAGGAGAGTGAATCTTTTCTCTAGGGCCCACGGT  50

seq1  GGTTTCTTATGAAAAGTTGTCCCTCATAAAAAGTAGCGATGCCTTCTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTTATGAAAAGTTGTCCCTCATAAAAAGTAGCGATGCCTTCTGCA  100

seq1  TATATTGAGCGTCTTGGCTGCTTTGAGAGCGCACTTGATGAGCATCTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGAGCGTCTTGGCTGCTTTGAGAGCGCACTTGATGAGCATCTCCC  150

seq1  GTGGATGAGGGGACGCTGCTACAAACAGCTACTGATGTAAGTGGTACCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGAGGGGACGCTGCTACAAACAGCTACTGATGTAAGTGGTACCCA  200

seq1  GAATATGTACTTCCTACCCATCAGTTTAGTGCCAGGGAATGGTGTGGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGTACTTCCTACCCATCAGTTTAGTGCCAGGGAATGGTGTGGAAG  250

seq1  GCCAGAAAGGATACATTGGGATACAAATTTTTTTCCCTGATTTCACTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAAAGGATACATTGGGATACAAATTTTTTTCCCTGATTTCACTTCA  300

seq1  GTAGTGCAATAAGATAAGGTCATTGTCAGAGTCACGTTTAAAAAAATGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGCAATAAGATAAGGTCATTGTCAGAGTCACGTTTAAAAAAATGGC  350

seq1  TACACAATGCCCAAGTTGCCAGGAAACCACACTTTCTCCCAGGATGCGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAATGCCCAAGTTGCCAGGAAACCACACTTTCTCCCAGGATGCGAG  400

seq1  GGCGTCCATTTACTTCCATTTACTTCCATTTACTGTGATTTTGCATGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTCCATTTACTTCCATTTACTTCCATTTACTGTGATTTTGCATGAAA  450

seq1  TGCCCATGTCAGTTGTCATTCAGGTTGAATGACATATTCACTCTCCAGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGTCAGTTGTCATTCAGGTTGAATGACATATTCACTCTCCAGCG  500

seq1  ACTCCATTCATTGTCAGAAGCATAATAAATACTTTTTAGGAAGGTTCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATTCATTGTCAGAAGCATAATAAATACTTTTTAGGAAGGTTCCTG  550

seq1  CAGAATTTTAAATGGTGTTTCCATGATGAGTGTGGTATTTTTACACATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTTTAAATGGTGTTTCCATGATGAGTGTGGTATTTTTACACATTG  600

seq1  ATCTGAAATATCCTATTGCTTTTTTTGATATTTTGTTTCTAGCCTACAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAATATCCTATTGCTTTTTTTGATATTTTGTTTCTAGCCTACAGG  650

seq1  AAAAATTAAAAGATAGAGTATGTATAAGGAGAGAAGAAGGAGG  693
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAAAAGATAGAGTATGTATAAGGAGAGAAGAAGGAGG  693