BAC Information

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BAC

Clone NameB6Ng01-099A20
Chromosome18 (Build37)
Map Location 87,495,534 - 87,496,109
singlet/doubletsinglet
Overlap genenone
Upstream geneNeto1, Cbln2, LOC100039872, LOC100039881, LOC665437, LOC435580, LOC546719, LOC383318
Downstream genePpia-ps18_1039.1, LOC329008, LOC100039961, LOC100039972
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099A20.bB6Ng01-099A20.g
ACCDH908957DH908958
length966576
definitionDH908957|Mus musculus domesticus DNA, BAC clone: B6Ng01-099A20, 5' end.DH908958|Mus musculus domesticus DNA, BAC clone: B6Ng01-099A20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctttaaaaaatcattcttagtgaactgagtccctggaagatgaa
tgctttgctcagtaatcaatagaaaaggatcctcttgcaatagatgtaat
gaacacagttatcagcagccagacaataagcagagagtgagagtccctag
aacatacagccccaaattagatgtctcggtgcaccctgtaggagaggagt
ttgtgagagtgaggagatagagtggaaggaagacatcaaataaataagat
cctctgaatctgctagatacaccatgacacacagaatctgaagcagcatg
cattgagcctgatagagtctggaccagatggagtcttagagctggaagga
gaagcagactcaggccctttaagtaacccacacgctatcactaattgaaa
actacttacaaatgaaaatttagtttttttttccccaggaattctcactg
gagaaagaaaccactcttaaaggtagggtgcatgaccagcaataaatagg
taacagaaaacaaactcaagggcatctctcgagattctttttcatggcaa
ggctttttaaaaaatactcttaaaatattatcctaatttattatatatat
gtatatgcatatatggtatatcaattatatacaaaccatttttctgtcgt
ttttatcctataggtcctaaatcaattatattatggcttccagtttagtg
ttgctatgagattcagtgggactctgtgtctatgactgtttctttttgcc
tccttttgggttcttttccttctgtttgtttgaccaattccaatgtttca
attcttgttttatcttattgtattatatttattttgatattatctcttag
aaacctgttcgtttctgataagagacagaacagtggtagatcttgaatgg
gagaggaggtactgaggaactgggatgaaagaaaagggataattatctgt
atggtatattatatga
gaattcataagaaaaactatacagacataaacacattgtgacctaaacac
agtgattaattcacttcatatcttctcacatattttaaatcattttattt
ttgtatttggagacagaggcacaaaatattgtgcccacaggtgttgacct
gagtgtgctcctgcatccccttcccgaaggctgagacttcagtcttgtac
caccacaccagctctctaataccgttcactggatttctcaagaaccctcc
tattgggttcatgctatctcctctatactaataattttggataaacactt
atatgtgtatataatatttcaagcaatacttttcctgtactttatataag
tccacacaagtacatcagtcatctctaacatcaggcaacatagcaggcat
gtaattatggttctttgaaccaaaaatactgtaagaagctaatacacata
aacacatggactatatgtgtgtgtgtacatacagtccatatatacacata
ggccatatatacatttatttgtatatatatatatatatatatatatatat
atatatatgtatgtatatatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_87495534_87496109
seq2: B6Ng01-099A20.g_66_641

seq1  GAATTCATAAGAAAAACTATACAGACATAAACACATTGTGACCTAAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAGAAAAACTATACAGACATAAACACATTGTGACCTAAACAC  50

seq1  AGTGATTAATTCACTTCATATCTTCTCACATATTTTAAATCATTTTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTAATTCACTTCATATCTTCTCACATATTTTAAATCATTTTATTT  100

seq1  TTGTATTTGGAGACAGAGGCACAAAATATTGTGCCCACAGGTGTTGACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTGGAGACAGAGGCACAAAATATTGTGCCCACAGGTGTTGACCT  150

seq1  GAGTGTGCTCCTGCATCCCCTTCCCGAAGGCTGAGACTTCAGTCTTGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGCTCCTGCATCCCCTTCCCGAAGGCTGAGACTTCAGTCTTGTAC  200

seq1  CACCACACCAGCTCTCTAATACCGTTCACTGGATTTCTCAAGAACCCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACACCAGCTCTCTAATACCGTTCACTGGATTTCTCAAGAACCCTCC  250

seq1  TATTGGGTTCATGCTATCTCCTCTATACTAATAATTTTGGATAAACACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGGTTCATGCTATCTCCTCTATACTAATAATTTTGGATAAACACTT  300

seq1  ATATGTGTATATAATATTTCAAGCAATACTTTTCCTGTACTTTATATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGTATATAATATTTCAAGCAATACTTTTCCTGTACTTTATATAAG  350

seq1  TCCACACAAGTACATCAGTCATCTCTAACATCAGGCAACATAGCAGGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACAAGTACATCAGTCATCTCTAACATCAGGCAACATAGCAGGCAT  400

seq1  GTAATTATGGTTCTTTGAACCAAAAATACTGTAAGAAGCTAATACACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTATGGTTCTTTGAACCAAAAATACTGTAAGAAGCTAATACACATA  450

seq1  AACACATGGACTATATGTGTGTGTGTACATACAGTCCATATATACACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATGGACTATATGTGTGTGTGTACATACAGTCCATATATACACATA  500

seq1  GGCCATATATACATTTATTTGTATATATATATATATATATATATATATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATATATACATTTATTTGTATATATATATATATATATATATATATAT  550

seq1  ATATATATGTATGTATATATATATAT  576
      ||||||||||||||||||||||||||
seq2  ATATATATGTATGTATATATATATAT  576