BAC Information

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BAC

Clone NameB6Ng01-098M24
Chromosome18 (Build37)
Map Location 50,997,569 - 50,998,658
singlet/doubletsinglet
Overlap genenone
Upstream geneDmxl1, Tnfaip8, Hsd17b4, LOC626721, LOC667233, Gm93, Hdhd1a, LOC100042373
Downstream geneLOC100042385, Prr16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098M24.bB6Ng01-098M24.g
ACCDH908788DH908789
length1,0751,139
definitionDH908788|Mus musculus domesticus DNA, BAC clone: B6Ng01-098M24, 5' end.DH908789|Mus musculus domesticus DNA, BAC clone: B6Ng01-098M24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaccttatagacattgacactttattagcacatcttgcaaaga
gaaactttccacgaacccaagtaggactgcataagttctaataataagta
gtagtaaaaattaaaatactgtttttatttttataccaaactaatgaata
tgcataatcttttaaaaatatatgatctgatagctatgaggagctgaaac
ctcacttagtgtaaaaatatctcctattctaagcaaataagggcttgcct
tgatggtgaagctcagcaggactctttaaaacatcattttgaataaatca
agaatttagcacacaaagaacaactgaatttatttataaactgattgaaa
cagggatttcagatttttgggacagaaatttttctgtagaaaattttgga
gcccttatgagagtagggtttggatattatataccaccaagattaatatg
ctattctgttagatgaaaaatattgtcgtaaatggatgatggctctcaaa
cctaaaatcttctatggccttaacatgctacctgctaatatataggcaat
tcctccaggaataaaaacatcctgaaattcaattcactaaatgagtccct
caactgtgctcttaaaaaatattctgaactctaattgattctgtaaatgt
tccagcagaaagctttctgcatgttaaataggatgttggccagccaggat
ccccaacaattttgccagggtaagtaaacctaagagagatgttggcagcc
atccccagtgaggttttcctaagcctacaagaatgcctttaaatcccgca
actggttgaaaatagctcttcagatattcacactttccaatacctcattt
tcctcccaacttgatttataacatctcagttcatttgctttcaaccccaa
ataaacttactgaggattctaaggaaaatgtaaagacacctagggatctg
agagagaaccggataacaaagtactttgagacatgggaaacctgcagtag
aattgcaggagaaacatgcagatttccttgaataggaatgctggattcat
taataagagcgctggatagaggggg
gaattctcacctgaggaataccaaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatcccgcaatacctctcctgggc
atatatccagaagatgttccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaagttcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgttaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagccaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcagattttattgaaag
ggacccagatgtagctgtctcttgtgaggactatgccggggccttagcaa
acacagaagtgggatgctcacagtcagctaaatggatggatcattagggc
tccaaatggaggagctagagaaagtagcccaaggagcttaagggaatctt
gcactctatagtgaacaacataatgaacttaaccagtacccggagctctg
acctctagctgcattataatatacaaaaggatggcctagtcggccattca
ctggaagagaaggcctattgggaacttgcctacctataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_50997569_50998658
seq2: B6Ng01-098M24.b_47_1121

seq1  GAATTCTTACCTTATAGACATTGACACTTTATTAGCACATCTTGCAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACCTTATAGACATTGACACTTTATTAGCACATCTTGCAAAGA  50

seq1  GAAACTTTCCACGAACCCAAGTAGGACTGCATAAGTTCTAATAATAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTTTCCACGAACCCAAGTAGGACTGCATAAGTTCTAATAATAAGTA  100

seq1  GTAGTAAAAATTAAAATACTGTTTTTATTTTTATACCAAACTAATGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAAAAATTAAAATACTGTTTTTATTTTTATACCAAACTAATGAATA  150

seq1  TGCATAATCTTTTAAAAATATATGATCTGATAGCTATGAGGAGCTGAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAATCTTTTAAAAATATATGATCTGATAGCTATGAGGAGCTGAAAC  200

seq1  CTCACTTAGTGTAAAAATATCTCCTATTCTAAGCAAATAAGGGCTTGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTAGTGTAAAAATATCTCCTATTCTAAGCAAATAAGGGCTTGCCT  250

seq1  TGATGGTGAAGCTCAGCAGGACTCTTTAAAACATCATTTTGAATAAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGTGAAGCTCAGCAGGACTCTTTAAAACATCATTTTGAATAAATCA  300

seq1  AGAATTTAGCACACAAAGAACAACTGAATTTATTTATAAACTGATTGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTAGCACACAAAGAACAACTGAATTTATTTATAAACTGATTGAAA  350

seq1  CAGGGATTTCAGATTTTTGGGACAGAAATTTTTCTGTAGAAAATTTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATTTCAGATTTTTGGGACAGAAATTTTTCTGTAGAAAATTTTGGA  400

seq1  GCCCTTATGAGAGTAGGGTTTGGATATTATATACCACCAAGATTAATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTATGAGAGTAGGGTTTGGATATTATATACCACCAAGATTAATATG  450

seq1  CTATTCTGTTAGATGAAAAATATTGTCGTAAATGGATGATGGCTCTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTGTTAGATGAAAAATATTGTCGTAAATGGATGATGGCTCTCAAA  500

seq1  CCTAAAATCTTCTATGGCCTTAACATGCTACCTGCTAATATATAGGCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAATCTTCTATGGCCTTAACATGCTACCTGCTAATATATAGGCAAT  550

seq1  TCCTCCAGGAATAAAAACATCCTGAAATTCAATTCACTAAATGAGTCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAGGAATAAAAACATCCTGAAATTCAATTCACTAAATGAGTCCCT  600

seq1  CAACTGTGCTCTTAAAAAATATTCTGAACTCTAATTGATTCTGTAAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTGCTCTTAAAAAATATTCTGAACTCTAATTGATTCTGTAAATGT  650

seq1  TCCAGCAGAAAGCTTTCTGCATGTTAAATAGGATGTTGGCCAGCCAGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCAGAAAGCTTTCTGCATGTTAAATAGGATGTTGGCCAGCCAGGAT  700

seq1  CCCCAACAATTTTGCCAGGGTAAGTAAACCTAAGAGAGATGTTGGCAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACAATTTTGCCAGGGTAAGTAAACCTAAGAGAGATGTTGGCAGCC  750

seq1  ATCCCCAGTGAGGTTTTCCTAAGCCTACAAGAATGCCTTTAAATCCCGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAGTGAGGTTTTCCTAAGCCTACAAGAATGCCTTTAAATCCCGCA  800

seq1  ACTGG-TGAAAATAGCTCTTCAGATATTCACACTTTCCAATACCTCATTT  849
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTGAAAATAGCTCTTCAGATATTCACACTTTCCAATACCTCATTT  850

seq1  TCCTCCCAACTTGATTTATAACATCTCAGTTCATTTGCTTTCAACCCCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCAACTTGATTTATAACATCTCAGTTCATTTGCTTTCAACCCCAA  900

seq1  ATAAACTTACTGAGGATTCTAAGGAAAATGTAAAGACAACCTAGGGATTC  949
      ||||||||||||||||||||||||||||||||||||| ||||||||| ||
seq2  ATAAACTTACTGAGGATTCTAAGGAAAATGTAAAGAC-ACCTAGGGA-TC  948

seq1  TGAGAAGAGAAACGGATAAACAAAAGTAACTTTGAGACATTGGGAAAACC  999
      |||| |||||| |||||||   ||||| ||||||||||||  || |||||
seq2  TGAG-AGAGAACCGGATAA--CAAAGT-ACTTTGAGACAT--GGGAAACC  992

seq1  TGCAGTAGAATTGCAGGAGAAACAATGCAGATTTCCTTGAATAAGGAAAT  1049
      ||||||||||||||||||||||| |||||||||||||||||||  | |||
seq2  TGCAGTAGAATTGCAGGAGAAAC-ATGCAGATTTCCTTGAATA--GGAAT  1039

seq1  GCTGGATTCAATTAATAAAGAGGCGGCTGGAGAAGAGGGGG  1090
      ||||||||| |||||| |||||   ||||||  ||||||||
seq2  GCTGGATTC-ATTAAT-AAGAG--CGCTGGA-TAGAGGGGG  1075